BAC Information

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BAC

Clone NameB6Ng01-035J16
Chromosome13 (Build37)
Map Location 95,566,049 - 95,567,087
singlet/doubletsinglet
Overlap geneTbca
Upstream geneArsb, Cycs-ps3, Lhfpl2, Scamp1, LOC435378, ENSMUSG00000042857, Ap3b1
Downstream geneOtp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z, F2rl1, F2r, Iqgap2, F2rl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035J16.bB6Ng01-035J16.g
ACCDH864025DH864026
length1,0161,120
definitionDH864025|Mus musculus domesticus DNA, BAC clone: B6Ng01-035J16, 5' end.DH864026|Mus musculus domesticus DNA, BAC clone: B6Ng01-035J16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctagttgttgagagacctgtgccaaagaagtattttatggctc
tcttaatgtgcatctatgtgttcttgttttaacctggcccattacaaacc
tttgtaaaggatagtgaagcaaatagcattagtgtaacggtgaatgttct
ccgtctctaaataatactgctatacgttagtgaagttagtctctgaaata
accatactgtaccgttctctataaaacctatgaagccgataagtccactg
aagtgcatttaaacttaatacagtagtataattttgatatctaagtcaaa
tcctaagggttctgcattatgttaaaaatatatgaagatttttttaaggc
tgagaagttctttacagtagtcaaagagataatgtttaatggctttcata
aaatatgtatgttacttgccagctcggttgagaagtggtagagactagga
aaagttcatgtgacagggttccagtgcaacagtctagagctatttacttt
ataactaaaagcgagaggcttagaaatggagactaagagagaaacagtgg
ctgtaaccaacagctttcaatacggttcttcaagatggcatgatagtaaa
cataccatatcaggggtgtacttaaaaactaaaaactttaagcactgttt
taatgttataaatgctaatctgttgtcttggttaggattttactcctgtg
aacagacaccatgaccaaggcaactcttataaaggacaacatttaattgg
ggctggcttacaggttcagaggttcaatccattatcatcaaggtggtaac
atggcagcgtccaggcagcatggcgcagagagctgagagctctacatctt
catctgaagctgctaggagaagactggtttccaggcagctagatgaggtc
ttaaagccatgccacagtgactcactactcaccggccacatctctaatat
gcaccctgagcagctatacacacatcacatgttaaagaaaatttttgtta
tttttagaacagtttt
gaattctcatctgaggaataccgaatggctgagaagcacctgaaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctctcaacagtcagaatggctaagatcaggtgacagcagatgct
ggtgaggatgtggagaaagaggaacactcctccattgttggtgggattgc
aagcttgtacaaccactctggaaatcagtctggcagttcctcagaaaatt
ggacatggtactatcggaggatcccacagtacctctcctggccatatatc
cagaagatgttccaactagtaagaaagatacatgctccactatgttcata
gcagccttatttataatagccagaagctggaaagaacccagatgcccctc
aacagaggaatggatacaaaaaatgtggtacatttacacaatggagtact
actcagctattaaaaagaatgaatttatgaaattcctaggcaaatggatg
gatctggagggcattatcctgagtgaagtaactcaatcacaaaagaactc
aaatgatatgtactcactgataagtggatcttagcctagaaacttagaat
acccaagatataagttacaatttgcaaaacacatgaaactcaagaacaat
gaagaccaaagtgtggacactttgccccttcttagaattgggaacaaaat
acccatggaaggagttacagagacacagtttggagctgagacgaaaggat
ggaccatctagagactgccatatccagggatccatcccaaatcagcctcc
aaacgctgacaccatttcatacactagcagattttgctgaaaggacccag
atagagctgtctcttgtgtgactatgccagggcctagcaacacagaagtg
atgctcaggtcagctatggatgagccagggccccatggagagctagagaa
gtaccagagctaaggatctgcacctatagtgatcacatatgactaccagt
accccagcttctgcttagctgcatagaacaaaaatgcctatcgcctctgg
aaagaagcccttgtcggcaacttattctttctactcagggaagccggcca
aaatgaatgatgtggtgaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_95566049_95567087
seq2: B6Ng01-035J16.b_46_1061

seq1  GAATTCTCTAGTTGTTGAGAGACCTGTGCCAAAGAAGTATTTTATGGCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGTTGTTGAGAGACCTGTGCCAAAGAAGTATTTTATGGCTC  50

seq1  TCTTAATGTGCATCTATGTGTTCTTGTTTTAACCTGGCCCATTACAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATGTGCATCTATGTGTTCTTGTTTTAACCTGGCCCATTACAAACC  100

