BAC Information

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BAC

Clone NameB6Ng01-027G10
Chromosome13 (Build37)
Map Location 118,769,949 - 118,770,952
singlet/doubletsinglet
Overlap genenone
Upstream geneParp8, LOC668288, LOC623312, Emb, EG623365, LOC382807, Hcn1, LOC100041695
Downstream geneLOC674926, Mrps30, LOC668309, LOC100041278, Fgf10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027G10.bB6Ng01-027G10.g
ACCDH858153DH858154
length1,056989
definitionDH858153|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G10, 5' end.DH858154|Mus musculus domesticus DNA, BAC clone: B6Ng01-027G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcgacaaaatccaacacccattcatgataaaagtcttggaaagatc
aggaattcaaggtccatacctaaacaaaataaaagcaatatacagcaaag
cagtagccaatatcaaaataaatgcagagaaacttgaagcaatcccacta
aaatcagggactagacaaggctgcccactttctccctacctattcaatat
agtacttgaagtcctagccagagcaattcgaaaacaaaaggagatcaaag
gaatacaaattggaaaggaagaagtcaaaatatcactatttgaaaatgat
aagatcatatatataagtgaccctaaaaattccaccaaagatctcctaga
cctgataaactgcttcagtgcagtcagtagctggatataaaattaactca
aacaaatcagtggcctttctctacacaaaagataaacaggatgagaaaga
aattagggaagcaacactcttcacaatagtcacaaataatataaaatgcc
tttgtgtaactttaactaaggaagtgaaagatatgtatgataagaacttc
aagtctctgaagaaagaaattgaagaagacttcagaagatggaaaattct
cccatgctcatggattggaatgatcaatatagtaaaaatggctatcctgc
caaaagcaatctacagattcaatgcaatccccatcattccaactcaattc
ttcacctagttagaaagagcaatttgcaaattcatctggaataacaaaaa
acctacaatagcaaaaactattctcaacaataaaagaacctctggaggaa
tcaccatgcctgaactcaagctgtactacagagaaattgtgattaaaaac
tgcaaggtactggtacagcgacagacaagtagaccatggaatagaattga
agacccagaatgaacccacatacctatggtacttgatcttttttcaagga
gctaaactttcagtgaaaagacagcattcctcacagcggtgctggacaac
tggcggtaacagagaagatgcggatgatccattctaacccttggactaga
tcaaac
gaattctctttaaagagacctccttttaatctgacaaaagtttaacttct
gttttgacaaaacccattcgttctgcttaagaaatatgcatagggcttgg
agagatggctcaatggttaagagcaccagatgctcttccaaaggatcagg
gtttaattcccagcacccatatggtagcccacaaccgtctgcaacttcat
tttaagggatctcagactctcacacagacgtacatataggcaaaatgcca
gtgtacataaattaaaaataaatatgttgctaaaaacaaataagcaaata
aaaaagaaaagaaatatgagtaactctacaccattttaataaatctaata
aaaaactagtggtccttacttttgaagaactgctgtatgcagcaattttt
gtaggtgtgtccagtagcattgtctactcacatgttataagaatagttat
aattacatattaataaagagccagttcacattgagatgaatgatcattta
tgatatattagaaataaagtatcaccaaggactggctatgtttgattaga
cattgtcgccaatgtctgtggaacaggatactaccagttagtttggagaa
actagtttcctttcgaatctgcatcatttccctatcatatattctaattc
cctttcattcttgttcttcttgcccttgtccttcaccctgtactgttttt
tatatgcacagctgatacattttttggttttccaaacttatctgcacttt
tggcaaacccagggtctttcttcagactcagccttcctcacaagtagtgt
ggagggtaacagatagccttatttcttgctctgtcacaaatgaattttat
ttctttgacattagcaaacacaaattcatctgtaacttttgatcgctcta
caaattaagataagtataaatataaacctttggcttgatataaatggctt
ttagagtgttaaatctatttacctttcaagctttttgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_118769949_118770952
seq2: B6Ng01-027G10.g_67_1055 (reverse)

seq1  GTCAAAAATGCATTTGAAAGGGTAAAATTGGATTTAAACACTCCTAAAAA  50
      |||||||| ||  |||||| ||||||  | ||||| |||||||   ||||
seq2  GTCAAAAA-GC--TTGAAA-GGTAAA--TAGATTT-AACACTC--TAAAA  41

seq1  GCCATTTTTATTATCAAGCCAAAGGTTTTATAATTTTATACTTTAATCTT  100
      |||||||    |||||||||||||| ||||||  |||||||||  |||||
seq2  GCCATTT---ATATCAAGCCAAAGG-TTTATA--TTTATACTT--ATCTT  83

