BAC Information

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BAC

Clone NameB6Ng01-024F22
Chromosome13 (Build37)
Map Location 63,002,539 - 63,003,551
singlet/doubletsinglet
Overlap genenone
Upstream geneEG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978, EG435366, LOC380850, LOC630951, Fbp2, Fbp1
Downstream geneLOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1, C030010C08Rik, 0610007P08Rik, 9330134C04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024F22.bB6Ng01-024F22.g
ACCDH856025DH856026
length9651,006
definitionDH856025|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F22, 5' end.DH856026|Mus musculus domesticus DNA, BAC clone: B6Ng01-024F22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatattcagtggctgagaagcacctaaagaaata
gtcaacatccttagtcatcatggaaatgcaaatcaaaacaactctgagat
tctacctcacaccagtcagaatgggtaagatcaaaatttcaagcgacagc
agatattggtgaggatttggcaaaagaagaatattcctccattgttggtg
ggattgcaagctggtacaaccactctggaaatcagtcttgagtttcttta
gaaaactggacatagtactacctgagaacccagctataccacttctgtgc
atatacccaaaagatgctccaacatataacaaggacacatgttccattat
gttcatagcagccttatttataatagccagaagctgcaaagaactcagat
gtccttcaacataggattggatacagaaaatgtggaataatttacacaat
ggagtactactaaggtattaaaaacaatgacttcatgaaattcttagaaa
acttgatggaaatagacaatatcatcctgaatgaggtaacccagtcaaaa
aagacacacatggaatgcacttactgataagtagatattagctcaaaagc
taggcataccaaagatacaattaacagaccatatgaagggcaagaagaag
gaagaccaaaatatgaatgcttcagtccttcttagcagggggaagacaat
actcatgggagggaaagtgtggagggacttggcaagaagtgaggagtgga
agggaggaaaaaggggacaggaccaagtatgggaggagagagggatgatt
tacagagggtcaggaatttgagcacaggtgtgtagcaatggtgaaggggg
atctggggaccagcaagtccaatatgctagaaagcaaaaggctcccagga
cgtagagggtgagagtagttgaaatgttcaacacagagggagaacattag
aactttttcctgtgg
gaattccatgacacaagaacctttagggctgatgggtcacagccctagca
ccaggaatccactcacctccagtgcctgcagaggcagcagacatgccaaa
gggtggctctctctgggtgtagatcacaattaaagctacaaaatgaagtc
tccctagctatgtcactgctaatttaatctaattagcctttgaatggggt
tctcagcctgcttcagaggcagaatgtaagttgaaattgctaattgcaaa
ctggggggttttctgcatggacaattgttcttgttctttggttacttgtt
caactagatgcagtactccttgcaacacataaataaagcctctttacaag
acaaacaagaatggaatggcaggtccctcgaagttggttttggaaattca
ttgatggccttgggcttctgagaattttaaagtgtgtttcataagcaaat
aaaaatgctctctgctcattcaaattgcctgcctgtttaccactcttcta
ttagatacacccattttaaattatcttcgggatcttgattacgagcctca
aagccactgtattgaacgagctttgttgtggttaaatagttctgatcttg
ggagatgagcctggtgtgtttgagcagagatcttgagtgtgcggtgtgca
ttccaatttgcttatcatcaggtatctggatgtggacttctctgaaccat
ggacaaagatttggtgagaaaagtgtgagctttgcatgaagactcttctg
gctgctatggctttggcttcatttgttctcttgggtcataactgctaccc
acagagtcactgtgaagcctggaaaattgtgtaaaacatttcacaaacca
tggaccagttgctaatacttctacttccctatctgtgatgcaaaggaact
caattgggggatatgaacatccctgtatttggttcccattactacatagc
aagccctaagacagcttcccttaaacacatatatatcatcgaggtttgca
gaccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_63002539_63003551
seq2: B6Ng01-024F22.g_68_1073 (reverse)

seq1  TTGGTCTGCAAAACCCTGGATGAATATATATGTTGTTTTAAGGGAGGCTG  50
      ||||||||||||  ||| |||| ||||||||||   ||||||||| ||||
seq2  TTGGTCTGCAAA--CCTCGATG-ATATATATGT--GTTTAAGGGAAGCTG  45

seq1  TCTGTAGGGCTTGCTATTGTAGTTATGGGAAACAAATACAGGGACTGTTC  100
      ||| |||||||||||| |||||| ||||||| |||||||||||| |||||
seq2  TCT-TAGGGCTTGCTA-TGTAGTAATGGGAACCAAATACAGGGA-TGTTC  92