seq1  TTTGTAAAGGATAGTGAAGCAAATAGCATTAGTGTAACGGTGAATGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAAAGGATAGTGAAGCAAATAGCATTAGTGTAACGGTGAATGTTCT  150

seq1  CCGTCTCTAAATAATACTGCTATACGTTAGTGAAGTTAGTCTCTGAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTCTAAATAATACTGCTATACGTTAGTGAAGTTAGTCTCTGAAATA  200

seq1  ACCATACTGTACCGTTCTCTATAAAACCTATGAAGCCGATAAGTCCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATACTGTACCGTTCTCTATAAAACCTATGAAGCCGATAAGTCCACTG  250

seq1  AAGTGCATTTAAACTTAATACAGTAGTATAATTTTGATATCTAAGTCAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGCATTTAAACTTAATACAGTAGTATAATTTTGATATCTAAGTCAAA  300

seq1  TCCTAAGGGTTCTGCATTATGTTAAAAATATATGAAGATTTTTTTAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGGGTTCTGCATTATGTTAAAAATATATGAAGATTTTTTTAAGGC  350

seq1  TGAGAAGTTCTTTACAGTAGTCAAAGAGATAATGTTTAATGGCTTTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAAGTTCTTTACAGTAGTCAAAGAGATAATGTTTAATGGCTTTCATA  400

seq1  AAATATGTATGTTACTTGCCAGCTCGGTTGAGAAGTGGTAGAGACTAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGTATGTTACTTGCCAGCTCGGTTGAGAAGTGGTAGAGACTAGGA  450

seq1  AAAGTTCATGTGACAGGGTTCCAGTGCAACAGTCTAGAGCTATTTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTCATGTGACAGGGTTCCAGTGCAACAGTCTAGAGCTATTTACTTT  500

seq1  ATAACTAAAAGCGAGAGGCTTAGAAATGGAGACTAAGAGAGAAACAGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAAAAGCGAGAGGCTTAGAAATGGAGACTAAGAGAGAAACAGTGG  550

seq1  CTGTAACCAACAGCTTTCAATACGGTTCTTCAAGATGGCATGATAGTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACCAACAGCTTTCAATACGGTTCTTCAAGATGGCATGATAGTAAA  600

seq1  CATACCATATCAGGGGTGTACTTAAAAACTAAAAACTTTAAGCACTGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCATATCAGGGGTGTACTTAAAAACTAAAAACTTTAAGCACTGTTT  650

seq1  TAATGTTATAAATGCTAATCTGTTGTCTTGGTTAGGATTTTACTCCTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTATAAATGCTAATCTGTTGTCTTGGTTAGGATTTTACTCCTGTG  700

seq1  AACAGACACCATGACCAAGGCAACTCTTATAAAGGACAACATTTAATTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACACCATGACCAAGGCAACTCTTATAAAGGACAACATTTAATTGG  750

seq1  GGCTGGCTTACAGGTTCAGAGGTTCAATCCATTATCATCAAGGTGGTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTTACAGGTTCAGAGGTTCAATCCATTATCATCAAGGTGGTAAC  800

seq1  ATGGCAGCGTCCAGGCAGGCATGGCGCAGGAGGAGCTGAGAGCTCTACAT  850
      ||||||||||||||||| |||||||||||   ||||||||||||||||||
seq2  ATGGCAGCGTCCAGGCA-GCATGGCGCAG--AGAGCTGAGAGCTCTACAT  847

seq1  CTTCATCTGAAGGCTGCTAGGAGAAGACTGGTTTCCAGGCAGCTAGGATG  900
      ||||||||||| ||||||||||||||||||||||||||||||||| ||||
seq2  CTTCATCTGAA-GCTGCTAGGAGAAGACTGGTTTCCAGGCAGCTA-GATG  895

seq1  AGGGTCTTAAAGCCCATGCCACAGTGACTCAACTACTCCAACCGGGCCAC  950
      | |||||||||| ||||||||||||||||| |||||||  ||| ||||||
seq2  A-GGTCTTAAAG-CCATGCCACAGTGACTC-ACTACTC--ACC-GGCCAC  939

seq1  ATCTCCTAATAGTGCCACCCCTGAGCCAAGCATATACACACCATCACATG  1000
      |||| |||||| |||   ||||||||  ||| |||||||| |||||||||
seq2  ATCT-CTAATA-TGC--ACCCTGAGC--AGC-TATACACA-CATCACATG  981

seq1  TTATAGAAAAATTTATGTTATTTTTAAGAAAACAGTTTT  1039
      ||| || ||||||| ||||||||||   | |||||||||
seq2  TTAAAG-AAAATTTTTGTTATTTTT---AGAACAGTTTT  1016