BAC Information

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BAC

Clone NameB6Ng01-015N23
Chromosome13 (Build37)
Map Location 17,892,407 - 17,893,440
singlet/doubletsinglet
Overlap geneCdc2l5
Upstream gene5033411D12Rik, 2810021B07Rik
Downstream geneRala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2, Vps41
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-015N23.bB6Ng01-015N23.g
ACCDH850013DH850014
length5631,033
definitionDH850013|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N23, 5' end.DH850014|Mus musculus domesticus DNA, BAC clone: B6Ng01-015N23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tcacctgaggaatactgaatggcagagaaacacctgaaaaaaatgttcaa
catccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccac
ttcactccagtcagaatggctaagatcaaaaactcaggtgacagcagatg
ctggcgaggatgtggagaaaggggaacactcctccattgttggtgggatt
gcaagcttgtacaaccactctggaaatcagtctggcggttcctcagaaaa
ttggacatagtactactggaggatcctgcaatacctctcctgggcatata
gccagaagatgtcccaaccggtaagaaggacacatgctccactatgttca
tagcagccttatttataatagccagaagctggaaagaacccagatgcccc
tcaacagaggaatggatacagaaaatgtggtacatttacacaatggaata
ctactcagctattaaaaaaaagaatttatgaaatgcctgtttgttttcta
acgagacagaatgggtatggaaccagataggaggaaaggtggggaggaat
tgagaggaatagg

gaattcaaactgaccttgatgcaaagcacttacatttttgaagcatttgt
ttcatattccatcagcaaatcactcaagttttgggggtatttgtttccta
atccatcagtgggaacaatcaccacacagagcactgcactcagcaccctt
ctatttccttgtattaacactcctcacatttattatagggcttatcagga
agatgataagaatgtacacacctcaacaatcaaagagtgaagaggcatct
ttagtcccatagctcaggaggcaaaggcaggtggatctgagttgggaggc
cagcctggactacagaacacaggaaagaacctacctggaaaaaacaaaaa
agaaaaatacagtaaacagcttttgaggagaaattaagccaagaagatcc
atccaatgaaatgcaggagctaagaaatgaagacacaaatgcaggcaaag
agcatgttgtatggtagtcccttgaacagagaatttattctatgagttat
cagttacgctctgggacatgatttcaatactatattgagtatggatacac
ttcctttaaaaaaatctacatgggtaattcatcagtatgtgggcttggaa
aatgtcatattgaagtttcttataccatagcacgttgtctatattaatta
tttattcaaatgaagcaggtaatagagagtcacagtggtagattctatgt
tcagtcaactctatctatcatcccttcacttacctattcaacgattatta
agagtgtataaccacccaaatacagtgctgagcactaggaattcaatgat
ggggaagacaggccagatgccacttgtggagcttacaatctcgtctattc
attaaagagccagtcatctgactctactactaaacctagaaacaaataaa
atttttgcattaagctggacaagtgaattcatgttcctcagcagtaagta
cattgctatttttctaatcttgttttttcaagtaacttatttagtcatca
attctggtcttcaaattttaggaatagcattta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17892407_17893440
seq2: B6Ng01-015N23.g_68_1100

seq1  GAATTCAAACTGACCTTGATGCAAAGCACTTACATTTTTGAAGCATTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGACCTTGATGCAAAGCACTTACATTTTTGAAGCATTTGT  50

seq1  TTCATATTCCATCAGCAAATCACTCAAGTTTTGGGGGTATTTGTTTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTCCATCAGCAAATCACTCAAGTTTTGGGGGTATTTGTTTCCTA  100

seq1  ATCCATCAGTGGGAACAATCACCACACAGAGCACTGCACTCAGCACCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCAGTGGGAACAATCACCACACAGAGCACTGCACTCAGCACCCTT  150

seq1  CTATTTCCTTGTATTAACACTCCTCACATTTATTATAGGGCTTATCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCCTTGTATTAACACTCCTCACATTTATTATAGGGCTTATCAGGA  200

