BAC Information

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BAC

Clone NameB6Ng01-026E22
Chromosome13 (Build37)
Map Location 40,548,220 - 40,549,236
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041779, LOC382747, A230103O09Rik, Ofcc1
Downstream geneLOC666894, LOC100039048, Tcfap2a, EG621629, EG637157, LOC100039105, Gcnt2, Pak1ip1, Tmem14c, Mak, EG621771, Gcm2, LOC637277, Elovl2, LOC268650, BC024659, Nedd9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026E22.bB6Ng01-026E22.g
ACCDH857389DH857390
length1,0531,010
definitionDH857389|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E22, 5' end.DH857390|Mus musculus domesticus DNA, BAC clone: B6Ng01-026E22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattattgggtttgttttgttcctttgccttttgtctatttgatc
tcactttttattacttccaaaactggatacattgcctattttcagacttc
tccaataatataaacatttaatgcaaaaaattactcttgtaaaattaatc
tcatcccatatttgtgtgcattttcattatctttccatttccatgtcttc
taatttctgtcatttttttttcctcataaattccttggaagcatggcttt
aatttccaaataagtgcctcttgcttatttggttaggattcttttgttac
tcattttaatctctctttggtgttgtgaaagaactgacaaatagagcatg
tactctttgacacgtgttgagatttgatttatgatgaatatgaaatgtat
gtttcaagcctgggtagtgtataaatccatgcttgttagttaagctgctg
aagtgtcttgtacttccatgtttttgtttgtttgatttaagaagtattga
cagactattttaagattaaagtgtaattatgttatttctcctttctcatt
ctccaaccttcccatcaccctttctgtcacccatgcttgctctcacattc
atggcatccttttctttgttattattgcatatgtaaatgcatggatatgt
aaatacaacttgttcagtctcttcagtgttacttgtatgtaatatgattt
ttggtctaatcagtcagcattggatcaccacttagggtgctcaaccctgg
ggaaggccatttcctcttcctttcagcatcctgtagtgggccataattct
ttgtttagggtggaaactcttgagatttttcccatctgtgttgacttctc
tattggtgttgtccttggtttaaggcttgtttagttagccatattgatga
gatatcatgggtggagcttctctgtcaatgctaggagataccatctcaca
gagatttcctggtccctggctctacatttttctgccttttcttcagaatg
ttccctgggcctaaggtgaaggaattgtggtagagatgatgtatcaagtc
ttg
gaattctttcccccaggggattgcctccttcctctcagattctattgtca
ggagctcaagcattcagcactaagatttaatgatgggctgagtcgttgtc
acttttaggaggtgacttgggtgctggaagttgttctggagaagacaaga
agagcagatagtgcccgcagacacaagagaagttatgaagacggtgaata
gcagaagacatgctgctcttcagcttgccagcgctgcacagagtccctga
actaataatgggaaagtggaaagggtggaaacttaccttgacttactctt
ccaggggttttagtccaatgttatttggttgactccagggggtacctgtg
ttgagtgaacgcaacacggtagaacatacatggtagactaaaacggatca
tcccatagtgggtaaacaacaaggaggagaaaaggaggcccagagtgctc
acatccctctcaagggctcactcctgattacttaacctccttcctcttgg
ccatatctctttaaagattccattacctcccaaatgtgccataggccggt
gatcaaaactctttgtgtcctttagggtatgtttaagatccaagccatta
caggagcagccagagctattgcagttcatttcaacagaacaccgccagat
gaagaaacaacacataaataactcaatacaagatggacagagatagctat
ggtaacaaagggacaaggatctctgaggctgtaggagatagttcatgagg
aaatcatggcccctccttccacccaccccttccttccactcctacttccc
aggactgcagatgttgggtgcctgatattttttcacctcacatacacaat
ggagttaggcaactttggaatgaaagaggattaaacaggagaggtctgat
gagtagcttccaaatgtatcttgggtgggggagagagaaatatataacat
cgcaaaatatggattcatcaatgtgagcacctgtgtatatccttgtgggg
tgtgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_40548220_40549236
seq2: B6Ng01-026E22.g_65_1074

seq1  GAATTCTTTCCCCCAGGGGATTGCCTCCTTCCTCTCAGATTCTATTGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCCCAGGGGATTGCCTCCTTCCTCTCAGATTCTATTGTCA  50

seq1  GGAGCTCAAGCATTCAGCACTAAGATTTAATGATGGGCTGAGTCGTTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCAAGCATTCAGCACTAAGATTTAATGATGGGCTGAGTCGTTGTC  100

