BAC Information

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BAC

Clone NameB6Ng01-025I14
Chromosome13 (Build37)
Map Location 13,077,008 - 13,078,151
singlet/doubletsinglet
Overlap genenone
Upstream geneRyr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900, Edaradd, Ero1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754
Downstream genePrl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst, LOC100039831, Gng4, EG665000, EG665008, LOC630894, LOC100040205, B3galnt2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025I14.bB6Ng01-025I14.g
ACCDH856856DH856857
length1,133820
definitionDH856856|Mus musculus domesticus DNA, BAC clone: B6Ng01-025I14, 5' end.DH856857|Mus musculus domesticus DNA, BAC clone: B6Ng01-025I14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacacaaaagaaaataaaaggatcaggttctaacaaagcatgca
aataccttaatacttgttccacttctttcatagagcaagcaaatttgggt
gcagcaagggagataggagacactttctttcatacctcttcttaataaaa
taaagtagttagtattccttatcaacgtgaagtaatacaaaatgggacca
gtcttcctagtcttgccacagaaattggcagcacattacccagtgcactg
aatgttcaggcatgaaatttacaggatatattaaacttgcctcaaagttg
agaatgagcaatgtattgcagagtcagaatctctgaaaggagactttcaa
agacaaagtgtgaacttgtagaggtaaagccaaaatggcaatgcctctgc
tagttggtgggaaatactctattttgaggggaaatttttctagagttctc
tttttttattgtatcctggtctatttttattatcagagtaatatcaattc
agataaatgagtctgttagtattccctttctagaaaattttaaatattta
aattaaatgttgaggaagtcaaataatttgtaatttttaattattaggga
atagaaacttacaatgcataaaatatttatcttatcaacttatcctgtaa
aaattaacgggtttcttgacttcctattttaacctaatctaaccatacat
ttataaccccatttcttagttgacaaaatcaggatattttgagggaaaaa
aatcttctttcctaacacatgctgtctttatctcactgtcctgcatttga
tctggttcttcacttaccacacatgtgtctaatcttagaataaaggtaac
cacacagaaacacgggatacttttcaaccacttagtgcattcgggtttac
cacttccactatatataataattttctgcaattttgcatctgcaacaatt
tactgttttatagacgcttttgcctgcctgtgtctgtgagatagtaggta
gtaataaataataatgaaaggtctcaaagatgattaacttcaatagccct
ggacaataccctaagttatttggggcaatgtaattggaagaattcatact
ccatcagctcaaaatacatttgttcgccaggag
gaattcttgaaattctttagcaaatggatggaactagaaaatatcctgag
ggaggtatctcagtcccaaaagaacacacatggtatgcactcactaataa
gtagctattagcccaaaagctccaaatatcgaagatacaattcccagacc
acatgcaactcaagaaggaagaccaaagtgtctgtgtttcaatccttctt
agaaggggaataaaatactcacaggagcaaatatggagataaggccatcc
agagactgtcccatttggtgattcatcccatttagagttatgaaacccag
acggtattgtgcattccaaaaagtgcatgctgaaaggagcctgatattgc
tgtcagccgagagacccaaccagagcttacaaatgcagaggtggatgctc
gcagccaaccattgcttacacatacaggggcagatgctcacagccactga
ttggtgtgagcatggggttcccagtagtggagttagagaaaggactgaat
gagttcaaggggtttgtcaccctataggaagaaggacaatatcaaccaac
cagacccccagagcttccagggagtaaactatcaaacaaggagtacacat
ggctccagctgcatatgtagcagaggatggacttgtcaggcatcaatggg
aggagaggtccttccttagtcctatgaagactcaatagatgtcccactgt
agggaaatagagggcgggaggtgaaaatggttgggtgggtagagaaacac
cctcattgaagaagggggtggaggatggacaatattttgtagtatatgga
accggaagtgcataacattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_13077008_13078151
seq2: B6Ng01-025I14.b_37_1169 (reverse)

seq1  CTCCTGACGAACAAAATTGTATTTTGAGCTGAGTGGAGTAATGAATATCT  50
      |||||| ||||||||  ||||||||||||||| |||||| |||||| |||
seq2  CTCCTGGCGAACAAA--TGTATTTTGAGCTGA-TGGAGT-ATGAAT-TCT  45

seq1  TCCAATGTACATCTGCCCCCAAATACTTAGGGGTATTGTCCAGGGCTATT  100
      |||||| ||||| |||||| ||  ||||| ||||||||||||||||||||
seq2  TCCAAT-TACAT-TGCCCCAAATAACTTA-GGGTATTGTCCAGGGCTATT  92

seq1  GATGTTTAAATCAATCTTTGAGAACCTTTCATTATATTTTATTACTACCT  150
      || |||  |||| ||||||||| ||||||||||||  |||||||||||||
seq2  GAAGTT--AATC-ATCTTTGAG-ACCTTTCATTATTATTTATTACTACCT  138

