BAC Information

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BAC

Clone NameB6Ng01-027L11
Chromosome13 (Build37)
Map Location 81,070,490 - 81,071,105
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382780, EG666933, Arrdc3
Downstream geneLOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik, Cetn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027L11.bB6Ng01-027L11.g
ACCDH858386DH858387
length1,278617
definitionDH858386|Mus musculus domesticus DNA, BAC clone: B6Ng01-027L11, 5' end.DH858387|Mus musculus domesticus DNA, BAC clone: B6Ng01-027L11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagggccatacctaaacaaaataaaagcaatatactgcaaacca
gtagccaacatcaaactaaatggagagaaacttgaaacagtcccattaaa
atcagggactagacaaggcggcccacttcctacctacctattcaatatag
tatttgaaatcctagctagagcaattagacaacaaaaagagatcaaggtc
aagaagttacaaaatggaaagaagtcaaaatattactatttgcagacgat
atgatagtatatataagtgatcctaaaaattccaccagggaactcctaaa
cctgataaacagcttcaatgaagtagctggatataaaattaactcaaaca
aatcagtgtcctttctttacacaaaggataagcaggctgagaaagaatat
agggaaacaacacccttcacagtaatcacaaataatataaaataccttgg
tgtgactctaactaaggaagtgaaagatctgtatgagaagaacttcaagt
ctctgaagaaagaaatcaaagatgatctcagaagatggaaagatcttcca
tgctcatggattattaattgcagatgacatattatacataagtgacctta
aaaattctactagggaacccctatattagataaacacattcagcaaagta
gctggtacaaaatttactcacaaaatcagaggctactctatagataaaat
ataactggacagagaaagaaatcagagaaacaacatctttcacaatagcc
tcaagtaataaaaaatatcttggtgtaacattaaccaaacaagtacaaga
attgcaggacaaaaacttcaaggctttgaagaaaggaattgaagaagcta
taagagtatggaaatatcccctgtactcatgtttcagtaggattacaaga
tcaaaatgaacattctatcaaagcatttacagattcatgcaatccccatc
aaatttccatacaagtatttacagatcttaaaagacagttctcatttcat
atggaaaaaaatcgaacaacaaaaaacttgcaaagataaaacatcctgaa
cataaaaggctgctggagtatcaccatgcctgatttcagttctctaccag
accataggagaaggcctgattgccataaaataaattatccggaatactgt
agaaacgaacaataacaccatgaaacctgaatttttagaagcgatatccc
tgaacgcaactcaaatagctatcaatgaactgccttcgctgcgcacggaa
ctggtgcgcagatcgtgcacgccacgat
gaattcacataggttcatctccctctgttgtcctggtgctgggattaaag
gcatgcacactatgcctattaccacagactctgactggccttcttttgga
gggaggtttattttggttcagagatgctggggttccagcccatgctcagt
cagccttgttggtttaagcctgtgatgaggcagtctttcagaggggtatg
tgtggtagagtgaccttcttacatcatagcaggcagaaagcaaatagagt
tgagaaggtcaggttcccattgtccttcgcttttttttctttttgaagcg
agtgtctctgtgtatttctggctgttttggaactcactttgtaggccagg
ttggcctccaacacatagacctccacctgcctatgcttcctgagtgtttg
cattgaagacatgcaccatcatgcctggcccactatccttttccaaggta
tatacatgccctatgttgctcagtatagctctaacttcctcccacagacc
ctaccatttaaagcttccactattccccaataaggtttgtgtgcacaggc
agataggaatattctcacagtgaaggtaacatttaaacagagatctgacc
aaagtattagattgtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81070490_81071105
seq2: B6Ng01-027L11.g_68_683 (reverse)

seq1  CACAATCTAATACTTTGGTCAGATCTCTGTTTAAATGTTACCTTCACTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCTAATACTTTGGTCAGATCTCTGTTTAAATGTTACCTTCACTGT  50

seq1  GAGAATATTCCTATCTGCCTGTGCACACAAACCTTATTGGGGAATAGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATTCCTATCTGCCTGTGCACACAAACCTTATTGGGGAATAGTGG  100

seq1  AAGCTTTAAATGGTAGGGTCTGTGGGAGGAAGTTAGAGCTATACTGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTAAATGGTAGGGTCTGTGGGAGGAAGTTAGAGCTATACTGAGCA  150

seq1  ACATAGGGCATGTATATACCTTGGAAAAGGATAGTGGGCCAGGCATGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGGGCATGTATATACCTTGGAAAAGGATAGTGGGCCAGGCATGATG  200

seq1  GTGCATGTCTTCAATGCAAACACTCAGGAAGCATAGGCAGGTGGAGGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATGTCTTCAATGCAAACACTCAGGAAGCATAGGCAGGTGGAGGTCT  250

seq1  ATGTGTTGGAGGCCAACCTGGCCTACAAAGTGAGTTCCAAAACAGCCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTGGAGGCCAACCTGGCCTACAAAGTGAGTTCCAAAACAGCCAGA  300

seq1  AATACACAGAGACACTCGCTTCAAAAAGAAAAAAAAGCGAAGGACAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACACAGAGACACTCGCTTCAAAAAGAAAAAAAAGCGAAGGACAATGG  350

seq1  GAACCTGACCTTCTCAACTCTATTTGCTTTCTGCCTGCTATGATGTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTGACCTTCTCAACTCTATTTGCTTTCTGCCTGCTATGATGTAAGA  400

seq1  AGGTCACTCTACCACACATACCCCTCTGAAAGACTGCCTCATCACAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTCTACCACACATACCCCTCTGAAAGACTGCCTCATCACAGGCT  450

seq1  TAAACCAACAAGGCTGACTGAGCATGGGCTGGAACCCCAGCATCTCTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAACAAGGCTGACTGAGCATGGGCTGGAACCCCAGCATCTCTGAA  500

seq1  CCAAAATAAACCTCCCTCCAAAAGAAGGCCAGTCAGAGTCTGTGGTAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATAAACCTCCCTCCAAAAGAAGGCCAGTCAGAGTCTGTGGTAATA  550

seq1  GGCATAGTGTGCATGCCTTTAATCCCAGCACCAGGACAACAGAGGGAGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGTGTGCATGCCTTTAATCCCAGCACCAGGACAACAGAGGGAGAT  600

seq1  GAACCTATGTGAATTC  616
      ||||||||||||||||
seq2  GAACCTATGTGAATTC  616