BAC Information

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BAC

Clone NameB6Ng01-031J01
Chromosome13 (Build37)
Map Location 62,801,202 - 62,801,761
singlet/doubletsinglet
Overlap geneEG435366
Upstream geneEG623505, LOC665415, LOC673332, BC052688, EG638502, LOC100041382, EG633250, EG624180, LOC100041420, LOC665444, EG630579, EG630594, LOC665455, LOC100041430, LOC100041962, LOC100041437, LOC100041979, LOC100041986, 8430426H19Rik, LOC100041455, 6720457D02Rik, EG665503, LOC100041493, LOC630857, EG630978
Downstream geneLOC380850, LOC630951, Fbp2, Fbp1, LOC100042090, EG665524, 2010111I01Rik, Fancc, Ptch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031J01.bB6Ng01-031J01.g
ACCDH861142DH861143
length994787
definitionDH861142|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J01, 5' end.DH861143|Mus musculus domesticus DNA, BAC clone: B6Ng01-031J01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaagtgaggaatctcaaatggctgagaaacacctaaagaaatg
ttcaaagtccttagtgatcagagaagtgccaatcaaaaggaacctgagat
ttcactgtacaccagtcagaatggctaagatcaaaacctaaggtgacaac
acatattggagaggacgtggataaagaggaacattcctccattgagatgg
caaactggtacaaccactctggaaatcaatctggaggttcctcagaaaat
tggaaatagatctacctgaagacccagttataacactcttgggaatatac
ccaaaagatgccccccaccatgccaaaggggcaggtgttccactatgttc
atagttgccttatttgtgatagccagaagctggaaacaacctagatgtcc
caggacagaagaatggatacagaaaaggtggttcatttacacaatggaat
actactcagctattaagaactaggacatcctgagttttgcaggcaaatgg
acggatctagaaaatatcattctgtgtgaggtaactctcacccaaaagga
catgcatggtatgtacacacaaccaaaaggacatgcatggcatgtactca
ttaataactggatattagcggctggcgagatggctcagtggttaagagcg
ccgactgcccttcctaaggtcccaagttcaaatcccagcaaccacatggt
ggcttacaaccatctgtaatgaaatctgatgtcctcttctggagtatctg
aggatagctacagtgtacttacatataaataaataaataaataaataaat
aaataaatcttaaaagaaaaaaaaactggatattagccaaaaagaaagaa
aaaggaaaaaaaaaaaaaccctatacacaagacaagtccacagaattcaa
aggctcaacaagctgaagtgaccaagtgaagatgcctcattcccacttgg
gagaaagaagaaagcaacaatcacaagtgggggagggagggagc
gaattcatagtggagagaaaccctacaaatgtaatgaatgtgataaagta
tttagacaaagcagtgatctccaaaagcatagaaggacacacacaggaga
aaaaccctacaaatgtaatcagtgtgagaaagtcttctcccaacatcatc
atctccaaatccataaaagatcacatactggagagaaacccttcaaatgt
aatgaatgtgataaagccttttcacaacttggtaacctccagtcacatag
acgaattcatactggagagaaaccctacaaatgtaatacatgtgagaaag
ccttttcacaacatagtcatctccagtcacatagaagaattcatactgga
gagaaaccctacagatgtaataaatgtgagaaagccttttcacaacatag
taacctccagtcgcatagaagaattcataatggagagaaatcctttaaat
gtaataaatgtgagaaagcctttttacaacactatagcctccaaagacat
aaaagaatacatactggatagaaacacaatgaatgtgatctatgtgtgaa
agcctgtgtatgtcacaggcatcttcaaaagcataaaagaattcatactg
tagagaaagcttatgaatgtatacaatatgtaaaatctacaaatatctag
tcttaatcatcatgaacatattgtattggcaagaaaccctctgaatatta
tctgtgtggtaaaacgtatcccaacacacttatctcccaatacatcaagg
agcacatactggggagacagaggtggggggttgggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_62801202_62801761
seq2: B6Ng01-031J01.g_292_851 (reverse)

seq1  TCCCCAACCCCCCACCTCTGTCTCCCCAGTATGTGCTCCTTGATGTATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACCCCCCACCTCTGTCTCCCCAGTATGTGCTCCTTGATGTATTG  50

seq1  GGAGATAAGTGTGTTGGGATACGTTTTACCACACAGATAATATTCAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAAGTGTGTTGGGATACGTTTTACCACACAGATAATATTCAGAGG  100

seq1  GTTTCTTGCCAATACAATATGTTCATGATGATTAAGACTAGATATTTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTGCCAATACAATATGTTCATGATGATTAAGACTAGATATTTGTA  150

seq1  GATTTTACATATTGTATACATTCATAAGCTTTCTCTACAGTATGAATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTACATATTGTATACATTCATAAGCTTTCTCTACAGTATGAATTCT  200

seq1  TTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGCTTTTGAAGATGCCTGTGACATACACAGGCTTTCACACATAGAT  250

seq1  CACATTCATTGTGTTTCTATCCAGTATGTATTCTTTTATGTCTTTGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATTGTGTTTCTATCCAGTATGTATTCTTTTATGTCTTTGGAGG  300

seq1  CTATAGTGTTGTAAAAAGGCTTTCTCACATTTATTACATTTAAAGGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGTGTTGTAAAAAGGCTTTCTCACATTTATTACATTTAAAGGATTT  350

seq1  CTCTCCATTATGAATTCTTCTATGCGACTGGAGGTTACTATGTTGTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCATTATGAATTCTTCTATGCGACTGGAGGTTACTATGTTGTGAAA  400

seq1  AGGCTTTCTCACATTTATTACATCTGTAGGGTTTCTCTCCAGTATGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTTCTCACATTTATTACATCTGTAGGGTTTCTCTCCAGTATGAATT  450

seq1  CTTCTATGTGACTGGAGATGACTATGTTGTGAAAAGGCTTTCTCACATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTATGTGACTGGAGATGACTATGTTGTGAAAAGGCTTTCTCACATGT  500

seq1  ATTACATTTGTAGGGTTTCTCTCCAGTATGAATTCGTCTATGTGACTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACATTTGTAGGGTTTCTCTCCAGTATGAATTCGTCTATGTGACTGGA  550

seq1  GGTTACCAAG  560
      ||||||||||
seq2  GGTTACCAAG  560