BAC Information

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BAC

Clone NameB6Ng01-035G01
Chromosome13 (Build37)
Map Location 103,686,329 - 103,808,979
singlet/doubletdoublet
Overlap geneMast4
Upstream geneCd180
Downstream geneEG621312, EG432800, LOC432801, LOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip, LOC100040086, D130037M23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035G01.bB6Ng01-035G01.g
ACCDH863861DH863862
length554688
definitionDH863861|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G01, 5' end.DH863862|Mus musculus domesticus DNA, BAC clone: B6Ng01-035G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,808,420 - 103,808,979)(103,686,329 - 103,687,014)
sequence
agggagagagaatcaccttggttttgcaatagatttgaaaaagatttgtg
agatctccagcaagacgaaggcaacgtttctggaaagagaagaaagaggt
tttaattcaagcaaaataaaaggcatgcaaaccatatttggctatgtttt
aaaacaaatttattttctctatagcaccctctaccctccctctcgcataa
atattgaagcaagaatttagaatatctactgtcaaagccaaatagaaggc
cagtgtcatgttgaatgttagaaatccaaaaacaaaatgaagggtgaaaa
aaaaaaagaaaaaatcgagtgttgcgtctgaattagcatttaaagtggca
tgtttatataaagagagagcgagtggtgtaatatatcccagagtaaagag
agggatgtgggcttggagaatgtcagctacatttatatattcatggagta
gccagcgtggcatttggctttccttctcaggcgtgagtttgtctgccctg
cagtgatgggagaggagggtgggaaaacaaaacagtggggtggggatggg
gtgg
gaattctctgtttatgtggacgggcactggggtgaaagatagtaggtaaa
taactttgatccttatacgcaaaaatcagactgactccatctaccattaa
gtaaggtgcttgatgtttgattcaggtagcctatttggaaaatgcttttg
atctttgcatccaaagtctagagtttagccaagtaaaaggaatacttttt
acaggaattctttctccaggtccaagatcaacaagtccttaaactcagac
ttgggaaagaacattacataatagccacttaatggctattgttttacagt
acaaagggttcatttggcatttcctagagagctttattcaggtggtagct
tttcccatgacagacatactctcttaatcccagccctccatgaatctata
aaagaaaacatttaataactgtaatttccaaggtagagacatctagcatg
ctgcattccacaagacacacatgttgtatgtgaatggggaatatacgttg
ttttttttgtttttttgttttttgttgtttttttaggtaagctacaggtg
ctgtgacttccttcagatttaacagcccaataagcttggcagtgtgtagg
taatcctccaaggggggactctttaaggaggtggcatagtcaatcctgaa
acataacttgtgctgtaatatttaaaataagaacaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103808420_103808979
seq2: B6Ng01-035G01.b_43_602 (reverse)

seq1  CCACCCCATCCCCACCCCACTGTTTTGTTTTCCCACCCTCCTCTCCCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCATCCCCACCCCACTGTTTTGTTTTCCCACCCTCCTCTCCCATC  50

seq1  ACTGCAGGGCAGACAAACTCACGCCTGAGAAGGAAAGCCAAATGCCACGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGGGCAGACAAACTCACGCCTGAGAAGGAAAGCCAAATGCCACGC  100

seq1  TGGCTACTCCATGAATATATAAATGTAGCTGACATTCTCCAAGCCCACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTCCATGAATATATAAATGTAGCTGACATTCTCCAAGCCCACAT  150

seq1  CCCTCTCTTTACTCTGGGATATATTACACCACTCGCTCTCTCTTTATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTCTTTACTCTGGGATATATTACACCACTCGCTCTCTCTTTATATA  200

seq1  AACATGCCACTTTAAATGCTAATTCAGACGCAACACTCGATTTTTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGCCACTTTAAATGCTAATTCAGACGCAACACTCGATTTTTTCTTT  250

seq1  TTTTTTTTCACCCTTCATTTTGTTTTTGGATTTCTAACATTCAACATGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCACCCTTCATTTTGTTTTTGGATTTCTAACATTCAACATGAC  300

seq1  ACTGGCCTTCTATTTGGCTTTGACAGTAGATATTCTAAATTCTTGCTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCTTCTATTTGGCTTTGACAGTAGATATTCTAAATTCTTGCTTCA  350

