BAC Information

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BAC

Clone NameB6Ng01-017B22
Chromosome13 (Build37)
Map Location 13,548,748 - 13,702,751
singlet/doubletdoublet
Overlap geneNid1, Lyst
Upstream geneLgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960
Downstream geneLOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2, Tbce, Ggps1, LOC100040243, Arid4b, LOC100039916, Hecw1, Mrpl32
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017B22.bB6Ng01-017B22.g
ACCDH850892DH850893
length1,138894
definitionDH850892|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B22, 5' end.DH850893|Mus musculus domesticus DNA, BAC clone: B6Ng01-017B22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,702,222 - 13,702,751)(13,548,748 - 13,549,640)
sequence
gaattcatctagactagccagaggtcctagatctcctctcttgccttggg
cttcaattttcttttatgtttcttactttcatcttcattagtcggcctac
agatcattctctcctagtcagagaaaacgaagaatggaagctgagaactt
tttcttattctttgaattcaattacagggtcagtttgttaacaatttatt
tgtagaatgtgtttttgagtcttgtttatgaatattatatggtttcatat
ccttcttccttctgcacatgctattttaaaatcagtctatttgcctcatt
tattttcctatctctttgtccttcatgtatttccagttgttccattaaaa
acactatgactgctatatgattacttttgtttccagagtctatatccatg
gcatcttatttatattttctttaaaccttacaaacttattttttatttta
attttattattattgtatttgaacatatgcctttgttatttttctattgt
tgctaagtgacactatgaccaaggcaacttacagacaagtttcttggggc
ttacggtttcaaagggtgagcccatggccatcacgactaggagtatggca
gtaggcaggcaggcatggcccaggaacagaatctagcagcttatatctga
tccacaagcaggaggcagaaagagtgctaactaggaatggtatggtcttc
tccaacttcaaagctcacctccctactctgacccccagtgacgtatctcc
tctctcaagtccatacctcttctttccaaacagtttcatcaatcaagaac
caagtattcaaatatgagcctatggcaatcattctcatccaaaccatgta
tgcacacatctcatggcatatatgtagaggtcagaggacaattgtgtaca
gtcagttctctgtctacctttacaagcattctaagattgaattcaggtca
tgaggctcatgtggcaaatgcttctacctgctagtcatttctcatgtgcc
tgaacccatactcaatttgctgtatccagctgtgggggctaatcttggca
tttttatggaacttgtggaactcaggacttctgagtaatctaggcgtttc
ccagaagattggatctggagggtttccgacccaatcac
gaattctctagggcagtatctgcgttggtccacatgctggaagtggatgg
ttttcagtgaattcgtttttactctgtagtacaaagtcatcaaatatgtt
tcttaggcaatgttttgtgagtttgagttaagttgtcactggaattttca
gggaaagagggctccaggagtcccccaaacccaaggcacccatctacaat
aaatagaagagatttagtaatgctaaaaggtagagaaaagaggttcactc
aacgtggccacacttgggggaggggcagataaagggtactgtggccctct
actttctaggtgctgatgtgagctttagattcaacagagaaagagagcag
ggagcaggagttctgtgatttaacaatgccaatgtgggtgtgagcttgct
gatcatggtattcaccttggttctgtgaggtggtccaagtctttaagaag
gagtcagtctagttcctaccagatgtttactcctgctccagccatggata
gcaaccctcctctagggcatgggactaggggttgggcagggccctgtccc
aagagggtttgctactgtggaaattcagaagaacgcaagaggaaaggtta
ccgatattgacttggtctccatatcttcaggcagagtatggacaaatgaa
agcaaaaagggccaggcttctattcatttagttaatctgtgataactaag
tgactgtttccataataatataacaaccttaattattattctgtgattca
ggtggattttctcaaaaacatgttcaaactatggtatttgtgtttttgtt
gtttgcttaaaaaatctttgtgtgtatgtgttcatatatgtgtgttcata
tgtatgaaatggggtacatggatgctatggacacatgaatatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13702222_13702751
seq2: B6Ng01-017B22.b_659_1182 (reverse)

seq1  GTGATTGGGTCAG-AACCCTCCAGATCCAATTCTCTCTGGAAAACGCCTC  49
      ||||||||||| | |||||||||||||||| ||| ||||| |||||||| 
seq2  GTGATTGGGTCGGAAACCCTCCAGATCCAA-TCT-TCTGGGAAACGCCT-  47

seq1  AGATATACTCAGAAGTTCTG-GTCTCAC-AGTTCAATAAAATTGCCAAGA  97
      |||| ||||||||||| ||| ||  ||| ||||| |||||| ||||||||
seq2  AGAT-TACTCAGAAGTCCTGAGTTCCACAAGTTCCATAAAAATGCCAAGA  96

seq1  TTAGCCACCACAGCTGGGATACAGCAAATTGAGGTATGGGGTTCAGGCAC  147
      |||||| |||||||| |||||||||||||||| |||| ||||||||||||
seq2  TTAGCCCCCACAGCT-GGATACAGCAAATTGA-GTAT-GGGTTCAGGCAC  143

seq1  ATGAGAAATGACTTAGCAGGTAGAAGCATTTGCCACATGAGCCTCATGAC  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAATGAC-TAGCAGGTAGAAGCATTTGCCACATGAGCCTCATGAC  192

seq1  CTGAATTCAATCCTTAGAATGCTTGTAAAGGTAGAAAGAGAACTGACTGT  247
      ||||||||||| ||||||||||||||||||||||| ||||||||||||||
seq2  CTGAATTCAAT-CTTAGAATGCTTGTAAAGGTAGACAGAGAACTGACTGT  241

