BAC Information

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BAC

Clone NameB6Ng01-018D22
Chromosome13 (Build37)
Map Location 107,986,859 - 107,987,951
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr717-ps1, LOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322
Downstream geneLOC100040350, LOC100040366, Apoo, AI197445, LOC100040820, Zswim6, 3021401N23Rik, 2810008M24Rik, Ndufa12l, Ercc8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018D22.bB6Ng01-018D22.g
ACCDH851703DH851704
length1,0041,084
definitionDH851703|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D22, 5' end.DH851704|Mus musculus domesticus DNA, BAC clone: B6Ng01-018D22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttaaaaccttctgaccttgggtttttttgggggccagggg
tgcttttaatgactgcttctatttcactagggcttataggtctattcaaa
ttgcttatctgatcttgctttaactgtgacaggtggtgtgcattgagaaa
accaaccatttcttacagatttttcatttttgtggaatacaggtgtttaa
agcatgtctttatgattctctggatttcctgtgttggttgtcatgtgccc
tctgctcatttctaattatgctaatttggatattctctcttcaccttttc
gttaatttggataagggtttgtcagtcttgttcatttgcccaaagaacca
acttttttgtttgtttgtattttattgatttcaaccctcagtttgattac
ttctggtcatctactcctttggggtgtgatttcttctttttgttctaaag
ctttcaagtgtgctcttaagttgctcatatgagagccctccaatttttaa
tgttcatagctttctgctctaaacttgccttttggaattgcctataatgt
gtcccataagtttgggtatatggtatattcattttcacttgattctagaa
agtatttttctttcataatttttgtcttgatccatttttttcaattgata
atgagttgttagatttctatgagtttgtaaactttctgttgttgatatct
gaccctgctggtcagatagataggatacagatagggtgttattgcaattt
tcttgtatttgttgagacttgctttgtatcagagtatgtgaccacttttg
ggaaaagtcccatgatgtgctgagaaaaacatatattctttcacgtttgg
gtagaaagctctgtaactatccattagttcgtttggtttatgacagcagt
cagcttctgcatttatctgtttagtttttgtctggatgacctgcctgtgc
tgagagaggtgctgaagtctcctcactatcagtggtttaggttgtggtgg
gtgt
gaattcaggtgcttatgttccagtgcctaacattcacatgccaagaacct
agtactttaaagtgctgcgttaatggaatccacagtatgttcaaatcatc
attctctctagccagcccagtgggaagatataaggaaatagacccatata
ttctgcttgtggtaacgtctatgattagttggtcacatcccatatccaga
aattacattgcatgcttcggtcactgaagcctcacaaaaactctgtgcat
tgctgggatcgtttttttctgtgggacagaggaggaagatgatgctcaaa
aatgctaagtgacttacccaaggtcacatgactacacagtggcagacctg
ggccgctgtaaccttttccataagacttctgatggtttgtccaaaactac
actagatttcatgaatctcatgttagattcatgttagaaaactgtctcac
tcacatgtggaacttttaaaaatcaagtcatggggagtaatcagcatgtt
ggtaggggctgcgtcagggaagaatataaaattttagttagctgcaaaaa
aaaaaaaagtaagttcgagagatctactgtacaacatagtggctatcaag
tggctataagagattttgtatttgaaatgtccaaaagtgagttgtaaatg
ttcttaccactaaatttaagtgtatcagatacatacacctttgctaatta
ctttgatttagtcatagtatacaatttgtataaatttcaaaacatcgtat
gtagcataaattcatataatcaccacttctcaatttcaataataataatt
ccgttttaaatgtgtaaatggaaacaataacttaggagccaaagaaagca
ttgaaatcagcccaagcatgagattaagttttaggacttgtattacgaag
acgcatttcattttctgtacttcctgagaacatgaagtgttctaaatgaa
acactttttccttttaaggaacaaatctagttaaacggctactctttgga
attttggggtttggggatcaggaagaatcccaacgtgtcccttaggaggg
ggcagatggaaagggctggctagacctagtaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107986859_107987951
seq2: B6Ng01-018D22.g_67_1150 (reverse)

seq1  GGGTAACTAAGTCTAGCCAGCACCTCTCCCCTTCTGCCCCCTCCTAAGAG  50
      |||| |||| ||||||||||| ||| |  || |||||||||||||||| |
seq2  GGGT-ACTAGGTCTAGCCAGC-CCTTT--CCATCTGCCCCCTCCTAAGGG  46

