BAC Information

Click to search

BAC

Clone NameB6Ng01-035O14
Chromosome13 (Build37)
Map Location 12,479,622 - 12,591,345
singlet/doubletdoublet
Overlap geneHeatr1, LOC546246, Lgals8, LOC100039900, Edaradd
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725
Downstream geneEro1lb, LOC664862, EG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035O14.bB6Ng01-035O14.g
ACCDH864254DH864255
length468855
definitionDH864254|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O14, 5' end.DH864255|Mus musculus domesticus DNA, BAC clone: B6Ng01-035O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,590,872 - 12,591,345)(12,479,622 - 12,480,485)
sequence
tcgcccttaggaatatgcatttaatcatctctgtctcttgatggttcata
ttccattgctttctttgtgtgtgtgtgctgtgtatgtgtgtgtgtattca
cgcgtgcgcgtgtgctgtgtaatattccagtatctggataaaccattaat
tatctatttacctactaaaggatatcatggttggaagaagtgaatcattt
tgctccattttaagtatggggtgtgtttagagcttgtcaaagagtcatag
atacataggaggcactaggcccttgcttcctctagctggccactggtacc
agcttgcccagatgatggcagcttatcctgggttgaaaggttacagggat
cctggtacatggctgagccataatcaaaaaaggaaggaatttcaaccctc
ggggtatatattagataaacctttgcatccagaaccgataggatgggaaa
ttggggtagggtgggggg
gaattcctgaccccctgcctccaccttcaagatgctgggattactggcaa
gtgtcactgtgtccagctaatcccatttcttttttcaacaaaagataaac
ttgggtgggtaatcaagtgtcggaggccaagcctgacagccttccttctg
tgtccttggcacttgcaaacactgtcgagagagtgttcacacatccacac
ccacacatacacccatacagacatacagacatacacccacccacccccag
acacacacatataatttccccctacaaacatatactcactcacacacaca
cacacacacacacacacacacacacacacacacacacactcacaaacata
cacacatatacatacatacatgctgggtggtggtggcacacgcctttaat
cccagcacttgggaggcagaggcaggtggacttctgagctcgaggccagc
ctggtatacagagtgagttccaggacatccaggaatacatagagaaaccc
tatcttgaaaacaaaaaacaaaacaaaacaaagcaaagcaaaacaaaaca
aaaaagcaataataaatcaaaccaaaaaaatcaacatacatacacacaca
tacacacagatgaacacacatgcagtcacacacatatacataaataaaag
ttaaaaataactgggtatgtgtttcagggtttggaaacagcttttctcct
gtgtcctcacaattagaagacaggctagatgttcctagggtagtgctttt
cagtcatggcgtcaagcttcaggaggccctttataagaagctctagtgag
aagaaggactggggactagtcacccttctttcataacagattcagcatag
tcaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12590872_12591345
seq2: B6Ng01-035O14.b_48_521 (reverse)

seq1  CCCCCCACCCTACCCCAATTTCCCATCCTATCGGTTCTGGATGCAAAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACCCTACCCCAATTTCCCATCCTATCGGTTCTGGATGCAAAGGT  50

seq1  TTATCTAATATATACCCCGAGGGTTGAAATTCCTTCCTTTTTTGATTATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTAATATATACCCCGAGGGTTGAAATTCCTTCCTTTTTTGATTATG  100

seq1  GCTCAGCCATGTACCAGGATCCCTGTAACCTTTCAACCCAGGATAAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGCCATGTACCAGGATCCCTGTAACCTTTCAACCCAGGATAAGCTG  150

seq1  CCATCATCTGGGCAAGCTGGTACCAGTGGCCAGCTAGAGGAAGCAAGGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATCTGGGCAAGCTGGTACCAGTGGCCAGCTAGAGGAAGCAAGGGC  200

seq1  CTAGTGCCTCCTATGTATCTATGACTCTTTGACAAGCTCTAAACACACCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGCCTCCTATGTATCTATGACTCTTTGACAAGCTCTAAACACACCC  250

seq1  CATACTTAAAATGGAGCAAAATGATTCACTTCTTCCAACCATGATATCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACTTAAAATGGAGCAAAATGATTCACTTCTTCCAACCATGATATCCT  300

seq1  TTAGTAGGTAAATAGATAATTAATGGTTTATCCAGATACTGGAATATTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAGGTAAATAGATAATTAATGGTTTATCCAGATACTGGAATATTAC  350