seq1  AGATGATAAGAATGTACACACCTCAACAATCAAAGAGTGAAGAGGCATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATAAGAATGTACACACCTCAACAATCAAAGAGTGAAGAGGCATCT  250

seq1  TTAGTCCCATAGCTCAGGAGGCAAAGGCAGGTGGATCTGAGTTGGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCCCATAGCTCAGGAGGCAAAGGCAGGTGGATCTGAGTTGGGAGGC  300

seq1  CAGCCTGGACTACAGAACACAGGAAAGAACCTACCTGGAAAAAACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGACTACAGAACACAGGAAAGAACCTACCTGGAAAAAACAAAAA  350

seq1  AGAAAAATACAGTAAACAGCTTTTGAGGAGAAATTAAGCCAAGAAGATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATACAGTAAACAGCTTTTGAGGAGAAATTAAGCCAAGAAGATCC  400

seq1  ATCCAATGAAATGCAGGAGCTAAGAAATGAAGACACAAATGCAGGCAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATGAAATGCAGGAGCTAAGAAATGAAGACACAAATGCAGGCAAAG  450

seq1  AGCATGTTGTATGGTAGTCCCTTGAACAGAGAATTTATTCTATGAGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGTTGTATGGTAGTCCCTTGAACAGAGAATTTATTCTATGAGTTAT  500

seq1  CAGTTACGCTCTGGGACATGATTTCAATACTATATTGAGTATGGATACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACGCTCTGGGACATGATTTCAATACTATATTGAGTATGGATACAC  550

seq1  TTCCTTTAAAAAAATCTACATGGGTAATTCATCAGTATGTGGGCTTGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTAAAAAAATCTACATGGGTAATTCATCAGTATGTGGGCTTGGAA  600

seq1  AATGTCATATTGAAGTTTCTTATACCATAGCACGTTGTCTATATTAATTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCATATTGAAGTTTCTTATACCATAGCACGTTGTCTATATTAATTA  650

seq1  TTTATTCAAATGAAGCAGGTAATAGAGAGTCACAGTGGTAGATTCTATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAAATGAAGCAGGTAATAGAGAGTCACAGTGGTAGATTCTATGT  700

seq1  TCAGTCAACTCTATCTATCATCCCTTCACTTACCTATTCAACGATTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCAACTCTATCTATCATCCCTTCACTTACCTATTCAACGATTATTA  750

seq1  AGAGTGTATAACCACCCAAATACAGTGCTGAGCACTAGGAATTCAATGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTATAACCACCCAAATACAGTGCTGAGCACTAGGAATTCAATGAT  800

seq1  GGGGAAGACAGGCCAGATGCCACTTGTGGAGCTTACAATCTCGTCTATTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGACAGGCCAGATGCCACTTGTGGAGCTTACAATCTCGTCTATTC  850

seq1  ATTAAAGAGCCAGTCATCTGACTCTACTACTAAACCTAGAAACAAATAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAGCCAGTCATCTGACTCTACTACTAAACCTAGAAACAAATAAA  900

seq1  ACTTTTTGCATTAAGCTGGACAAGTGAATTCATGTTCCTCAGCAGTAAGT  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-TTTTTGCATTAAGCTGGACAAGTGAATTCATGTTCCTCAGCAGTAAGT  949

seq1  ACATTTGCTATTTTTCTAAATCTTG-TTTTTCAAGTAAC-TATTTAGTCA  998
      ||| ||||||||||||| ||||||| ||||||||||||| ||||||||||
seq2  ACA-TTGCTATTTTTCT-AATCTTGTTTTTTCAAGTAACTTATTTAGTCA  997

seq1  TCAATTCTGGTCCTCAAATTTTAAGAATAGCATTTA  1034
      |||||||||||| |||||||||| ||||||||||||
seq2  TCAATTCTGGTCTTCAAATTTTAGGAATAGCATTTA  1033


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