BAC Information

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BAC

Clone NameB6Ng01-024J17
Chromosome13 (Build37)
Map Location 47,692,739 - 47,693,587
singlet/doubletsinglet
Overlap genenone
Upstream geneCap2, C78339, Nup153, Kif13a, LOC544928, Nhlrc1, Tpmt, Aof1, Dek, LOC100039761, Ibrdc2
Downstream gene4931429P17Rik, Id4, LOC667351, Zfp169, A830005F24Rik, AW456874
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024J17.bB6Ng01-024J17.g
ACCDH856189DH856190
length848982
definitionDH856189|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J17, 5' end.DH856190|Mus musculus domesticus DNA, BAC clone: B6Ng01-024J17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttccccttcaggacatcacttttgtctcagcagcccacagca
ctgcagacagcagctcagaactacacctaggtgggtctcagagacctgtt
ttcttgtacgtagaggaggcagccatgtgtacagctgcatctgctatggg
ttccagaaccagcgcctacaaagctgctctaccagtgacagcggaaatga
aaggcgcccagctgaactccgattctcttcacttcaaaaccagagtcctt
tccatagggtccagtgccccagcatactaaggacctaaaaactctctgct
ctaaagccaagtggaactctgaaggaatccttaccctctctgcttgctct
ctgcagggacttggggagatacaaagtggcgcttatgttccaccttggtc
cccacatctgttttatctttgacttttccaccttctccgatgcctccatt
ttcatttaagaccccttttcataaatcatcagaagccctctcacaaaaag
ctattttgcaaaatcccaaatttttaagacagaagcagtggcgtttcgct
tttttaagaacaaggctcagggccaggaagtgatggcacacacatttaat
cccaacacttgggaggcagaggtaggcagatttcgaggccagcctggtct
acagagtgagttccaggacagccagggctatacagagaagctctgtctca
taacaccaaaaaccataaaaccaaaaaaaaaaaaggctcggtagtttagg
aatctgaacatctctcagctatgtggttccttgcaatctgacaagctggt
gcagcttgtgtttgtccatgtgtgggtctgtgtgtgtgtgtgtctgtc
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
tcgaatgctttctccgagtctaaggagatgatcacgtgttttttgtcttt
gagtttgtttatataatggattacgttgatggatttccatatattaaacc
atccctgcatccctggaataaaacctacatggttaggatggatgattgtt
ttaatgtgttcttggattcggttagcgagaattttattgagtatttttgc
attgatattcataagggaaattggtctggagttgtctatctttgttggat
ctctctgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttctacttctattttgtggagtagtttgtgcagaactgg
aattagatcttctttgaaggtctaatagactctgcactaaacccatctgg
tcctgggctttttttggttgggagactattaatgactgcttctatttctt
taggagatatgggactgtttagattgttaacttgatcctgatttaacctt
ggtacctggtatctgtctagaaattcttccatttcatccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatgtgttgttatgtctcccttttcatttctgattttgttaatt
aggatgctgtccctgcctttatatcttagtgtctgtataacatctgtcca
ggctcttctggctttcatagtctctggtgaaaaatattggtgtattctga
taggcttgcctttatatgtacttgaactttttcccttactgcttttagta
ttctatcttatttagggatttgatgttctgattattatgtgtccggaaga
attcttttctgtccagctatttggagttcgtaagcttctgtatgtcaggg
catccctttctttaatttggaagttttcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_47692739_47693587
seq2: B6Ng01-024J17.b_42_889 (reverse)

seq1  GACAGACACACACACACACAGACACACACATGGACAGACACACAGCTGCA  50
      ||||||||||||||||||||||| |||||||||||| ||||| |||||||
seq2  GACAGACACACACACACACAGACCCACACATGGACAAACACA-AGCTGCA  49

seq1  CCAGCTTGTCAGATTGCAAGGAACCACATAGCTGAGAGTATGTTCAGATT  100
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCAGCTTGTCAGATTGCAAGGAACCACATAGCTGAGAG-ATGTTCAGATT  98

seq1  CCTAAACTACCGAGCCTTTTTTTTTTTTGGTTTT-TGGTTTTTGGTGTTT  149
      |||||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  CCTAAACTACCGAGCCTTTTTTTTTTTTGGTTTTATGGTTTTTGGTGTTA  148

seq1  TGAGACAGAGCTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGAGCTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTCTGT  198

seq1  AGACCAGGCTGGCCTCGAAATCTGCCTACCTCTGCCTCCCAAGTGTTGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCCTCGAAATCTGCCTACCTCTGCCTCCCAAGTGTTGGG  248

seq1  ATTAAATGTGTGTGCCATCACTTCCTGGCCCTGAGCCTTGTTCTTAAAAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATGTGTGTGCCATCACTTCCTGGCCCTGAGCCTTGTTCTTAAAAA  298

seq1  AGCGAAACGCCACTGCTTCTGTCTTAAAAATTTGGGATTTTGCAAAATAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAAACGCCACTGCTTCTGTCTTAAAAATTTGGGATTTTGCAAAATAG  348

seq1  CTTTTTGTGAGAGGGCTTCTGATGATTTATGAAAAGGGGTCTTAAATGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTGAGAGGGCTTCTGATGATTTATGAAAAGGGGTCTTAAATGAA  398

seq1  AATGGAGGCATCGGAGAAGGTGGAAAAGTCAAAGATAAAACAGATGTGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGGCATCGGAGAAGGTGGAAAAGTCAAAGATAAAACAGATGTGGG  448

seq1  GACCAAGGTGGAACATAAGCGCCACTTTGTATCTCCCCAAGTCCCTGCAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGTGGAACATAAGCGCCACTTTGTATCTCCCCAAGTCCCTGCAG  498

seq1  AGAGCAAGCAGAGAGGGTAAGGATTCCTTCAGAGTTCCACTTGGCTTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGCAGAGAGGGTAAGGATTCCTTCAGAGTTCCACTTGGCTTTAG  548

seq1  AGCAGAGAGTTTTTAGGTCCTTAGTATGCTGGGGCACTGGACCCTATGGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAGTTTTTAGGTCCTTAGTATGCTGGGGCACTGGACCCTATGGA  598

seq1  AAGGACTCTGGTTTTGAAGTGAAGAGAATCGGAGTTCAGCTGGGCGCCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTCTGGTTTTGAAGTGAAGAGAATCGGAGTTCAGCTGGGCGCCTT  648

seq1  TCATTTCCGCTGTCACTGGTAGAGCAGCTTTGTAGGCGCTGGTTCTGGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCCGCTGTCACTGGTAGAGCAGCTTTGTAGGCGCTGGTTCTGGAA  698

seq1  CCCATAGCAGATGCAGCTGTACACATGGCTGCCTCCTCTACGTACAAGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGCAGATGCAGCTGTACACATGGCTGCCTCCTCTACGTACAAGAA  748

seq1  AACAGGTCTCTGAGACCCACCTAGGTGTAGTTCTGAGCTGCTGTCTGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGTCTCTGAGACCCACCTAGGTGTAGTTCTGAGCTGCTGTCTGCAG  798

seq1  TGCTGTGGGCTGCTGAGACAAAAGTGATGTCCTGAAGGGGAAATGAATTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTGGGCTGCTGAGACAAAAGTGATGTCCTGAAGGGGAAATGAATTC  848