BAC Information

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BAC

Clone NameB6Ng01-032E07
Chromosome13 (Build37)
Map Location 94,591,067 - 94,727,307
singlet/doubletdoublet
Overlap geneArsb
Upstream geneEG624619, EG218444, Papd4, LOC100039163, Homer1, Jmy, EG619883, Bhmt, Bhmt2, Dmgdh
Downstream geneCycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1, Tbca, Otp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E07.bB6Ng01-032E07.g
ACCDH861655DH861656
length972745
definitionDH861655|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E07, 5' end.DH861656|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,591,067 - 94,592,038)(94,726,567 - 94,727,307)
sequence
gaattcatctaaaacacctggaagggaacctggcagaagtaggaatttca
caaatgaggctgtgatgactgtctgcactttctaggctttggcctttttg
cctggtcagagggaacactgaagcagtagcctctgggtggggcatcttag
tgcagaatactgcgtgtgcgttccgaaggtccgggttgaaggaatctagc
tgtcccatggacagagaccagcgtcccctgggggagtggttgataaggtc
tgtccagacttcagaaactcattttcaggtcaatgaacaacttatttaga
cactgtagtaaggaaaaggtttttctgtaagagagacagaagggaaaatt
gtagactctatgagtgcttgtggtactcagagctgaacctctgtgctgaa
gtcctcagactcggcagctatgcatggcttgaacagacagaagccctgat
taccagcattacattaaaatactacagaggttcttaaaactattcaatac
ttgctttctggctttaatccttcctcagaacgttaagtcatagttgtcca
tttctcacatggaaaaaaaaaagtggccttgggagatggcaccatccacc
tgaaatcaaccccctcacattctctgcagacacagaacacacccatcctc
acgacattccatttcccattgtcttttgagtatcaagaaacccagtgtta
ttgggactccaaagccagatgtggttgtcactaactattccaggtggcac
agtgccacttgattcaaaacaattgcatccagcagtcccaggctttcgtt
tgtagctctgagtttcttggaggcaccaatatggcaggtgcctccaggtg
tcactgggtttccttaagttcctctcttgctgcagctgcttccccctggg
catccaagacctgtccctggatctacgtgcctctgacactggaagacttc
atgcaccaccttagatgtgcag
gaattccagtcatcaggcttggcaccaagtttggatttcctaaattgtga
gctaagcaacatttttctttacaaagtacatggtctcgtgtattttgtta
tagcaacagaaaatgtgctctgaccagcttctttgggaagatatcttctg
ggaagaaaggaacagattagtacctcaacattgttgtagaaaggtgttta
ctccctgccacagctgatctacttgttctattgactctgaggtcaacgca
ggagtcccggattgctccactttctggttgttctctaggaatgatgacct
agcctggtgtatgcgctgcaaagtgcttgcagaagcagccaagggcaaga
aggcaagaggccatcgaatgttagtactctgggcgcaccaggggaagcct
gaggaggcttagctctctctagccagttctcatatcatgaagccaatggc
aaacaaaaagaatctgctgggttgaacgctaaaatgagtggaacgtgaaa
gaaaggatcggagagagttcaggacggtttcctggagtcaatgttctgtg
tggtcaggacagtttctctgagcatgagcagggtccacattcacacttta
tggacttcttggtgcgtgatgactctggcttaagttcatatactatatcc
agacacacagctgtttcatctgcctcagtcacctctggggctcaagaaga
tccaacattgaaagaaaagattttattttgtttttttaaatttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_94591067_94592038
seq2: B6Ng01-032E07.b_45_1016

seq1  GAATTCATCTAAAACACCTGGAAGGGAACCTGGCAGAAGTAGGAATTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAAAACACCTGGAAGGGAACCTGGCAGAAGTAGGAATTTCA  50

seq1  CAAATGAGGCTGTGATGACTGTCTGCACTTTCTAGGCTTTGGCCTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGAGGCTGTGATGACTGTCTGCACTTTCTAGGCTTTGGCCTTTTTG  100