seq1  AATTTTGTAGAGCGATCAAAGGTTACATGATGAAATTTGTGTTTTGCTAA  150
      || ||||||||||||||||| |||||| |||| |||||||| ||||||||
seq2  AA-TTTGTAGAGCGATCAAAAGTTACA-GATG-AATTTGTG-TTTGCTAA  129

seq1  TGTCAAAGAAATAAAATTCATTTGTGACAGAGCAAGAAATAAGGCTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAAGAAATAAAATTCATTTGTGACAGAGCAAGAAATAAGGCTATCT  179

seq1  GTTACC--TCACACTACTTGTGAGG-AGGCTGAGTCTGAAGAAAGACCCT  247
      ||||||   |||||||||||||||| ||||||||||||||||||||||||
seq2  GTTACCCTCCACACTACTTGTGAGGAAGGCTGAGTCTGAAGAAAGACCCT  229

seq1  GGGTTTGCCAAAAGTGCAGATAAGTTTGGAAAACC-AAAAATGTATCAGC  296
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GGGTTTGCCAAAAGTGCAGATAAGTTTGGAAAACCAAAAAATGTATCAGC  279

seq1  TGTGCATAT-AAAAACAGTACAGGGTGAAGGACAAGGGCAAGAAGAACAA  345
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATATAAAAAACAGTACAGGGTGAAGGACAAGGGCAAGAAGAACAA  329

seq1  GAATGAAAGGGAATTAGAATATATGATAGGGAAATGATGCAGATTCG-AA  394
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAATGAAAGGGAATTAGAATATATGATAGGGAAATGATGCAGATTCGAAA  379

seq1  GGAAACTAGTTTCTCCAAACTAACTGGTAGTATCCTGTTCCACAGACATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACTAGTTTCTCCAAACTAACTGGTAGTATCCTGTTCCACAGACATT  429

seq1  GGCGACAATGTCTAATCAAACATAGCCAGTCCTTGGTGATACTTTATTTC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGACAATGTCTAATCAAACATAGCCAGTCCTTGGTGATACTTTATTTC  479

seq1  TAATATATCATAAATGATCATTCATCTCAATGTGAACTGGCTCTTTATTA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATCATAAATGATCATTCATCTCAATGTGAACTGGCTCTTTATTA  529

seq1  ATATGTAATTATAACTATTCTTATAACATGTGAGTAGACAATGCTACTGG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTAATTATAACTATTCTTATAACATGTGAGTAGACAATGCTACTGG  579

seq1  ACACACCTACAAAAATTGCTGCATACAGCAGTTCTTCAAAAGTAAGGACC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCTACAAAAATTGCTGCATACAGCAGTTCTTCAAAAGTAAGGACC  629

seq1  ACTAGTTTTTTATTAGATTTATTAAAATGGTGTAGAGTTACTCATATTTC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTTTATTAGATTTATTAAAATGGTGTAGAGTTACTCATATTTC  679

seq1  TTTTCTTTTTTATTTGCTTATTTGTTTTTAGCAACATATTTATTTTTAAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTTATTTGCTTATTTGTTTTTAGCAACATATTTATTTTTAAT  729

seq1  TTATGTACACTGGCATTTTGCCTATATGTACGTCTGTGTGAGAGTCTGAG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTACACTGGCATTTTGCCTATATGTACGTCTGTGTGAGAGTCTGAG  779

seq1  ATCCCTTAAAATGAAGTTGCAGACGGTTGTGGGCTACCATATGGGTGCTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTTAAAATGAAGTTGCAGACGGTTGTGGGCTACCATATGGGTGCTG  829

seq1  GGAATTAAACCCTGATCCTTTGGAAGAGCATCTGGTGCTCTTAACCATTG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTAAACCCTGATCCTTTGGAAGAGCATCTGGTGCTCTTAACCATTG  879

seq1  AGCCATCTCTCCAAGCCCTATGCATATTTCTTAAGCAGAACGAATGGGTT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTCTCCAAGCCCTATGCATATTTCTTAAGCAGAACGAATGGGTT  929

seq1  TTGTCAAAACAGAAGTTAAACTTTTGTCAGATTAAAAGGAGGTCTCTTTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAACAGAAGTTAAACTTTTGTCAGATTAAAAGGAGGTCTCTTTA  979

seq1  AAGAGAATTC  1004
      ||||||||||
seq2  AAGAGAATTC  989