seq1  ACTATCTCACAGACACAGGCAGCCAATAGCGTCTATAAAACAGTAAA-TG  199
      |||||||||||||||||||||| ||| |||||||||||||||||||| ||
seq2  ACTATCTCACAGACACAGGCAGGCAAAAGCGTCTATAAAACAGTAAATTG  188

seq1  GTGCAGATGCAAATTTGCAGAAAAATATTATATATGAGTGGAAGTGGTAC  249
       |||||||||||| |||||||||| |||||||||| ||||||||||||| 
seq2  TTGCAGATGCAAAATTGCAGAAAATTATTATATAT-AGTGGAAGTGGTAA  237

seq1  ACCCGAATGCACTAAGTGGTTG-AAAGTATCCCGTGTTTCTGTGTGGTTA  298
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACCCGAATGCACTAAGTGGTTGAAAAGTATCCCGTGTTTCTGTGTGGTTA  287

seq1  CCTTTATTCTAAGATTAGACACATGTGTGGTAAGTGAAGAACCAGATCAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATTCTAAGATTAGACACATGTGTGGTAAGTGAAGAACCAGATCAA  337

seq1  ATGCAGGACAGTGAGATAAAGACAGCATGTGTTAGGAAAGAAGATTTTTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGACAGTGAGATAAAGACAGCATGTGTTAGGAAAGAAGATTTTTT  387

seq1  TCCCTCAAAATATCCTGATTTTGTCAACTAAGAAATGGGGTTATAAATGT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAAAATATCCTGATTTTGTCAACTAAGAAATGGGGTTATAAATGT  437

seq1  ATGGTTAGATTAGGTTAAAATAGGAAGTCAAGAAACCCGTTAATTTTTAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAGATTAGGTTAAAATAGGAAGTCAAGAAACCCGTTAATTTTTAC  487

seq1  AGGATAAGTTGATAAGATAAATATTTTATGCATTGTAAGTTTCTATTCCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAGTTGATAAGATAAATATTTTATGCATTGTAAGTTTCTATTCCC  537

seq1  TAATAATTAAAAATTACAAATTATTTGACTTCCTCAACATTTAATTTAAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAAAAATTACAAATTATTTGACTTCCTCAACATTTAATTTAAA  587

seq1  TATTTAAAATTTTCTAGAAAGGGAATACTAACAGACTCATTTATCTGAAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAAATTTTCTAGAAAGGGAATACTAACAGACTCATTTATCTGAAT  637

seq1  TGATATTACTCTGATAATAAAAATAGACCAGGATACAATAAAAAAAGAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTACTCTGATAATAAAAATAGACCAGGATACAATAAAAAAAGAGA  687

seq1  ACTCTAGAAAAATTTCCCCTCAAAATAGAGTATTTCCCACCAACTAGCAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAGAAAAATTTCCCCTCAAAATAGAGTATTTCCCACCAACTAGCAG  737

seq1  AGGCATTGCCATTTTGGCTTTACCTCTACAAGTTCACACTTTGTCTTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTGCCATTTTGGCTTTACCTCTACAAGTTCACACTTTGTCTTTGA  787

seq1  AAGTCTCCTTTCAGAGATTCTGACTCTGCAATACATTGCTCATTCTCAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCCTTTCAGAGATTCTGACTCTGCAATACATTGCTCATTCTCAAC  837

seq1  TTTGAGGCAAGTTTAATATATCCTGTAAATTTCATGCCTGAACATTCAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGCAAGTTTAATATATCCTGTAAATTTCATGCCTGAACATTCAGT  887

seq1  GCACTGGGTAATGTGCTGCCAATTTCTGTGGCAAGACTAGGAAGACTGGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGGTAATGTGCTGCCAATTTCTGTGGCAAGACTAGGAAGACTGGT  937

seq1  CCCATTTTGTATTACTTCACGTTGATAAGGAATACTAACTACTTTATTTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTTTGTATTACTTCACGTTGATAAGGAATACTAACTACTTTATTTT  987

seq1  ATTAAGAAGAGGTATGAAAGAAAGTGTCTCCTATCTCCCTTGCTGCACCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAGAAGAGGTATGAAAGAAAGTGTCTCCTATCTCCCTTGCTGCACCC  1037

seq1  AAATTTGCTTGCTCTATGAAAGAAGTGGAACAAGTATTAAGGTATTTGCA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGCTTGCTCTATGAAAGAAGTGGAACAAGTATTAAGGTATTTGCA  1087

seq1  TGCTTTGTTAGAACCTGATCCTTTTATTTTCTTTTGTGTTGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTTAGAACCTGATCCTTTTATTTTCTTTTGTGTTGAATTC  1133