seq1  ACTTTTAGGAGGTGACTTGGGTGCTGGAAGTTGTTCTGGAGAAGACAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTAGGAGGTGACTTGGGTGCTGGAAGTTGTTCTGGAGAAGACAAGA  150

seq1  AGAGCAGATAGTGCCCGCAGACACAAGAGAAGTTATGAAGACGGTGAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGATAGTGCCCGCAGACACAAGAGAAGTTATGAAGACGGTGAATA  200

seq1  GCAGAAGACATGCTGCTCTTCAGCTTGCCAGCGCTGCACAGAGTCCCTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGACATGCTGCTCTTCAGCTTGCCAGCGCTGCACAGAGTCCCTGA  250

seq1  ACTAATAATGGGAAAGTGGAAAGGGTGGAAACTTACCTTGACTTACTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATAATGGGAAAGTGGAAAGGGTGGAAACTTACCTTGACTTACTCTT  300

seq1  CCAGGGGTTTTAGTCCAATGTTATTTGGTTGACTCCAGGGGGTACCTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGTTTTAGTCCAATGTTATTTGGTTGACTCCAGGGGGTACCTGTG  350

seq1  TTGAGTGAACGCAACACGGTAGAACATACATGGTAGACTAAAACGGATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTGAACGCAACACGGTAGAACATACATGGTAGACTAAAACGGATCA  400

seq1  TCCCATAGTGGGTAAACAACAAGGAGGAGAAAAGGAGGCCCAGAGTGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATAGTGGGTAAACAACAAGGAGGAGAAAAGGAGGCCCAGAGTGCTC  450

seq1  ACATCCCTCTCAAGGGCTCACTCCTGATTACTTAACCTCCTTCCTCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTCTCAAGGGCTCACTCCTGATTACTTAACCTCCTTCCTCTTGG  500

seq1  CCATATCTCTTTAAAGATTCCATTACCTCCCAAATGTGCCATAGGCCGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATCTCTTTAAAGATTCCATTACCTCCCAAATGTGCCATAGGCCGGT  550

seq1  GATCAAAACTCTTTGTGTCCTTTAGGGTATGTTTAAGATCCAAGCCATTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAAACTCTTTGTGTCCTTTAGGGTATGTTTAAGATCCAAGCCATTA  600

seq1  CAGGAGCAGCCAGAGCTATTGCAGTTCATTTCAACAGAACACCGCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCAGCCAGAGCTATTGCAGTTCATTTCAACAGAACACCGCCAGAT  650

seq1  GAAGAAACAACACATAAATAACTCAATACAAGATGGACAGAGATAGCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAACAACACATAAATAACTCAATACAAGATGGACAGAGATAGCTAT  700

seq1  GGTAACAAAGGGACAAGGATCTCTGAGGCTGTAGGAGATAGTTCATGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACAAAGGGACAAGGATCTCTGAGGCTGTAGGAGATAGTTCATGAGG  750

seq1  AAATCATGGCCCCTCCTTCCACCCACCCCTTCCTTCCACTCCTACTTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATGGCCCCTCCTTCCACCCACCCCTTCCTTCCACTCCTACTTCCC  800

seq1  AGGACTGCAGATGTTGGGTGCCTGATATTTTTTCACCTCACATACACAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGCAGATGTTGGGTGCCTGATATTTTTTCACCTCACATACACAAT  850

seq1  GGAGTTAGGCAACTTTGGAATGAAAGAGGATTAAACAAGGAGAGGTCTGA  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GGAGTTAGGCAACTTTGGAATGAAAGAGGATTAAAC-AGGAGAGGTCTGA  899

seq1  TGAAGTAAGCTTCCAAAATGTATTCTTGGGTGGGGAGAAGAGAAAATATA  950
      || ||| ||||||| ||||||| ||||||||||||   |||| |||||||
seq2  TG-AGT-AGCTTCC-AAATGTA-TCTTGGGTGGGGGAGAGAG-AAATATA  944

seq1  TAACAATCGC-AAATATTGATTCATCAATGTGAGCACCTGTGAGTATCCT  999
      |||| ||||| |||||| ||||||||||||||||||||||||  ||||||
seq2  TAAC-ATCGCAAAATATGGATTCATCAATGTGAGCACCTGTGTATATCCT  993

seq1  TGTGGGGTGTGTGTGTGT  1017
      ||||||||||||| ||||
seq2  TGTGGGGTGTGTG-GTGT  1010