BAC Information

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BAC

Clone NameB6Ng01-018G01
Chromosome13 (Build37)
Map Location 44,375,088 - 44,536,952
singlet/doubletdoublet
Overlap geneEG637868, EG667157
Upstream geneGfod1, Sirt5, Nol7, Ranbp9, LOC637627, Ccdc90a, Rnf182, LOC100039403, Cd83, LOC100039432, A730030A06
Downstream geneJarid2, Dtnbp1, Hsp25-ps1, LOC100039502, LOC667204, LOC100039533, Mylip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-018G01.bB6Ng01-018G01.g
ACCDH851798DH851799
length600508
definitionDH851798|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G01, 5' end.DH851799|Mus musculus domesticus DNA, BAC clone: B6Ng01-018G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,375,088 - 44,375,690)(44,536,439 - 44,536,952)
sequence
ttgttttatatctaagaaaatcaaggaaataacatttctttcttgggtat
ggtttcctttattttatccagcatttgtctgatggatgctagtgtcttgt
gggagcctagagttaggagacgtgtcaagtgggaagacccaggttgcatc
ccacgtactcctcagctacacaacctcagccaggtactccacatccctga
actctgtgacatgaaagtcattttgttgatgaagagagtcactactagga
aggcagtgacaggcagcagatgcttggtaaacattgcccatcctcatcta
gcatttatttattgagcacccatcccatgcaaatatcagtactgctggta
cggacaatggccattgttcttaaagaaggaaaacggatgagtaaacagac
actgacataagctctgtagccaagggagatttggggtacagtgagagtac
agaggtagttccagtcatgtctacacaagaattttcacatccactgtcca
ctgtcattggtaccagaatccctccgccagtttccgacttaaatgtcaca
taatgttcatgtgtttaaagtgactcaatattaaacaaattttccacaga

aaagagctcagcatgtcacatttgggccttcctcttttgtttgtttgttt
gtttcaacaacaaagctaatacatcttagtagaggcatatgtgattctgg
gacaatctcatgggacaggtctctggagaagtgggacttgtgtcttgtag
agaagtgagacacgatcatgtgtgattgttatgtgttatgagacaggaaa
ggaaaagttgtgaaggggaatcagggatcaggggaagtggtgctcacaga
aggaagggagcaggtcagaaagcaagcaagcaggggcatttgatcctgcc
atgaatgatgagtaggaattgcctattccaagaaatagtaaccatgtgac
tcaccgcttgactaaaattcaaagctaactgggcaccttatatttgatac
atctggccacaagcctagtggtagatggaagtgcgacagtctctgggtga
cccatgactcctggcccatagatgaggcaaagatacaggggagttgctgg
ggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_44375088_44375690
seq2: B6Ng01-018G01.b_34_639

seq1  GAATTCT--GTTTATATCTAAGAAAATCAAGGAAATAACATTTCTTTCTT  48
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGTTTTATATCTAAGAAAATCAAGGAAATAACATTTCTTTCTT  50

seq1  GGGTATGGTTTCCTTTATTTTATCCAGCATTTGTCTGATGGATGCTAGTG  98
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATGGTTTCCTTTATTTTATCCAGCATTTGTCTGATGGATGCTAGTG  100

seq1  TCTTGTGGGAGCCTAGAGTTAGGAGACGTGTCAAGTGGGAAGACCCAGGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGGGAGCCTAGAGTTAGGAGACGTGTCAAGTGGGAAGACCCAGGT  150

seq1  TGCATCCCACGTACTCCTCAGCTACACAACCTCAGCCAGGTACTCCACAT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCACGTACTCCTCAGCTACACAACCTCAGCCAGGTACTCCACAT  200

seq1  CCCTGAACTCTGTGACATGAAAGTCATTTTGTTGATGAAGAGAGTCACTA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAACTCTGTGACATGAAAGTCATTTTGTTGATGAAGAGAGTCACTA  250

seq1  CTAGGAAGGCAGTGACAGGCAGCAGATGCTTGGTAAACATTGCCCATCCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAAGGCAGTGACAGGCAGCAGATGCTTGGTAAACATTGCCCATCCT  300

