BAC Information

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BAC

Clone NameB6Ng01-026E21
Chromosome13 (Build37)
Map Location 4,704,125 - 4,821,883
singlet/doubletdoublet
Overlap geneEG432723
Upstream geneCalml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12, Akr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026E21.bB6Ng01-026E21.g
ACCDH857387DH857388
length1,191971
definitionDH857387|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E21, 5' end.DH857388|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,820,680 - 4,821,883)(4,704,125 - 4,705,112)
sequence
gaattcaaggtcatcccactctgcttagtgagacttaaactacaagggga
aacaataatgagagcctatattcaagagtagaaaagatgaggaaaacatt
aatagacagtccaaaatgagctaggttcattggtttggcatctggtaaga
gtagtgtaccatgacaagtgctgttacaaataagatgataataatctgaa
ctgatgcagggagaaagggattcctgtggatgtcaacacatcttttcagg
gcatccactctataacacaaggttcttccactagatcataaactaccatg
atataacttcaaggatcaagcccttaacatatgcatctttgcagggagat
agaacacttattcaaaccataagtcctccttcactggagctcatccaccc
tattgaggaagcttccttctgtgcagacaactcctatccagtaggaaata
tggcaactcagaaccaactcaagagaaaaaaaatacatggaaatggaaca
aatgcaaagaatgacatatcacaccagcatatgtgttgattctttatgca
gggattggaaaagcaaacagtgtagtggattatagaacattccaggagga
ataatagttggatatttgttgagactccctaacaggcttgtgagcgcttc
aaaagtaactgttttacattctaccaccagcaacattttaaaacaacttg
cttttaagaaggaaagcctcatgggggaaacttatctagaacacaagggg
agaaatgtgatgaattcatactttcttgtgaaatcaaattaaccaagcct
aaaagcaagtatggtacactctacaaaatgaactaaaaaccttacagtaa
aatcaaggaattaggcataaaagcattgacaataaatttacctcagaaat
tttaaagtcaataacatcagctgggagcacattattatggaaattattgg
ctggatattgtagcatatgttatttatccccatataaatcccttaaagta
agcttatgcatcccaattctacagtgaccacctcctatttcatccaaaga
atgaaaacaaatcaaagcaaaaagagagaggattatgctgtggtttgaac
ggtagatcagcataaccaaattgttacctcatgtggtccacgccgaaact
aacaggtcattgtggtgctacctttcaaggagattcttgca
gaattcagctatatttcatggagtcagacatagaagagattgtttttgtg
tgtaaaataagacaatggttcccttttattgttcagaacttaggatatat
agtcacttactgaagtgtatatgagtgggccataaatttattgttattac
aaaaacactaatccatgaattatgactacattttactcagttctagtgtt
ttaacagcaataagactgattaggcggaaagcagattgtgagcactaatt
tctgactatctaaacctgagacctacatttttagtatcatggtcatagaa
cacagtgaataatgagcctttgaaggcttatgtgacattttcgtggaaac
agaaacctcaaagttaatatgaattgcataaaatacatttaggatgtttt
tttctcaacaagggtgaatggaatattacttaatgagtggtggatttttt
atccttcaaaatgattattattcatgtttgagtcctctcaatgtgtcaca
cagacatggtttaattttaatataagaggctttatatgaaacaatataaa
acaccacttataaatattggcatcacagcaacaggacacattaataccaa
gaaatttcaacaaatattctcagcttcaaagataatcaactatattagac
catcactgtcttagatgcaataggaattcttaattggctgagagttaaac
acaagtatagagctactgctaacactcttcttaaagtttaaggaataaag
tatatccctgttagtttggaagatctggagttatcatgctttaattcctc
atattttacgattccatagaagcacattattttaaatgactgtttcattt
caatttctttgcctctatcttttcaaatggcaaaatctgtgtacctgtga
tcttgtaaatggagcaagacacttcaatataattgggatttccctggaga
atactcattagattcttaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4820680_4821883
seq2: B6Ng01-026E21.b_45_1235 (reverse)

seq1  TGCAAGAACATCTCTCTGAAAGGGTAACCACCCACAATGACCTGCTTAGT  50
      |||||||  |||||  ||||| |||| |   ||||||||||||| |||||
seq2  TGCAAGA--ATCTCCTTGAAA-GGTAGC--ACCACAATGACCTG-TTAGT  44

seq1  TTCTGCGTTGTGACACACTGA-GTACCAATTCTGTTATGCTAGATCTACC  99
      ||| ||| ||   |||| ||| ||| |||||  |||||||| ||||||||
seq2  TTCGGCG-TGGACCACA-TGAGGTAACAATTTGGTTATGCT-GATCTACC  91

seq1  GTTTCAAAACCACAGCATAATCCTCTCTCTTTTTGCCTTTGATTTGTTTT  149
      |||   ||||||||||||||||||||||||||||| |||||||||| |||
seq2  GTT--CAAACCACAGCATAATCCTCTCTCTTTTTG-CTTTGATTTG-TTT  137