seq1  ATATTTATGCGAGAGGGAGGGTAGAGGGTGCTATAGAGAAAATAAATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATGCGAGAGGGAGGGTAGAGGGTGCTATAGAGAAAATAAATTTG  400

seq1  TTTTAAAACATAGCCAAATATGGTTTGCATGCCTTTTATTTTGCTTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAACATAGCCAAATATGGTTTGCATGCCTTTTATTTTGCTTGAAT  450

seq1  TAAAACCTCTTTCTTCTCTTTCCAGAAACGTTGCCTTCGTCTTGCTGGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCTCTTTCTTCTCTTTCCAGAAACGTTGCCTTCGTCTTGCTGGAG  500

seq1  ATCTCACAAATCTTTTTCAAATCTATTGCAAAACCAAGGTGATTCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCACAAATCTTTTTCAAATCTATTGCAAAACCAAGGTGATTCTCTCT  550

seq1  CCCTGAATTC  560
      ||||||||||
seq2  CCCTGAATTC  560

seq1: chr13_103686329_103687014
seq2: B6Ng01-035G01.g_68_755

seq1  GAATTCTCTGTTTATGTGGACGGGCACTGGGGTGAAAGATAGTAGGTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTTATGTGGACGGGCACTGGGGTGAAAGATAGTAGGTAAA  50

seq1  TAACTTTGATCCTTATACGCAAAAATCAGACTGACTCCATCTACCATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTGATCCTTATACGCAAAAATCAGACTGACTCCATCTACCATTAA  100

seq1  GTAAGGTGCTTGATGTTTGATTCAGGTAGCCTATTTGGAAAATGCTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGGTGCTTGATGTTTGATTCAGGTAGCCTATTTGGAAAATGCTTTTG  150

seq1  ATCTTTGCATCCAAAGTCTAGAGTTTAGCCAAGTAAAAGGAATACTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGCATCCAAAGTCTAGAGTTTAGCCAAGTAAAAGGAATACTTTTT  200

seq1  ACAGGAATTCTTTCTCCAGGTCCAAGATCAACAAGTCCTTAAACTCAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATTCTTTCTCCAGGTCCAAGATCAACAAGTCCTTAAACTCAGAC  250

seq1  TTGGGAAAGAACATTACATAATAGCCACTTAATGGCTATTGTTTTACAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGAAAGAACATTACATAATAGCCACTTAATGGCTATTGTTTTACAGT  300

seq1  ACAAAGGGTTCATTTGGCATTTCCTAGAGAGCTTTATTCAGGTGGTAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGGGTTCATTTGGCATTTCCTAGAGAGCTTTATTCAGGTGGTAGCT  350

seq1  TTTCCCATGACAGACATACTCTCTTAATCCCAGCCCTCCATGAATCTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCATGACAGACATACTCTCTTAATCCCAGCCCTCCATGAATCTATA  400

seq1  AAAGAAAACATTTAATAACTGTAATTTCCAAGGTAGAGACATCTAGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAACATTTAATAACTGTAATTTCCAAGGTAGAGACATCTAGCATG  450

seq1  CTGCATTCCACAAGACACACATGTTGTATGTGAATGGGGAATATACGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTCCACAAGACACACATGTTGTATGTGAATGGGGAATATACGTTG  500

seq1  TTTTTTTTGTTTTTTTGTTTTTTGTTGTTTTTTTAGGTAAGCTACAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTGTTTTTTTGTTTTTTGTTGTTTTTTTAGGTAAGCTACAGGTG  550

seq1  CTGTGACTTCCTTCAGATTTAACAG-CCAAGAAGCTTGGCAGTGTGTAGG  599
      ||||||||||||||||||||||||| |||| |||||||||||||||||||
seq2  CTGTGACTTCCTTCAGATTTAACAGCCCAATAAGCTTGGCAGTGTGTAGG  600

seq1  TAATCCTCCAA-GGGTGACTC-TTAAGGAGGTGGCATAGTCAATCCTGAG  647
      ||||||||||| ||| ||||| ||||||||||||||||||||||||||| 
seq2  TAATCCTCCAAGGGGGGACTCTTTAAGGAGGTGGCATAGTCAATCCTGAA  650

seq1  ACATAAACTTGTGCTGTAATATTTAAAATTAGAACAAAC  686
      |||| |||||||||||||||||||||||| |||||||||
seq2  ACAT-AACTTGTGCTGTAATATTTAAAATAAGAACAAAC  688