seq1  CCTGGTCAGAGGGAACACTGAAGCAGTAGCCTCTGGGTGGGGCATCTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTCAGAGGGAACACTGAAGCAGTAGCCTCTGGGTGGGGCATCTTAG  150

seq1  TGCAGAATACTGCGTGTGCGTTCCGAAGGTCCGGGTTGAAGGAATCTAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAATACTGCGTGTGCGTTCCGAAGGTCCGGGTTGAAGGAATCTAGC  200

seq1  TGTCCCATGGACAGAGACCAGCGTCCCCTGGGGGAGTGGTTGATAAGGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATGGACAGAGACCAGCGTCCCCTGGGGGAGTGGTTGATAAGGTC  250

seq1  TGTCCAGACTTCAGAAACTCATTTTCAGGTCAATGAACAACTTATTTAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGACTTCAGAAACTCATTTTCAGGTCAATGAACAACTTATTTAGA  300

seq1  CACTGTAGTAAGGAAAAGGTTTTTCTGTAAGAGAGACAGAAGGGAAAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAGTAAGGAAAAGGTTTTTCTGTAAGAGAGACAGAAGGGAAAATT  350

seq1  GTAGACTCTATGAGTGCTTGTGGTACTCAGAGCTGAACCTCTGTGCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTCTATGAGTGCTTGTGGTACTCAGAGCTGAACCTCTGTGCTGAA  400

seq1  GTCCTCAGACTCGGCAGCTATGCATGGCTTGAACAGACAGAAGCCCTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGACTCGGCAGCTATGCATGGCTTGAACAGACAGAAGCCCTGAT  450

seq1  TACCAGCATTACATTAAAATACTACAGAGGTTCTTAAAACTATTCAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCATTACATTAAAATACTACAGAGGTTCTTAAAACTATTCAATAC  500

seq1  TTGCTTTCTGGCTTTAATCCTTCCTCAGAACGTTAAGTCATAGTTGTCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCTGGCTTTAATCCTTCCTCAGAACGTTAAGTCATAGTTGTCCA  550

seq1  TTTCTCACATGGAAAAAAAAAAGTGGCCTTGGGAGATGGCACCATCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCACATGGAAAAAAAAAAGTGGCCTTGGGAGATGGCACCATCCACC  600

seq1  TGAAATCAACCCCCTCACATTCTCTGCAGACACAGAACACACCCATCCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATCAACCCCCTCACATTCTCTGCAGACACAGAACACACCCATCCTC  650

seq1  ACGACATTCCATTTCCCATTGTCTTTTGAGTATCAAGAAACCCAGTGTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACATTCCATTTCCCATTGTCTTTTGAGTATCAAGAAACCCAGTGTTA  700

seq1  TTGGGACTCCAAAGCCAGATGTGGTTGTCACTAACTATTCCAGGTGGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGACTCCAAAGCCAGATGTGGTTGTCACTAACTATTCCAGGTGGCAC  750

seq1  AGTGCCACTTGATTCAAAACAATTGCATCCAGCAGTCCCAGGCTTTCGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACTTGATTCAAAACAATTGCATCCAGCAGTCCCAGGCTTTCGTT  800

seq1  TGTAGCTCTGAGTATCTTGGAGGCACCAATATGGCAGGTGCCTCCAGGTG  850
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTCTGAGTTTCTTGGAGGCACCAATATGGCAGGTGCCTCCAGGTG  850

seq1  TCACTGGG-TTCCTTAAGTTCCTCTCTTGCTGCAGCTGCTTCCCCCTGGG  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGGTTTCCTTAAGTTCCTCTCTTGCTGCAGCTGCTTCCCCCTGGG  900

seq1  CATCCAAGACCTGTCCCTGGATCTACGTGTCCTCTGACACTGGAGGACTT  949
      ||||||||||||||||||||||||||||| |||||||||||||| |||||
seq2  CATCCAAGACCTGTCCCTGGATCTACGTG-CCTCTGACACTGGAAGACTT  949

