BAC Information

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BAC

Clone NameB6Ng01-025F07
Chromosome13 (Build37)
Map Location 72,866,008 - 72,866,894
singlet/doubletsinglet
Overlap genenone
Upstream geneIrx1, LOC100042828, LOC100042832, LOC100042836, Irx2
Downstream geneLOC621486, Irx4, LOC100042864, Ndufs6, Mrpl36, Aytl2, Slc6a3, Clptm1l, Tert, Slc6a18, Slc6a19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025F07.bB6Ng01-025F07.g
ACCDH856715DH856716
length8881,154
definitionDH856715|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F07, 5' end.DH856716|Mus musculus domesticus DNA, BAC clone: B6Ng01-025F07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccagggcctctgcctctctcgtaggctcctatcctggctctt
agaaaatccctttctaaagaaaaccccaacaagaggatttttgctatgga
tggagtgtgtctctagtggccttcacatgctgtaaccattgatgtcacat
ggtctatatacaggtacaacctgtggtcctcatgtcaaggtccttctgac
ctctgccatttcagaggaccaagttggatggcagagatcagaccagggac
catgtcacaacagagtctagattgtcagaccaacgctcacactgcagtct
gacccttgttctgctccattccacattcagaacccaaggccatggacata
ctcatggaatgatcacaggattcttcccaggctccaagacagaagcctgc
tgttagactcctagaccctgctcttcaacacacacacacacacacacaca
cacacacacacacacacacacacagaggcagaagctcagaacacctggcc
cccacaggccacagcaagccagcaacaatgctgtggaggtccttaacacc
ccttgcttcagttgatttgccttctctgccaaagtccttcctgctcaaat
agtagctgagccgtctactattcctggagtctggcatcccctggcccctg
aatggttaacgatggctgtctattcataggcaccaactgagctagtcaca
tgtcctctgagagagaagcagtgcaaagggtctgagtacaactttcagtc
taatggctgggccatcttagactgacgttcacctggagcctcctcttcac
tgtatgaggtagatcgcaagggctgcatagggatggtgcaggggtggggc
aggactgtgatagggagtggatgggtcaggggtggaac
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcaggggaatgcaaatcaaaacaaccctgggat
tccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttagtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaagatccagcaatacctcttctgggc
atatattcagaagatgccccaacctgtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggttacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaatttgctaaacgcatgaaactcaa
gaagaacgaagaccaaagtgtggacactatgccccgccttagaattggga
acaaaacacccatggaaggagttacagagacaaagtttggagctgtgatg
aaaggatggaccatctagtgattgccatatccagggatccatcccataat
cagcttccaaatgctgacaccattgcatatactagcaaagttttgctgaa
aggacccaaatatagctgcctcttgtgagactatgcctgggcctagcaaa
cacagaagtggatgctcacagtcagctatgatggatcacagggccccagt
ggagagctagagaaagcacccaaggaactaaagggactgcaacctatagt
gacaacaatatgactaacagtatcccggagctctgactctagctgcatat
gtatcaaagatgctagtcgccgtcactgaagagagccattgacttgcaac
ttaatgcccagagtactaggtacgccagggcaaaaggggatagtgtggtg
cata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_72866008_72866894
seq2: B6Ng01-025F07.b_45_932 (reverse)

seq1  GCTCCACCCCTGACCCATCCACTCCCTATCACAGTCCTGCCCCACCCCTG  50
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCACCCCTGACCCATCCACTCCCTATCACAGTCCTGCCCCACCCCTG  50

seq1  CACCATCCCTATGCAGCCCTTGCGATCTACCTCATACAGTGAAGAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATCCCTATGCAGCCCTTGCGATCTACCTCATACAGTGAAGAGGAGG  100

seq1  CTCCAGGTGAACGTCAGTCTAAGATGGCCCAGCCATTAGACTG-AAGTTG  149
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CTCCAGGTGAACGTCAGTCTAAGATGGCCCAGCCATTAGACTGAAAGTTG  150

seq1  TACTCAGACCCTTTGCACTGCTTCTCTCTCAGAGGACATGTGACTAGCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCAGACCCTTTGCACTGCTTCTCTCTCAGAGGACATGTGACTAGCTC  200

seq1  AGTTGGTGCCTATGAATAGACAGCCATCGTTAACCATTCAGGGGCCAGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGTGCCTATGAATAGACAGCCATCGTTAACCATTCAGGGGCCAGGG  250

seq1  GATGCCAGACTCCAGGAATAGTAGACGGCTCAGCTACTATTTGAGCAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAGACTCCAGGAATAGTAGACGGCTCAGCTACTATTTGAGCAGGA  300

seq1  AGGACTTTGGCAGAGAAGGCAAATCAACTGAAGCAAGGGGTGTTAAGGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTTTGGCAGAGAAGGCAAATCAACTGAAGCAAGGGGTGTTAAGGAC  350

seq1  CTCCACAGCATTGTTGCTGGCTTGCTGTGGCCTGTGGGGGCCAGGTGTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGCATTGTTGCTGGCTTGCTGTGGCCTGTGGGGGCCAGGTGTTC  400

seq1  TGAGCTTCTGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTCTGCCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  450

seq1  TGTGTGTGTGTTGAAGAGCAGGGTCTAGGAGTCTAACAGCAGGCTTCTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTTGAAGAGCAGGGTCTAGGAGTCTAACAGCAGGCTTCTGT  500

seq1  CTTGGAGCCTGGGAAGAATCCTGTGATCATTCCATGAGTATGTCCATGGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAGCCTGGGAAGAATCCTGTGATCATTCCATGAGTATGTCCATGGC  550

seq1  CTTGGGTTCTGAATGTGGAATGGAGCAGAACAAGGGTCAGACTGCAGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGTTCTGAATGTGGAATGGAGCAGAACAAGGGTCAGACTGCAGTGT  600

seq1  GAGCGTTGGTCTGACAATCTAGACTCTGTTGTGACATGGTCCCTGGTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGTTGGTCTGACAATCTAGACTCTGTTGTGACATGGTCCCTGGTCTG  650

seq1  ATCTCTGCCATCCAACTTGGTCCTCTGAAATGGCAGAGGTCAGAAGGACC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCCATCCAACTTGGTCCTCTGAAATGGCAGAGGTCAGAAGGACC  700

seq1  TTGACATGAGGACCACAGGTTGTACCTGTATATAGACCATGTGACATCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACATGAGGACCACAGGTTGTACCTGTATATAGACCATGTGACATCAA  750

seq1  TGGTTACAGCATGTGAAGGCCACTAGAGACACACTCCATCCATAGCAAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTACAGCATGTGAAGGCCACTAGAGACACACTCCATCCATAGCAAAA  800

seq1  ATCCTCTTGTTGGGGTTTTCTTTAGAAAGGGATTTTCTAAGAGCCAGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTGTTGGGGTTTTCTTTAGAAAGGGATTTTCTAAGAGCCAGGAT  850

seq1  AGGAGCCTACGAGAGAGGCAGAGGCCCTGGATGAATTC  887
      ||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCTACGAGAGAGGCAGAGGCCCTGGATGAATTC  888