seq1  ACACAATTGTCCTCTGACCTCTACATATATGCCATGGGATGTGTGCATAC  297
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACACAATTGTCCTCTGACCTCTACATATATGCCATGAGATGTGTGCATAC  291

seq1  ATGGTTTGGATGAGAATGATTGCCATAGGCTCATATTTGAATACTTGGTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGGATGAGAATGATTGCCATAGGCTCATATTTGAATACTTGGTT  341

seq1  CTTGATTGATGAAACTGTTTGGAAAGAAGAGGTATGGACTTGAGAGAGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATTGATGAAACTGTTTGGAAAGAAGAGGTATGGACTTGAGAGAGGA  391

seq1  GATACGTCACTGGGGGTCAGAGTAGGGAGGTGAGCTTTGAAGTTGGAGAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACGTCACTGGGGGTCAGAGTAGGGAGGTGAGCTTTGAAGTTGGAGAA  441

seq1  GACCATACCATTCCTAGTTAGCACTCTTTCTGCCTCCTGCTTGTGGATCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATACCATTCCTAGTTAGCACTCTTTCTGCCTCCTGCTTGTGGATCA  491

seq1  GATATAAGCTGCTAGATTCTGTTCCTGGGCCAT  530
      |||||||||||||||||||||||||||||||||
seq2  GATATAAGCTGCTAGATTCTGTTCCTGGGCCAT  524

seq1: chr13_13548748_13549640
seq2: B6Ng01-017B22.g_69_962

seq1  GAATTCTCTAGGGCAGTATCTGCGTTGGTCCACATGCTGGAAGTGGATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGGGCAGTATCTGCGTTGGTCCACATGCTGGAAGTGGATGG  50

seq1  TTTTCAGTGAATTCGTTTTTACTCTGTAGTACAAAGTCATCAAATATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGTGAATTCGTTTTTACTCTGTAGTACAAAGTCATCAAATATGTT  100

seq1  TCTTAGGCAATGTTTTGTGAGTTTGAGTTAAGTTGTCACTGGAATTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGGCAATGTTTTGTGAGTTTGAGTTAAGTTGTCACTGGAATTTTCA  150

seq1  GGGAAAGAGGGCTCCAGGAGTCCCCCAAACCCAAGGCACCCATCTACAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGAGGGCTCCAGGAGTCCCCCAAACCCAAGGCACCCATCTACAAT  200

seq1  AAATAGAAGAGATTTAGTAATGCTAAAAGGTAGAGAAAAGAGGTTCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGAAGAGATTTAGTAATGCTAAAAGGTAGAGAAAAGAGGTTCACTC  250

seq1  AACGTGGCCACACTTGGGGGAGGGGCAGATAAAGGGTACTGTGGCCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGGCCACACTTGGGGGAGGGGCAGATAAAGGGTACTGTGGCCCTCT  300

seq1  ACTTTCTAGGTGCTGATGTGAGCTTTAGATTCAACAGAGAAAGAGAGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTAGGTGCTGATGTGAGCTTTAGATTCAACAGAGAAAGAGAGCAG  350

seq1  GGAGCAGGAGTTCTGTGATTTAACAATGCCAATGTGGGTGTGAGCTTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGAGTTCTGTGATTTAACAATGCCAATGTGGGTGTGAGCTTGCT  400

seq1  GATCATGGTATTCACCTTGGTTCTGTGAGGTGGTCCAAGTCTTTAAGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATGGTATTCACCTTGGTTCTGTGAGGTGGTCCAAGTCTTTAAGAAG  450

seq1  GAGTCAGTCTAGTTCCTACCAGATGTTTACTCCTGCTCCAGCCATGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGTCTAGTTCCTACCAGATGTTTACTCCTGCTCCAGCCATGGATA  500

seq1  GCAACCCTCCTCTAGGGCATGGGACTAGGGGTTGGGCAGGGCCCTGTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACCCTCCTCTAGGGCATGGGACTAGGGGTTGGGCAGGGCCCTGTCCC  550

seq1  AAGAGGGTTTGCTACTGTGGAAATTCAGAAGAACGCAAGAGGAAAGGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTTTGCTACTGTGGAAATTCAGAAGAACGCAAGAGGAAAGGTTA  600

seq1  CCGATATTGACTTGGTCTCCATATCTTCAGGCAGAGTATGGACAAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATATTGACTTGGTCTCCATATCTTCAGGCAGAGTATGGACAAATGAA  650

seq1  AGCAAAAAGGGCCAGGCTTCTATTCATTTAGTTAATCTGTGATAACTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAAGGGCCAGGCTTCTATTCATTTAGTTAATCTGTGATAACTAAG  700

seq1  TGACTGTTTCCATAATAATATAACAACCTTAATTATTATTCTGTGATTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTTTCCATAATAATATAACAACCTTAATTATTATTCTGTGATTCA  750

seq1  GGTGGATTTTCTCAAAAACATGTTCAAACTAGGGTATTTGTG-TTTTGTT  799
      ||||||||||||||||||||||||||||||| |||||||||| |||||||
seq2  GGTGGATTTTCTCAAAAACATGTTCAAACTATGGTATTTGTGTTTTTGTT  800

seq1  GTTTGCTTAAAAAAATCTTTGTGTGTATGTGTTCATATATGTGTGTTCAT  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCTT-AAAAAATCTTTGTGTGTATGTGTTCATATATGTGTGTTCAT  849

seq1  ATGTATG-AATGGGGTACATGGATGCCATGGTACACATGAA-ATCA  893
      ||||||| |||||||||||||||||| |||| ||||||||| ||||
seq2  ATGTATGAAATGGGGTACATGGATGCTATGG-ACACATGAATATCA  894