BAC Information

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BAC

Clone NameB6Ng01-036E05
Chromosome13 (Build37)
Map Location 12,567,709 - 12,726,605
singlet/doubletdoublet
Overlap geneEdaradd, Ero1lb, LOC664862
Upstream geneZp4, Ryr2, LOC100039678, Mtr, LOC100039826, Actn2, EG432725, Heatr1, LOC546246, Lgals8, LOC100039900
Downstream geneEG238507, LOC100039744, EG630757, Prl2c3, LOC100039999, LOC100039754, Prl2c2, LOC434483, LOC674723, Prl2c5, LOC630611, LOC100039786, LOC385049, LOC630663, LOC100040108, Gpr137b, LOC664960, Nid1, Lyst
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036E05.bB6Ng01-036E05.g
ACCDH864498DH864499
length9851,022
definitionDH864498|Mus musculus domesticus DNA, BAC clone: B6Ng01-036E05, 5' end.DH864499|Mus musculus domesticus DNA, BAC clone: B6Ng01-036E05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,725,607 - 12,726,605)(12,567,709 - 12,568,736)
sequence
gaattcattaacctcagttggctgaggtcttctctctctctctctctctc
tctctttatctgacttggtgcctgtgctgtcagaagccctgtaaactatt
attaatccacgtttgcctccccatctccccccagaagcttattctgctct
caactgagtccaaagtcagcaggagtcagcgcgggctcgtggagctggat
agcaggttaggagctcccgaggaccagcaggtcactgaggactgagttct
tagcactctttaatgaagtccatgcaggcagagtgagtacacggacaact
tagatttattgatattattttacgtttgtaaattgcaaacttacgtttga
atatgtatgtcttttaattagtgaggacaaagttgatgttcaaaaatata
tttatatgttttttgatacatataatatgttatctgtagaagttaggcct
ggctcttcctcccagccccatgctcccagaaatacgactcagactcaaaa
tatattttcaaatattttggtcaaatagctaggctcttctctgactagat
tataacttaaaatatcctatttattctaatctacatcctgccacatggct
ggttacctgtgctcaggtaccatgcgtttgtcttgtcaaatcttcctggg
ccaatctctcatgtggaattcccagaatcctttctgcctcctggatggct
caccttcttttctaccctttccataggccatagagtttttaattgacagg
cgaagcatccatacaacacacaagatcttctctccaaagttgtctatggg
aatatccatatatctcacatcatgttattcagtttcaattgtcagggatc
ggtataaacttgaggagctaaagtttaggatgaggaagagcaagcttgag
gagctggctgattcaaacagatgtactgcataacgtggagggtgggtgga
acttttgcctctgctgacgtgacctggctgtggct
gaattcagtgaacacttacaagcacagctgtgttctggagctgcatcctg
accagttgcgtagaggctgaagtactggcaacacttcctgtgaaacactt
cctgtgaaacacttacttcctgtgaaacacttcctgtgaaagcgatgggt
gaaaggattggctaccccaggccagtcatgagcagtactcactctggatg
tttgtaatgtacggaactcaagttctggcatacattggaaagctagggct
ggcatttcccaatgctccatcattcctctatctctgagcctcaccttctg
agttccttcctgcaaagtgatttccaaagcccctctcgtttccctacagt
cgcctctgctctaagaagtgagagctaaaccacgtgtggtggcccagcac
ttggaaggcagaagcaggcgatcggaaattctgggccatcctctgctaca
gaatgagagtgagagcaccttgggctaggagaccctgtgaaaaccagcca
gatcacgccatggagagcttaatgagaaagtaggcaaccaatcacatctg
cgcaatgtttagagctccccacaacatgcccacaggttctgctagaagcc
tagatcacgctcatgatgctcacaacatcctgactttcctgagaagctac
tttataaaatatctgcgtctaggggctagggagacgggctctgccgttgg
gtgcactaactgctccttgcagatgttgtcccagcacccacatggagatt
gatggacagacatttgcaactccagttctaggggatccgaggcctttcac
cactgcaagtaccatggccccagggaaaacattcatactatacattctaa
aacactaggacgtttgcattattcattcacctcccacttaatatatctgg
caataaaggggacgcctggttggaattaacagggaccaaaactgatgggc
aagtcctactgtagacttgttgattggagttccgctgggtggaagcttgc
cttacctacaaccgcctaaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_12725607_12726605
seq2: B6Ng01-036E05.b_46_1030 (reverse)