seq1  ATATCCCCCAATTGAGTTCCTTTGCATCACAGATAGGGAAGTAGAAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCCCAATTGAGTTCCTTTGCATCACAGATAGGGAAGTAGAAGTAT  142

seq1  TAGCAACTGGTCCATGGTTTGTGAAATG-TTTACAC-ATTTTCCAGGCTT  198
      |||||||||||||||||||||||||||| ||||||| |||||||||||||
seq2  TAGCAACTGGTCCATGGTTTGTGAAATGTTTTACACAATTTTCCAGGCTT  192

seq1  CACAGTGACTCTGTGGGTAGCAGTTATGACCCAAGAAGAACAAATGAAGC  248
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CACAGTGACTCTGTGGGTAGCAGTTATGACCCAAG-AGAACAAATGAAGC  241

seq1  CAAAGCCATAGCAGCCAGAAGAGTCTTCATGCAAAGCTCACACTTTTCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCATAGCAGCCAGAAGAGTCTTCATGCAAAGCTCACACTTTTCTC  291

seq1  ACCAAATCTTTGTCCATGGTTCAGAGAAGTCCACATCCAGATACCTGATG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATCTTTGTCCATGGTTCAGAGAAGTCCACATCCAGATACCTGATG  341

seq1  ATAAGCAAATTGGAATGCACACCGCACACTCAAGATCTCTGCTCAAACAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCAAATTGGAATGCACACCGCACACTCAAGATCTCTGCTCAAACAC  391

seq1  ACCAGGCTCATCTCCCAAGATCAGAACTATTTAACCACAACAAAGCTCGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTCATCTCCCAAGATCAGAACTATTTAACCACAACAAAGCTCGT  441

seq1  TCAATACAGTGGCTTTGAGGCTCGTAATCAAGATCCCGAAGATAATTTAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACAGTGGCTTTGAGGCTCGTAATCAAGATCCCGAAGATAATTTAA  491

seq1  AATGGGTGTATCTAATAGAAGAGTGGTAAACAGGCAGGCAATTTGAATGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGTGTATCTAATAGAAGAGTGGTAAACAGGCAGGCAATTTGAATGA  541

seq1  GCAGAGAGCATTTTTATTTGCTTATGAAACACACTTTAAAATTCTCAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAGCATTTTTATTTGCTTATGAAACACACTTTAAAATTCTCAGAA  591

seq1  GCCCAAGGCCATCAATGAATTTCCAAAACCAACTTCGAGGGACCTGCCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAGGCCATCAATGAATTTCCAAAACCAACTTCGAGGGACCTGCCAT  641

seq1  TCCATTCTTGTTTGTCTTGTAAAGAGGCTTTATTTATGTGTTGCAAGGAG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCTTGTTTGTCTTGTAAAGAGGCTTTATTTATGTGTTGCAAGGAG  691

seq1  TACTGCATCTAGTTGAACAAGTAACCAAAGAACAAGAACAATTGTCCATG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCATCTAGTTGAACAAGTAACCAAAGAACAAGAACAATTGTCCATG  741

seq1  CAGAAAACCCCCCAGTTTGCAATTAGCAATTTCAACTTACATTCTGCCTC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACCCCCCAGTTTGCAATTAGCAATTTCAACTTACATTCTGCCTC  791

seq1  TGAAGCAGGCTGAGAACCCCATTCAAAGGCTAATTAGATTAAATTAGCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCAGGCTGAGAACCCCATTCAAAGGCTAATTAGATTAAATTAGCAG  841

seq1  TGACATAGCTAGGGAGACTTCATTTTGTAGCTTTAATTGTGATCTACACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATAGCTAGGGAGACTTCATTTTGTAGCTTTAATTGTGATCTACACC  891

seq1  CAGAGAGAGCCACCCTTTGGCATGTCTGCTGCCTCTGCAGGCACTGGAGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGAGCCACCCTTTGGCATGTCTGCTGCCTCTGCAGGCACTGGAGG  941

seq1  TGAGTGGATTCCTGGTGCTAGGGCTGTGACCCATCAGCCCTAAAGGTTCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGGATTCCTGGTGCTAGGGCTGTGACCCATCAGCCCTAAAGGTTCT  991

seq1  TGTGTCATGGAATTC  1013
      |||||||||||||||
seq2  TGTGTCATGGAATTC  1006