BAC Information

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BAC

Clone NameB6Ng01-029G10
Chromosome13 (Build37)
Map Location 81,015,342 - 81,016,337
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98, Lysmd3, Polr3g, 2900024O10Rik, Cetn3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029G10.bB6Ng01-029G10.g
ACCDH859612DH859613
length1,045991
definitionDH859612|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G10, 5' end.DH859613|Mus musculus domesticus DNA, BAC clone: B6Ng01-029G10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttaccatgaagggatgatgaattttg
tcaaatgctttttgagcatctaatgaaatgatcacgtgttttttttttct
ttgagtttgtttatgtagtgaattacattgattgatttccacatattgaa
tcatccctgggatgaagcctacttgatcgtagtaaatgatccttttgatg
tgttcttagatttatttggcaagaatttttttgagtatttttgcatcaaa
gttcataagggagattcatatgtagttctctttcttggttgagtctttgt
gtggtttaggtataagcataattatggcttcatagaacaaattgggtagt
gttccttctgtttctatttttgtggaatagtttgcagcgtagtggtatta
ggttttttaaatgtctggtagaattctgccctaaacccatctgttcctgg
acattttttatttattgggagactattaaggactgcttttatttctttag
gggttatgggtctgtttagatggtttatccgatcctgttttaactttggc
acttggtatatgtttagaaaaattgtacattttaaccagattttccaatt
tagttgagtataaacttttgtagtagaatcgaatgatttggttttttttt
ttttttttttgatttccatggtttccgttatgtctcccttttcatttctg
atttttttaatttggatactttctctgtgcctcaggttaggctggctaag
ggtttatctatcttgttgattttctcaaagaaccagctcctagttctgtt
gattctttgtacagttctttttgtttctaattggttgatttcagccctga
gtctgattatttcctgctgtctactccttttgggtgtattgtttcttttt
cttctagagcttcagtgtgctgtcaagctgctggtggaagctctcttcag
tttcttttggaggcacaagagtataagttttctcttacacttgcttccat
gtgttcaaagtttgtatattgtgtcttcatttcattaaacttaaa
gaattctgtggagaatgtctgaagacagtactgctgcaggagacaatcac
tgtgtctgccactgggggatgcccaaaaccaccttcatatctaagccaca
acctaaatttttttgtttaaatctttgttaaagaaagtatgaggcataat
attatcaagtatcttttaacaccaactttactgatagaggtttttcaaaa
accttaatggaaaataaaaaactattttttaatcatcccaactgtgctta
taaacaaaagtcttttaataaaaacggttcagcatgggtgttgaactgtg
cgttcatgtgttttgtttagataaattgttatttgtaggaaatggatgga
agttagaagcataagttaagcaaaataagccagactcagacaaatataat
ttagatttaaaaggaaaaaaatagatatgcattattgggagatgtagagg
gaaatgagcaggaaaggtacagtggacttcagagggtgatagtgtgaaga
atatgatcaatgtacaaaggtacctatgtgaaagtgaccaatgtgggaag
ataaactcataagtgtattagtggcacacatagtatgggggtaacctggt
gttttctgattagatttcagactcactccactgagggaaacaaatgagtg
gtgctataaatatggcctagaacccatggttggggagttcccaggctcca
agaatgaatcttgtactaccattctgttaaatgggcattatccctgtctt
agttagggttttactgctgtgaacagacaccatgactaaggcaactctta
caaggatgacatttaactggggctagttacaggttcagagatcagtccgg
tatcatcaggcagaaacatgacagtgtctaggcaggcacgatgcaggagg
agcttagaattctatgtcttcatctgaagctgctagagaaatactcacct
ccggcagctatactagggtactaaagccataaacatgacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_81015342_81016337
seq2: B6Ng01-029G10.g_66_1056

seq1  GAATTCTGTGGAGAATGTCTGAAGACAGTACTGCTGCAGGAGACAATCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGAGAATGTCTGAAGACAGTACTGCTGCAGGAGACAATCAC  50

seq1  TGTGTCTGCCACTGGGGGATGCCCAAAACCACCTTCATATCTAAGCCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTGCCACTGGGGGATGCCCAAAACCACCTTCATATCTAAGCCACA  100