seq1  ACAGCACACGCGCACGCGTGAATACACACACACATACACAGCACACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACACGCGCACGCGTGAATACACACACACATACACAGCACACACAC  400

seq1  ACAAAGAAAGCAATGGAATATGAACCATCAAGAGACAGAGATGATTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAAAGCAATGGAATATGAACCATCAAGAGACAGAGATGATTAAAT  450

seq1  GCATATTCCTAAGGGCGAGAATTC  474
      ||||||||||||||||||||||||
seq2  GCATATTCCTAAGGGCGAGAATTC  474

seq1: chr13_12479622_12480485
seq2: B6Ng01-035O14.g_70_924

seq1  GAATTCCTGACCCCCTGCCTCCACCTTCAAGATGCTGGGATTACTGGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACCCCCTGCCTCCACCTTCAAGATGCTGGGATTACTGGCAA  50

seq1  GTGTCACTGTGTCCAGCTAATCCCATTTCTTTTTTCAACAAAAGATAAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACTGTGTCCAGCTAATCCCATTTCTTTTTTCAACAAAAGATAAAC  100

seq1  TTGGGTGGGTAATCAAGTGTCGGAGGCCAAGCCTGACAGCCTTCCTTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGGTAATCAAGTGTCGGAGGCCAAGCCTGACAGCCTTCCTTCTG  150

seq1  TGTCCTTGGCACTTGCAAACACTGTCGAGAGAGTGTTCACACATCCACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGGCACTTGCAAACACTGTCGAGAGAGTGTTCACACATCCACAC  200

seq1  CCACACATACACCCATACAGACATACAGACATACACCCACCCACCCCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACATACACCCATACAGACATACAGACATACACCCACCCACCCCCAG  250

seq1  ACACACACATATAATTTCCCCCTACAAACATATACTCACTCACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATATAATTTCCCCCTACAAACATATACTCACTCACACACACA  300

seq1  CACACACACACACACACACACACACACACACACACACACTCACAAACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACTCACAAACATA  350

seq1  CACACATATACATACATACATGCTGGGTGGTGGTGGCACACGCCTTTAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATACATACATACATGCTGGGTGGTGGTGGCACACGCCTTTAAT  400

seq1  CCCAGCACTTGGGAGGCAGAGGCAGGTGGACTTCTGAGCTCGAGGCCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGGGAGGCAGAGGCAGGTGGACTTCTGAGCTCGAGGCCAGC  450

seq1  CTGGTATACAGAGTGAGTTCCAGGACATCCAGGAATACATAGAGAAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTATACAGAGTGAGTTCCAGGACATCCAGGAATACATAGAGAAACCC  500

seq1  TATCTTGAAAACAAAAAACAAAACAAAACAAAGCAAAGCAAAACAAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTGAAAACAAAAAACAAAACAAAACAAAGCAAAGCAAAACAAAACA  550

seq1  AAAAAGCAATAATAAATCAAACCAAAAAAATCAACATACATACACACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCAATAATAAATCAAACCAAAAAAATCAACATACATACACACACA  600

seq1  TACACACAGATGAACACACATGCAGTCACACACATATACATAAATAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACAGATGAACACACATGCAGTCACACACATATACATAAATAAAAG  650

seq1  TTTAAAAATAACTGGGTATGTGTTTCAGGGTTTTGGAAACAGCTCTTCTC  700
       ||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  -TTAAAAATAACTGGGTATGTGTTTCAGGG-TTTGGAAACAGCTTTTCTC  698

seq1  CTGTGTCCTCACAATTAGAAGACAGGCTAGATGTTCCTAGGGTAGTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCTCACAATTAGAAGACAGGCTAGATGTTCCTAGGGTAGTGCTT  748

seq1  TTCCAGTCATGGCGTCAGGCTTCAGGGAGGCCCTTAATAAGAAGCTCTTA  800
      || |||||||||||||| |||||| |||||||||| ||||||||||| ||
seq2  TT-CAGTCATGGCGTCAAGCTTCA-GGAGGCCCTTTATAAGAAGCTC-TA  795

seq1  GTGAGAAGAAAGGACTGGGGGACTAGTCACCCTTCCTTTCATAACAGATT  850
      |||||||| ||||||| ||||||||||||||||| |||||||||||||||
seq2  GTGAGAAG-AAGGACT-GGGGACTAGTCACCCTT-CTTTCATAACAGATT  842

seq1  CAGGCATAGTCAGA  864
      || |||||||||||
seq2  CA-GCATAGTCAGA  855