seq1  AGCCAACAGCCAGGGTCACGTCAAGACAGAGGCAAAAAGCTCCACCCACC  50
      |||| ||||||| ||||||||||   ||||||| ||||| ||||||||||
seq2  AGCC-ACAGCCA-GGTCACGTCA--GCAGAGGC-AAAAGTTCCACCCACC  45

seq1  CTCCACGTATGGCAGTTACATCTTGTCTGAATCCAGCCAGGCTCCTCAAG  100
      ||||||||   |||| |||||| ||| ||||| |||||| ||||||||||
seq2  CTCCACGTTATGCAG-TACATC-TGTTTGAAT-CAGCCA-GCTCCTCAAG  91

seq1  CTTTGCTCTTCCTTCATCCTTAAACTTTAGCTCCCTCAAGTTTATACCGA  150
      | |||||||||| |||||| |||||||||||| |||||||||||||||||
seq2  C-TTGCTCTTCC-TCATCC-TAAACTTTAGCT-CCTCAAGTTTATACCGA  137

seq1  TCCCTGACAATTGAAACTGAAATAACATGATGTGAGATATATGGATATT-  199
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  TCCCTGACAATTGAAACTG-AATAACATGATGTGAGATATATGGATATTC  186

seq1  CCATAGACAACTTTGGAGAGAAGATCTTGTGTGTTGTATGGATGCTTCGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGACAACTTTGGAGAGAAGATCTTGTGTGTTGTATGGATGCTTCGC  236

seq1  CTGTCAATTAAAAACTCTATGGCCTATTGGAAAGGGTAGAAAAGAAGGTG  299
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTGTCAATTAAAAACTCTATGGCCTA-TGGAAAGGGTAGAAAAGAAGGTG  285

seq1  AGCCATCCAGGAGGCAGAAAGGATTCTGGGAATTCCACATGAGAGATTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCCAGGAGGCAGAAAGGATTCTGGGAATTCCACATGAGAGATTGG  335

seq1  CCCAGGAAGATTTGACAAGACAAACGCATGGTACCTGAGCACAGGTAACC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAAGATTTGACAAGACAAACGCATGGTACCTGAGCACAGGTAACC  385

seq1  AGCCATGTGGCAGGATGTAGATTAGAATAAATAGGATATTTTAAGTTATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGTGGCAGGATGTAGATTAGAATAAATAGGATATTTTAAGTTATA  435

seq1  ATCTAGTCAGAGAAGAGCCTAGCTATTTGACCAAAATATTTGAAAATATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGTCAGAGAAGAGCCTAGCTATTTGACCAAAATATTTGAAAATATA  485

seq1  TTTTGAGTCTGAGTCGTATTTCTGGGAGCATGGGGCTGGGAGGAAGAGCC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTCTGAGTCGTATTTCTGGGAGCATGGGGCTGGGAGGAAGAGCC  535

seq1  AGGCCTAACTTCTACAGATAACATATTATATGTATCAAAAAACATATAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAACTTCTACAGATAACATATTATATGTATCAAAAAACATATAAA  585

seq1  TATATTTTTGAACATCAACTTTGTCCTCACTAATTAAAAGACATACATAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTGAACATCAACTTTGTCCTCACTAATTAAAAGACATACATAT  635

seq1  TCAAACGTAAGTTTGCAATTTACAAACGTAAAATAATATCAATAAATCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACGTAAGTTTGCAATTTACAAACGTAAAATAATATCAATAAATCTA  685