seq1  ACATGCACCACC-TAGATGTGCAG  972
       ||||||||||| |||||||||||
seq2  -CATGCACCACCTTAGATGTGCAG  972

seq1: chr13_94726567_94727307
seq2: B6Ng01-032E07.g_71_815 (reverse)

seq1  ATAAATTT-AAAAAACAAA--TAAATCTTTTCTTTCAATGTTGGATCTTC  47
      |||||||| ||||||||||   ||||||||||||||||||||||||||||
seq2  ATAAATTTAAAAAAACAAAATAAAATCTTTTCTTTCAATGTTGGATCTTC  50

seq1  TTGAG-CCCAGAGGTGACTGAGGCAGATGAAACAGCTGTGTGTCTGGATA  96
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCCCCAGAGGTGACTGAGGCAGATGAAACAGCTGTGTGTCTGGATA  100

seq1  TAGTATATGAACTTAAGCCAGAGTCATCACGCACCAAGAAGTCCATAAAG  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATATGAACTTAAGCCAGAGTCATCACGCACCAAGAAGTCCATAAAG  150

seq1  TGTGAATGTGGACCCTGCTCATGCTCAGAGAAACTGTCCTGACCACACAG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAATGTGGACCCTGCTCATGCTCAGAGAAACTGTCCTGACCACACAG  200

seq1  AACATTGACTCCAGGAAACCGTCCTGAACTCTCTCCGATCCTTTCTTTCA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTGACTCCAGGAAACCGTCCTGAACTCTCTCCGATCCTTTCTTTCA  250

seq1  CGTTCCACTCATTTTAGCGTTCAACCCAGCAGATTCTTTTTGTTTGCCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCACTCATTTTAGCGTTCAACCCAGCAGATTCTTTTTGTTTGCCAT  300

seq1  TGGCTTCATGATATGAGAACTGGCTAGAGAGAGCTAAGCCTCCTCAGGCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTCATGATATGAGAACTGGCTAGAGAGAGCTAAGCCTCCTCAGGCT  350

seq1  TCCCCTGGTGCGCCCAGAGTACTAACATTCGATGGCCTCTTGCCTTCTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTGGTGCGCCCAGAGTACTAACATTCGATGGCCTCTTGCCTTCTTG  400

seq1  CCCTTGGCTGCTTCTGCAAGCACTTTGCAGCGCATACACCAGGCTAGGTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCTGCTTCTGCAAGCACTTTGCAGCGCATACACCAGGCTAGGTC  450

seq1  ATCATTCCTAGAGAACAACCAGAAAGTGGAGCAATCCGGGACTCCTGCGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTCCTAGAGAACAACCAGAAAGTGGAGCAATCCGGGACTCCTGCGT  500

seq1  TGACCTCAGAGTCAATAGAACAAGTAGATCAGCTGTGGCAGGGAGTAAAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCAGAGTCAATAGAACAAGTAGATCAGCTGTGGCAGGGAGTAAAC  550

seq1  ACCTTTCTACAACAATGTTGAGGTACTAATCTGTTCCTTTCTTCCCAGAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCTACAACAATGTTGAGGTACTAATCTGTTCCTTTCTTCCCAGAA  600

seq1  GATATCTTCCCAAAGAAGCTGGTCAGAGCACATTTTCTGTTGCTATAACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTCCCAAAGAAGCTGGTCAGAGCACATTTTCTGTTGCTATAACA  650

seq1  AAATACACGAGACCATGTACTTTGTAAAGAAAAATGTTGCTTAGCTCACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACACGAGACCATGTACTTTGTAAAGAAAAATGTTGCTTAGCTCACA  700

seq1  ATTTAGGAAATCCAAACTTGGTGCCAAGCCTGATGACTGGAATTC  741
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGAAATCCAAACTTGGTGCCAAGCCTGATGACTGGAATTC  745