seq1  ACAACGTTGGGGATTCTTTCCTGATCCCCAAACCCCAAAATTTCAAAGAG  100
      || ||||| ||||||| ||||||||||||||||||||||||| |||||||
seq2  AC-ACGTT-GGGATTC-TTCCTGATCCCCAAACCCCAAAATTCCAAAGAG  93

seq1  TAAGCCGTTTAACTTAGATTTGTTCCTTAAAAGGAAAAAGTGTTTCATTT  150
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  T-AGCCGTTTAAC-TAGATTTGTTCCTTAAAAGGAAAAAGTGTTTCATTT  141

seq1  AGAACACTTCATGTTCTCAGGAAGTACAGAAAATGAAATGCGTCTTCGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACACTTCATGTTCTCAGGAAGTACAGAAAATGAAATGCGTCTTCGTA  191

seq1  ATACAAGTCCTAAAACTTAATCTCATGCTTGGGCTGATTTCATTGCTTTC  250
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATACAAGTCCTAAAACTTAATCTCATGCTTGGGCTGATTTCAATGCTTTC  241

seq1  TTTGGCTCCTAAGTTATTGTTTCCATTTACACATTTAAAACGGAATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTCCTAAGTTATTGTTTCCATTTACACATTTAAAACGGAATTATT  291

seq1  ATTATTGAAATTGAGAAGTGGTGATTATATGAATTTATGCTACATACGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGAAATTGAGAAGTGGTGATTATATGAATTTATGCTACATACGAT  341

seq1  GTTTTGAAATTTATACAAATTGTATACTATGACTAAATCAAAGTAATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGAAATTTATACAAATTGTATACTATGACTAAATCAAAGTAATTAG  391

seq1  CAAAGGTGTATGTATCTGATACACTTAAATTTAGTGGTAAGAACATTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGTGTATGTATCTGATACACTTAAATTTAGTGGTAAGAACATTTAC  441

seq1  AACTCACTTTTGGACATTTCAAATACAAAATCTCTTATAGCCACTTGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACTTTTGGACATTTCAAATACAAAATCTCTTATAGCCACTTGATA  491

seq1  GCCACTATGTTGTACAGTAGATCTCTCGAACTTACTTTTTTTTTTTTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTATGTTGTACAGTAGATCTCTCGAACTTACTTTTTTTTTTTTTGC  541

seq1  AGCTAACTAAAATTTTATATTCTTCCCTGACGCAGCCCCTACCAACATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAACTAAAATTTTATATTCTTCCCTGACGCAGCCCCTACCAACATGC  591

seq1  TGATTACTCCCCATGACTTGATTTTTAAAAGTTCCACATGTGAGTGAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTACTCCCCATGACTTGATTTTTAAAAGTTCCACATGTGAGTGAGAC  641

seq1  AGTTTTCTAACATGAATCTAACATGAGATTCATGAAATCTAGTGTAGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCTAACATGAATCTAACATGAGATTCATGAAATCTAGTGTAGTTT  691

seq1  TGGACAAACCATCAGAAGTCTTATGGAAAAGGTTACAGCGGCCCAGGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAAACCATCAGAAGTCTTATGGAAAAGGTTACAGCGGCCCAGGTCT  741

seq1  GCCACTGTGTAGTCATGTGACCTTGGGTAAGTCACTTAGCATTTTTGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTGTAGTCATGTGACCTTGGGTAAGTCACTTAGCATTTTTGAGC  791

seq1  ATCATCTTCCTCCTCTGTCCCACAGAAAAAAACGATCCCAGCAATGCACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTTCCTCCTCTGTCCCACAGAAAAAAACGATCCCAGCAATGCACA  841

seq1  GAGTTTTTGTGAGGCTTCAGTGACCGAAGCATGCAATGTAATTTCTGGAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTTGTGAGGCTTCAGTGACCGAAGCATGCAATGTAATTTCTGGAT  891

seq1  ATGGGATGTGACCAACTAATCATAGACGTTACCACAAGCAGAATATATGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGATGTGACCAACTAATCATAGACGTTACCACAAGCAGAATATATGG  941

seq1  GTCTATTTCCTTATATCTTCCCACTGGGCTGGCTAGAGAGAATGATGATT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTTCCTTATATCTTCCCACTGGGCTGGCTAGAGAGAATGATGATT  991

seq1  TGAACATACTGTGGATTCCATTAACGCAGCACTTTAAAGTACTAGGTTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATACTGTGGATTCCATTAACGCAGCACTTTAAAGTACTAGGTTCT  1041

seq1  TGGCATGTGAATGTTAGGCACTGGAACATAAGCACCTGAATTC  1093
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGTGAATGTTAGGCACTGGAACATAAGCACCTGAATTC  1084