seq1  CATCTAGCATTTATTTATTGAGCACCCATCCCATGCAAATATCAGTACTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAGCATTTATTTATTGAGCACCCATCCCATGCAAATATCAGTACTG  350

seq1  CTGGTACGGACAATGGCCATTGTTCTTAAAGAAGGAAAACGGATGAGTAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTACGGACAATGGCCATTGTTCTTAAAGAAGGAAAACGGATGAGTAA  400

seq1  ACAGACACTGACATAAGCTCTGTAGCCAAGGGAGATTTGGGGTACAGTGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACACTGACATAAGCTCTGTAGCCAAGGGAGATTTGGGGTACAGTGA  450

seq1  GAGTACAGAGGTAGTTCCAGTCATGTCTACACAAGAATTTTCACATCCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAGAGGTAGTTCCAGTCATGTCTACACAAGAATTTTCACATCCAC  500

seq1  TGTCCACTGTCATTGGTACCAGAATCCCTCCACCAGTTTCCGACTTAAAT  548
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCCACTGTCATTGGTACCAGAATCCCTCCGCCAGTTTCCGACTTAAAT  550

seq1  GTCACATAATGTTCATGTGTTTAAAGTGACTCAATAGGAAACAAA-TATC  597
      ||||||||||||||||||||||||||||||||||||  ||||||| | ||
seq2  GTCACATAATGTTCATGTGTTTAAAGTGACTCAATATTAAACAAATTTTC  600

seq1  CACAGA  603
      ||||||
seq2  CACAGA  606

seq1: chr13_44536439_44536952
seq2: B6Ng01-018G01.g_62_575 (reverse)

seq1  CCCCCTCCCCAGCAACTCCCCTGTATCTTTGCCTCATCTATGGGCCAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCCAGCAACTCCCCTGTATCTTTGCCTCATCTATGGGCCAGGA  50

seq1  GTCATGGGTCACCCAGAGACTGTCGCACTTCCATCTACCACTAGGCTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGGTCACCCAGAGACTGTCGCACTTCCATCTACCACTAGGCTTGT  100

seq1  GGCCAGATGTATCAAATATAAGGTGCCCAGTTAGCTTTGAATTTTAGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGATGTATCAAATATAAGGTGCCCAGTTAGCTTTGAATTTTAGTCA  150

seq1  AGCGGTGAGTCACATGGTTACTATTTCTTGGAATAGGCAATTCCTACTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTGAGTCACATGGTTACTATTTCTTGGAATAGGCAATTCCTACTCA  200

seq1  TCATTCATGGCAGGATCAAATGCCCCTGCTTGCTTGCTTTCTGACCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCATGGCAGGATCAAATGCCCCTGCTTGCTTGCTTTCTGACCTGCT  250

seq1  CCCTTCCTTCTGTGAGCACCACTTCCCCTGATCCCTGATTCCCCTTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCCTTCTGTGAGCACCACTTCCCCTGATCCCTGATTCCCCTTCACA  300

seq1  ACTTTTCCTTTCCTGTCTCATAACACATAACAATCACACATGATCGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTCCTTTCCTGTCTCATAACACATAACAATCACACATGATCGTGTC  350

seq1  TCACTTCTCTACAAGACACAAGTCCCACTTCTCCAGAGACCTGTCCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCTCTACAAGACACAAGTCCCACTTCTCCAGAGACCTGTCCCATG  400

seq1  AGATTGTCCCAGAATCACATATGCCTCTACTAAGATGTATTAGCTTTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTCCCAGAATCACATATGCCTCTACTAAGATGTATTAGCTTTGTT  450

seq1  GTTGAAACAAACAAACAAACAAAAGAGGAAGGCCCAAATGTGACATGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAAACAAACAAACAAACAAAAGAGGAAGGCCCAAATGTGACATGCTG  500

seq1  AGCTCTTTGAATTC  514
      ||||||||||||||
seq2  AGCTCTTTGAATTC  514