seq1  ACCTAAATTTTTTTGTTTAAATCTTTGTTAAAGAAAGTATGAGGCATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAAATTTTTTTGTTTAAATCTTTGTTAAAGAAAGTATGAGGCATAAT  150

seq1  ATTATCAAGTATCTTTTAACACCAACTTTACTGATAGAGGTTTTTCAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCAAGTATCTTTTAACACCAACTTTACTGATAGAGGTTTTTCAAAA  200

seq1  ACCTTAATGGAAAATAAAAAACTATTTTTTAATCATCCCAACTGTGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATGGAAAATAAAAAACTATTTTTTAATCATCCCAACTGTGCTTA  250

seq1  TAAACAAAAGTCTTTTAATAAAAACGGTTCAGCATGGGTGTTGAACTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAAAAGTCTTTTAATAAAAACGGTTCAGCATGGGTGTTGAACTGTG  300

seq1  CGTTCATGTGTTTTGTTTAGATAAATTGTTATTTGTAGGAAATGGATGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCATGTGTTTTGTTTAGATAAATTGTTATTTGTAGGAAATGGATGGA  350

seq1  AGTTAGAAGCATAAGTTAAGCAAAATAAGCCAGACTCAGACAAATATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGAAGCATAAGTTAAGCAAAATAAGCCAGACTCAGACAAATATAAT  400

seq1  TTAGATTTAAAAGGAAAAAAATAGATATGCATTATTGGGAGATGTAGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATTTAAAAGGAAAAAAATAGATATGCATTATTGGGAGATGTAGAGG  450

seq1  GAAATGAGCAGGAAAGGTACAGTGGACTTCAGAGGGTGATAGTGTGAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGCAGGAAAGGTACAGTGGACTTCAGAGGGTGATAGTGTGAAGA  500

seq1  ATATGATCAATGTACAAAGGTACCTATGTGAAAGTGACCAATGTGGGAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCAATGTACAAAGGTACCTATGTGAAAGTGACCAATGTGGGAAG  550

seq1  ATAAACTCATAAGTGTATTAGTGGCACACATAGTATGGGGGTAACCTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTCATAAGTGTATTAGTGGCACACATAGTATGGGGGTAACCTGGT  600

seq1  GTTTTCTGATTAGATTTCAGACTCACTCCACTGAGGGAAACAAATGAGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCTGATTAGATTTCAGACTCACTCCACTGAGGGAAACAAATGAGTG  650

seq1  GTGCTATAAATATGGCCTAGAACCCATGGTTGGGGAGTTCCCAGGCTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTATAAATATGGCCTAGAACCCATGGTTGGGGAGTTCCCAGGCTCCA  700

seq1  AGAATGAATCTTGTACTACCATTCTGTTAAATGGGCATTATCCCTGTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAATCTTGTACTACCATTCTGTTAAATGGGCATTATCCCTGTCTT  750

seq1  AGTTAGGGTTTTACTGCTGTGAACAGACACCATGACCAAGGCAACTCTTA  800
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTTAGGGTTTTACTGCTGTGAACAGACACCATGACTAAGGCAACTCTTA  800

seq1  CAAGGATGACATTTAACTGGGGCTAGTTACAGGTTCAGAGATTCAGTCCG  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAGGATGACATTTAACTGGGGCTAGTTACAGGTTCAGAGA-TCAGTCCG  849

seq1  GTATCATCAAGGCAGAAACATGACAGTGTCTAGGCAGGCACGATGCAGGA  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTATCATC-AGGCAGAAACATGACAGTGTCTAGGCAGGCACGATGCAGGA  898

seq1  GGAGCTTAGAGTTCTATGTCTTCATCTGAAGGCTGCTAGCAGAATACTCA  950
      |||||||||| ||||||||||||||||||| ||||||||   ||||||||
seq2  GGAGCTTAGAATTCTATGTCTTCATCTGAA-GCTGCTAGAGAAATACTCA  947

seq1  CCTCCAGGCAGCTAGAACTAGGGTACTAAAGCCATAACCATGACAC  996
      ||||| ||||||||  ||||||||||||||||||||| ||||||||
seq2  CCTCC-GGCAGCTA-TACTAGGGTACTAAAGCCATAAACATGACAC  991