BAC Information

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BAC

Clone NameB6Ng01-029K04
Chromosome13 (Build37)
Map Location 80,780,113 - 80,781,169
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666925, LOC382780, EG666933
Downstream geneArrdc3, LOC666964, LOC100043074, LOC218368, LOC666979, EG666984, Gpr98
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029K04.bB6Ng01-029K04.g
ACCDH859784DH859785
length1,0561,155
definitionDH859784|Mus musculus domesticus DNA, BAC clone: B6Ng01-029K04, 5' end.DH859785|Mus musculus domesticus DNA, BAC clone: B6Ng01-029K04, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctaagtatataagagtaacatattgatacaaaaagtatattgt
caattatatattcttttatatgtatttatatataatatataattattata
tatactagctcataattaaagaggaagaggtcaatttggcagggagtgtg
gaggacacagtgggactttagggtgggtaattggcatgtggaaatgatgt
aactatagtactcatgcatgaaattcttttaaaaaagaactttaggtaag
aaaactgcttttgtattttgtggagaaacaggctttgagcatatttgggc
agcctgcatcttggaaggaaatcctaacgtcactctcagatgtcatcctc
atctccccttgagtagctattttaccatctggagagcatcctacaacaga
tggacaacccacatctcagttcacatcacagttttagttttgctgtcttt
gtgcccactaggctgtgtcttagcaagagcagaaaggtggaaaggggagg
gagtccgtactgtctgtgtgtttgaagcccattattagaaactggatgtt
tgtacaatactatgagaatctttgaagggaacctgaaatttcaaacagat
tggaacagcagacaataagtctttagagctatttcaaatgtgtcaagttt
acactgaaaaaactgtttccttttaaaaataccttcaggattctttactt
atactgagacctggattcactattaaaaatcagaagcaaagtgaaatctt
tttaaaaatgacacttgaagaaaacaataattgcttatattgacaaaaag
tagaacataagttaaaactgtatttttttataaaaaagtgaatttttggt
ttaaatcatgaactatcattgacattgccactgaagacttttttcttaag
tacatgcattgtttgactaggaaggctgactgttcattacttttaaggaa
atatttgcaaatattgttgatgctagctctattctggatggtgaacatag
cctggctttaaaaactgtcatgctgcctcccaattaaccagtggctcttt
ggtgcc
gaattcaatgaaaataaagacacagcaaacccaaacttgtgggatacaat
gaaaggattgcaagtaggaaaattcattgccttcttaaaaaaaaatttgg
aagaaatgatttcctacactagcaacttaacagtacatctgaaagcccta
gaacaaaaagaagcaaacacactacaaggtaattatgattggtaaataag
gatgtaaagagtcaatagctgattagaagagacaggggtggggtttagat
ttcttgggcttggagagaaaggaccagggagggcggggagaaagaagaag
ctgccatgggagaaaggaagaagtcaaagtatcgctatctgcacacatat
tgtagattatataaatgaccctaagaattgcaacagaactcctacaactg
ataaacactttcagtaatgtggctagatacacacaaaattaactcataaa
aatcagtagccttcctatatacaacggacacatgagctgagaaagaaata
gggaaacaatgttttatcattttattgctgtgaagaaacaccatgaccat
ggcaactcctataaaaaacaaaacaaacaaacaaaagcaaaacaaacaaa
acaacaacaacaaaaaaaaaacatttatttgaggctggcttacagtttca
gatgtttagtccattattgtcatagcagtgttcaggcagacatagtgcta
agagttctacatcttaatccagagacaggaaaaggagactgtcttataca
ttgaatgcagctagagaatagaaaaactcagtctaccaacacagtgacac
atttcctccaacaataccataactcctaatagtgccacttcctatggccc
aaacattcaaacacatgagtctttgtggtcatatcttttcaaacaccaca
caaatatttcacaattttctgaaatatataaaatatcttatcagtgtctc
taacaggaagtgggatgtttgtttggtaaaatccaatattgaggaaagaa
taaaagaatcaagatgaaagattcccatgtcatgggataactagtaaaat
gcttactcctccacaaatcaagttctccgatctgagcgcatttcaacttc
aggacagatcaacgtgctaaacatctacattaagagacttcttaagatac
atctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_80780113_80781169
seq2: B6Ng01-029K04.b_44_1099 (reverse)

seq1  GGCACCAAAGAGCCACTGGTTAATTTGTGAGGCAGCATGACAGTTTCTAA  50
      ||||||||||||||||||||||| ||| |||||||||||||||||| |||
seq2  GGCACCAAAGAGCCACTGGTTAA-TTGGGAGGCAGCATGACAGTTTTTAA  49