seq1  TCATTCTTTTGGATGAAATAGGAGATGGTCACTGTAGAATTGTGATGCAT  199
      |||||| ||||||||||||||||| ||||||||||||||||| |||||||
seq2  TCATTC-TTTGGATGAAATAGGAGGTGGTCACTGTAGAATTGGGATGCAT  186

seq1  -AGCTTACTTTAAGGGATTTATATTGGAGATAAATAACATATGCTACAAT  248
       |||||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  AAGCTTACTTTAAGGGATTTATA-TGGGGATAAATAACATATGCTACAAT  235

seq1  ATCCAGCCAATAATTTCCATAATAATGTGCTCCCAGCTGATGTTATTGAC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCCAATAATTTCCATAATAATGTGCTCCCAGCTGATGTTATTGAC  285

seq1  TTTAAAATTTCTGAGGTAAATTTATTGTCAATGCTTTTATGCCTAATTCC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATTTCTGAGGTAAATTTATTGTCAATGCTTTTATGCCTAATTCC  335

seq1  TTGATTTTACTGTAAGGTTTTTAGTTCATTTTGTAGAGTGTACCATACTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTACTGTAAGGTTTTTAGTTCATTTTGTAGAGTGTACCATACTT  385

seq1  GCTTTTAGGCTTGGTTAATTTGATTTCACAAGAAAGTATGAATTCATCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAGGCTTGGTTAATTTGATTTCACAAGAAAGTATGAATTCATCAC  435

seq1  ATTTCTCCCCTTGTGTTCTAGATAAGTTTCCCCCATGAGGCTTTCCTTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCCCCTTGTGTTCTAGATAAGTTTCCCCCATGAGGCTTTCCTTCT  485

seq1  TAAAAGCAAGTTGTTTTAAAATGTTGCTGGTGGTAGAATGTAAAACAGTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGCAAGTTGTTTTAAAATGTTGCTGGTGGTAGAATGTAAAACAGTT  535

seq1  ACTTTTGAAGCGCTCACAAGCCTGTTAGGGAGTCTCAACAAATATCCAAC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTGAAGCGCTCACAAGCCTGTTAGGGAGTCTCAACAAATATCCAAC  585

seq1  TATTATTCCTCCTGGAATGTTCTATAATCCACTACACTGTTTGCTTTTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCCTCCTGGAATGTTCTATAATCCACTACACTGTTTGCTTTTCC  635

seq1  AATCCCTGCATAAAGAATCAACACATATGCTGGTGTGATATGTCATTCTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCTGCATAAAGAATCAACACATATGCTGGTGTGATATGTCATTCTT  685

seq1  TGCATTTGTTCCATTTCCATGTATTTTTTTTCTCTTGAGTTGGTTCTGAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGTTCCATTTCCATGTATTTTTTTTCTCTTGAGTTGGTTCTGAG  735

seq1  TTGCCATATTTCCTACTGGATAGGAGTTGTCTGCACAGAAGGAAGCTTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCATATTTCCTACTGGATAGGAGTTGTCTGCACAGAAGGAAGCTTCC  785

seq1  TCAATAGGGTGGATGAGCTCCAGTGAAGGAGGACTTATGGTTTGAATAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGGGTGGATGAGCTCCAGTGAAGGAGGACTTATGGTTTGAATAAG  835

seq1  TGTTCTATCTCCCTGCAAAGATGCATATGTTAAGGGCTTGATCCTTGAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTATCTCCCTGCAAAGATGCATATGTTAAGGGCTTGATCCTTGAAG  885

seq1  TTATATCATGGTAGTTTATGATCTAGTGGAAGAACCTTGTGTTATAGAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCATGGTAGTTTATGATCTAGTGGAAGAACCTTGTGTTATAGAGT  935

seq1  GGATGCCCTGAAAAGATGTGTTGACATCCACAGGAATCCCTTTCTCCCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCCTGAAAAGATGTGTTGACATCCACAGGAATCCCTTTCTCCCTG  985

seq1  CATCAGTTCAGATTATTATCATCTTATTTGTAACAGCACTTGTCATGGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTTCAGATTATTATCATCTTATTTGTAACAGCACTTGTCATGGTA  1035

seq1  CACTACTCTTACCAGATGCCAAACCAATGAACCTAGCTCATTTTGGACTG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTCTTACCAGATGCCAAACCAATGAACCTAGCTCATTTTGGACTG  1085

seq1  TCTATTAATGTTTTCCTCATCTTTTCTACTCTTGAATATAGGCTCTCATT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTAATGTTTTCCTCATCTTTTCTACTCTTGAATATAGGCTCTCATT  1135

seq1  ATTGTTTCCCCTTGTAGTTTAAGTCTCACTAAGCAGAGTGGGATGACCTT  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCCCCTTGTAGTTTAAGTCTCACTAAGCAGAGTGGGATGACCTT  1185

