BAC Information

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BAC

Clone NameB6Ng01-030P05
Chromosome13 (Build37)
Map Location 71,348,039 - 71,348,924
singlet/doubletsinglet
Overlap genenone
Upstream gene4930520P13Rik, EG633042, BC018507, EG620473, Adamts16, 8030423J24Rik
Downstream geneLOC627230, LOC100042360, Irx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030P05.b
ACCDH860705
length885
definitionDH860705|Mus musculus domesticus DNA, BAC clone: B6Ng01-030P05, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatttgtctttcaagcactagatccttgactaaagcccctag
catgccaaagcatcattgttggattatattgaagttcttaattataaaaa
tgacttggttagcgttagcactcttgtgttctgtaggaggcatttccagg
ccccattctctaccacagacttaatataagaagcattaaatatgagtctc
ttctgtagaatgctataaacccgtgtttgagactgaaaatacaaatattt
ttatatcttcattttataagacttatataattttaaaattttgaccctcc
cagctggaaaatgtttatgcatacaaaaccctgacacattctctgtggga
agtggtcaacttctcacccctccatttcccatgcgccaattcttttcaga
ctgcccaatagaacaagacagtgaggttacaccacagccaatggggaaag
acacagtcactacctgagttatgccttctgtctgtatgcttttgtctttt
gagcacacttctttgaccaagaataaagtttaccttgttcagaaacttca
gttagatctggagtggtagtctctttctttacaaacccaaacttgtttct
aacatttaaccaggtattttctgacctcaggttttcctgatctggtgttt
agctctctgctcagtgttgctgtgtgtgaaggtacagtgagcagaagcca
gaagcttctcgtgtagaatttctacaaagtagggtcccagacagggctgc
cctccaaggggccttcctctcctcttggttgtgagtctctcagaagagta
gctactccccctgaagtgtcccacgtgcacctgtgctccctgactgtcag
agctcaaggagttttgggagaggtgggggaattgt
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_71348039_71348924
seq2: B6Ng01-030P05.b_44_928

seq1  GAATTCTCCATTTGTCTTTCAAGCACTAGATCCTTGACTAAAGCCCCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTTGTCTTTCAAGCACTAGATCCTTGACTAAAGCCCCTAG  50

seq1  CATGCCAAAGCATCATTGTTGGATTATATTGAAGTTCTTAATTATAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAAAGCATCATTGTTGGATTATATTGAAGTTCTTAATTATAAAAA  100

seq1  TGACTTGGTTAGCGTTAGCACTCTTGTGTTCTGTAGGAGGCATTTCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTGGTTAGCGTTAGCACTCTTGTGTTCTGTAGGAGGCATTTCCAGG  150

seq1  CCCCATTCTCTACCACAGACTTAATATAAGAAGCATTAAATATGAGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCATTCTCTACCACAGACTTAATATAAGAAGCATTAAATATGAGTCTC  200

seq1  TTCTGTAGAATGCTATAAACCCGTGTTTGAGACTGAAAATACAAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGAATGCTATAAACCCGTGTTTGAGACTGAAAATACAAATATTT  250

seq1  TTATATCTTCATTTTATAAGACTTATATAATTTTAAAATTTTGACCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATCTTCATTTTATAAGACTTATATAATTTTAAAATTTTGACCCTCC  300

seq1  CAGCTGGAAAATGTTTATGCATACAAAACCCTGACACATTCTCTGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGAAAATGTTTATGCATACAAAACCCTGACACATTCTCTGTGGGA  350

seq1  AGTGGTCAACTTCTCACCCCTCCATTTCCCATGCGCCAATTCTTTTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAACTTCTCACCCCTCCATTTCCCATGCGCCAATTCTTTTCAGA  400

seq1  CTGCCCAATAGAACAAGACAGTGAGGTTACACCACAGCCAATGGGGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAATAGAACAAGACAGTGAGGTTACACCACAGCCAATGGGGAAAG  450

seq1  ACACAGTCACTACCTGAGTTATGCCTTCTGTCTGTATGCTTTTGTCTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTCACTACCTGAGTTATGCCTTCTGTCTGTATGCTTTTGTCTTTT  500

seq1  GAGCACACTTCTTTGACCAAGAATAAAGTTTACCTTGTTCAGAAACTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACACTTCTTTGACCAAGAATAAAGTTTACCTTGTTCAGAAACTTCA  550

seq1  GTTAGATCTGGAGTGGTAGTCTCTTTCTTTACAAACCCAAACTTGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGATCTGGAGTGGTAGTCTCTTTCTTTACAAACCCAAACTTGTTTCT  600

seq1  AACATTTAACCAGGTATTTTCTGACCTCAGGTTTTCCTGATCTGGTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTAACCAGGTATTTTCTGACCTCAGGTTTTCCTGATCTGGTGTTT  650

seq1  AGCTCTCTGCTCAGTGTTGCTGTGTGTGAAGGTACAGTGAGCAGAAGCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTGCTCAGTGTTGCTGTGTGTGAAGGTACAGTGAGCAGAAGCCA  700

seq1  GAAGCTTCTCGTGTAGAATTTCTACAAGGTAGGGTCCCAGACAGGGCTGC  750
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAGCTTCTCGTGTAGAATTTCTACAAAGTAGGGTCCCAGACAGGGCTGC  750

seq1  CCTCCAAGGGGCCTTCCTCTCCTCTTGGTTGTGAGTCTCTCAGGAAGAGT  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCTCCAAGGGGCCTTCCTCTCCTCTTGGTTGTGAGTCTCTCA-GAAGAGT  799

seq1  AGCTACTCCCCCTGAAGTGTCCCACGTGCACCTGTGCTCCCTGACTGTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTACTCCCCCTGAAGTGTCCCACGTGCACCTGTGCTCCCTGACTGTCA  849

seq1  GAGCTCAGGGAGTTTTGGGAGAGGTGGGGGAAATGT  886
      ||||||| |||||||||||||||||||||||| |||
seq2  GAGCTCAAGGAGTTTTGGGAGAGGTGGGGGAATTGT  885