seq1  AGCCAGGCTATGTTCACCATCCAGATAGGAGCTAGCATCAACAATATTTG  100
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  AGCCAGGCTATGTTCACCATCCAGAATAGAGCTAGCATCAACAATATTTG  99

seq1  CAAATATTTCCTTAAAAGTAATGAACAGTCAGCCTTCCTAGTCAAACAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTTCCTTAAAAGTAATGAACAGTCAGCCTTCCTAGTCAAACAAT  149

seq1  GCATGTACTTAAGAAAAAAGTCTTCAGTGGCAATGTCAATGATAGTTCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTACTTAAGAAAAAAGTCTTCAGTGGCAATGTCAATGATAGTTCAT  199

seq1  GATTTAAACCAAAAATTCACTTTTTTATAAAAAAATACAGTTTTAACTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAACCAAAAATTCACTTTTTTATAAAAAAATACAGTTTTAACTTA  249

seq1  TGTTCTACTTTTTGTCAATATAAGCAATTATTGTTTTCTTCAAGTGTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTACTTTTTGTCAATATAAGCAATTATTGTTTTCTTCAAGTGTCAT  299

seq1  TTTTAAAAAGATTTCACTTTGCTTCTGATTTTTAATAGTGAATCCAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAAGATTTCACTTTGCTTCTGATTTTTAATAGTGAATCCAGGTC  349

seq1  TCAGTATAAGTAAAGAATCCTGAAGGTATTTTTAAAAGGAAACAGTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATAAGTAAAGAATCCTGAAGGTATTTTTAAAAGGAAACAGTTTTT  399

seq1  TCAGTGTAAACTTGACACATTTGAAATAGCTCTAAAGACTTATTGTCTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTAAACTTGACACATTTGAAATAGCTCTAAAGACTTATTGTCTGC  449

seq1  TGTTCCAATCTGTTTGAAATTTCAGGTTCCCTTCAAAGATTCTCATAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAATCTGTTTGAAATTTCAGGTTCCCTTCAAAGATTCTCATAGTA  499

seq1  TTGTACAAACATCCAGTTTCTAATAATGGGCTTCAAACACACAGACAGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAAACATCCAGTTTCTAATAATGGGCTTCAAACACACAGACAGTA  549

seq1  CGGACTCCCTCCCCTTTCCACCTTTCTGCTCTTGCTAAGACACAGCCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACTCCCTCCCCTTTCCACCTTTCTGCTCTTGCTAAGACACAGCCTAG  599

seq1  TGGGCACAAAGACAGCAAAACTAAAACTGTGATGTGAACTGAGATGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCACAAAGACAGCAAAACTAAAACTGTGATGTGAACTGAGATGTGGG  649

seq1  TTGTCCATCTGTTGTAGGATGCTCTCCAGATGGTAAAATAGCTACTCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCATCTGTTGTAGGATGCTCTCCAGATGGTAAAATAGCTACTCAAG  699

seq1  GGGAGATGAGGATGACATCTGAGAGTGACGTTAGGATTTCCTTCCAAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGAGGATGACATCTGAGAGTGACGTTAGGATTTCCTTCCAAGAT  749

seq1  GCAGGCTGCCCAAATATGCTCAAAGCCTGTTTCTCCACAAAATACAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTGCCCAAATATGCTCAAAGCCTGTTTCTCCACAAAATACAAAAG  799

seq1  CAGTTTTCTTACCTAAAGTTCTTTTTTAAAAGAATTTCATGCATGAGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTCTTACCTAAAGTTCTTTTTTAAAAGAATTTCATGCATGAGTAC  849

seq1  TATAGTTACATCATTTCCACATGCCAATTACCCACCCTAAAGTCCCACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTACATCATTTCCACATGCCAATTACCCACCCTAAAGTCCCACTG  899

seq1  TGTCCTCCACACTCCCTGCCAAATTGACCTCTTCCTCTTTAATTATGAGC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTCCACACTCCCTGCCAAATTGACCTCTTCCTCTTTAATTATGAGC  949

seq1  TAGTATATATAATAATTATATATTATATATAAATACATATAAAAGAATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATATAATAATTATATATTATATATAAATACATATAAAAGAATAT  999

seq1  ATAATTGACAATATACTTTTTGTATCAATATGTTACTCTTATATACTTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGACAATATACTTTTTGTATCAATATGTTACTCTTATATACTTAG  1049

seq1  GGAATTC  1057
      |||||||
seq2  GGAATTC  1056