seq1  GAATTC  1204
      ||||||
seq2  GAATTC  1191

seq1: chr13_4704125_4705112
seq2: B6Ng01-026E21.g_70_1040

seq1  GAATTCAGCTATATTTCATGGAGTCAGACATAGAAGAGATTGTTTTTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTATATTTCATGGAGTCAGACATAGAAGAGATTGTTTTTGTG  50

seq1  TGTAAAATAAGACAATGGTTCCCTTTTATTGTTCAGAACTTAGGATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAATAAGACAATGGTTCCCTTTTATTGTTCAGAACTTAGGATATAT  100

seq1  AGTCACTTACTGAAGTGTATATGAGTGGGCCATAAATTTATTGTTATTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTACTGAAGTGTATATGAGTGGGCCATAAATTTATTGTTATTAC  150

seq1  AAAAACACTAATCCATGAATTATGACTACATTTTACTCAGTTCTAGTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACTAATCCATGAATTATGACTACATTTTACTCAGTTCTAGTGTT  200

seq1  TTAACAGCAATAAGACTGATTAGGCGGAAAGCAGATTGTGAGCACTAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACAGCAATAAGACTGATTAGGCGGAAAGCAGATTGTGAGCACTAATT  250

seq1  TCTGACTATCTAAACCTGAGACCTACATTTTTAGTATCATGGTCATAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTATCTAAACCTGAGACCTACATTTTTAGTATCATGGTCATAGAA  300

seq1  CACAGTGAATAATGAGCCTTTGAAGGCTTATGTGACATTTTCGTGGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGAATAATGAGCCTTTGAAGGCTTATGTGACATTTTCGTGGAAAC  350

seq1  AGAAACCTCAAAGTTAATATGAATTGCATAAAATACATTTAGGATGTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCTCAAAGTTAATATGAATTGCATAAAATACATTTAGGATGTTTT  400

seq1  TTTCTCAACAAGGGTGAATGGAATATTACTTAATGAGTGGTGGATTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAACAAGGGTGAATGGAATATTACTTAATGAGTGGTGGATTTTTT  450

seq1  ATCCTTCAAAATGATTATTATTCATGTTTGAGTCCTCTCAATGTGTCACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTCAAAATGATTATTATTCATGTTTGAGTCCTCTCAATGTGTCACA  500

seq1  CAGACATGGTTTAATTTTAATATAAGAGGCTTTATATGAAACAATATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACATGGTTTAATTTTAATATAAGAGGCTTTATATGAAACAATATAAA  550

seq1  ACACCACTTATAAATATTGGCATCACAGCAACAGGACACATTAATACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCACTTATAAATATTGGCATCACAGCAACAGGACACATTAATACCAA  600

seq1  GAAATTTCAACAAATATTCTCAGCTTCAAAGATAATCAACTATATTAGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCAACAAATATTCTCAGCTTCAAAGATAATCAACTATATTAGAC  650

seq1  CATCACTGTCTTAGATGCAATAGGAATTCTTAATTGGCTGAGAGTTAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACTGTCTTAGATGCAATAGGAATTCTTAATTGGCTGAGAGTTAAAC  700

seq1  ACAAGTATAGAGCTACTGCTAACACTCTTCTTAAAGTTTAAGGAATAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTATAGAGCTACTGCTAACACTCTTCTTAAAGTTTAAGGAATAAAG  750

seq1  TATATCCCTGTTAGTTTGGAAGATCTGGAGTTATCATGCTTTAATTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCTGTTAGTTTGGAAGATCTGGAGTTATCATGCTTTAATTCCTC  800

seq1  AATATTTTACGATTCCATAGAAGGCACATTATTTTTAAATGACTGTTTTC  850
       ||||||||||||||||||||| |||||||| ||||||||||||| ||||
seq2  -ATATTTTACGATTCCATAGAA-GCACATTA-TTTTAAATGACTG-TTTC  846

seq1  ATTTCAATTTTCTTTTGCCTCTATCTTTTCAAATGGCAAAAATCTGTGTA  900
      ||||||||||   |||||||||||||||||||||||| ||||||||||||
seq2  ATTTCAATTT--CTTTGCCTCTATCTTTTCAAATGGC-AAAATCTGTGTA  893

seq1  CCTGTGATCTTTGTAAAATGGAGCAAGACACTTCAATAATAATTGGGATT  950
      ||||||||| |||| |||||||||||||||||||||| |||||||||| |
seq2  CCTGTGATC-TTGT-AAATGGAGCAAGACACTTCAAT-ATAATTGGGA-T  939

seq1  TTCCCTGGAGAAATACCTCCAATTAAGATTCTTTAAAA  988
      |||||||||| |||| |||  ||| |||||||| ||| 
seq2  TTCCCTGGAG-AATA-CTC--ATT-AGATTCTTAAAA-  971