seq1  AGTTGTCCGTGTACTCACTCTGCCTGCATGGACTTCATTAAAGAGTGCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCGTGTACTCACTCTGCCTGCATGGACTTCATTAAAGAGTGCTA  735

seq1  AGAACTCAGTCCTCAGTGACCTGCTGGTCCTCGGGAGCTCCTAACCTGCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCAGTCCTCAGTGACCTGCTGGTCCTCGGGAGCTCCTAACCTGCT  785

seq1  ATCCAGCTCCACGAGCCCGCGCTGACTCCTGCTGACTTTGGACTCAGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTCCACGAGCCCGCGCTGACTCCTGCTGACTTTGGACTCAGTTG  835

seq1  AGAGCAGAATAAGCTTCTGGGGGGAGATGGGGAGGCAAACGTGGATTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAATAAGCTTCTGGGGGGAGATGGGGAGGCAAACGTGGATTAAT  885

seq1  AATAGTTTACAGGGCTTCTGACAGCACAGGCACCAAGTCAGATAAAGAGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTACAGGGCTTCTGACAGCACAGGCACCAAGTCAGATAAAGAGA  935

seq1  GAGAGAGAGAGAGAGAGAGAAGACCTCAGCCAACTGAGGTTAATGAATTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAAGACCTCAGCCAACTGAGGTTAATGAATTC  985

seq1: chr13_12567709_12568736
seq2: B6Ng01-036E05.g_67_1088

seq1  GAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGAACACTTACAAGCACAGCTGTGTTCTGGAGCTGCATCCTG  50

seq1  ACCAGTTGCGTAGAGGCTGAAGTACTGGCAACACTTCCTGTGAAACACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTGCGTAGAGGCTGAAGTACTGGCAACACTTCCTGTGAAACACTT  100

seq1  CCTGTGAAACACTTACTTCCTGTGAAACACTTCCTGTGAAAGCGATGGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGAAACACTTACTTCCTGTGAAACACTTCCTGTGAAAGCGATGGGT  150

seq1  GAAAGGATTGGCTACCCCAGGCCAGTCATGAGCAGTACTCACTCTGGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGATTGGCTACCCCAGGCCAGTCATGAGCAGTACTCACTCTGGATG  200

seq1  TTTGTAATGTACGGAACTCAAGTTCTGGCATACATTGGAAAGCTAGGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAATGTACGGAACTCAAGTTCTGGCATACATTGGAAAGCTAGGGCT  250

seq1  GGCATTTCCCAATGCTCCATCATTCCTCTATCTCTGAGCCTCACCTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTCCCAATGCTCCATCATTCCTCTATCTCTGAGCCTCACCTTCTG  300

seq1  AGTTCCTTCCTGCAAAGTGATTTCCAAAGCCCCTCTCGTTTCCCTACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCTTCCTGCAAAGTGATTTCCAAAGCCCCTCTCGTTTCCCTACAGT  350

seq1  CGCCTCTGCTCTAAGAAGTGAGAGCTAAACCACGTGTGGTGGCCCAGCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTCTGCTCTAAGAAGTGAGAGCTAAACCACGTGTGGTGGCCCAGCAC  400

seq1  TTGGAAGGCAGAAGCAGGCGATCGGAAATTCTGGGCCATCCTCTGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGCAGAAGCAGGCGATCGGAAATTCTGGGCCATCCTCTGCTACA  450

seq1  GAATGAGAGTGAGAGCACCTTGGGCTAGGAGACCCTGTGAAAACCAGCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAGTGAGAGCACCTTGGGCTAGGAGACCCTGTGAAAACCAGCCA  500

seq1  GATCACGCCATGGAGAGCTTAATGAGAAAGTAGGCAACCAATCACATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACGCCATGGAGAGCTTAATGAGAAAGTAGGCAACCAATCACATCTG  550

seq1  CGCAATGTTTAGAGCTCCCCACAACATGCCCACAGGTTCTGCTAGAAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATGTTTAGAGCTCCCCACAACATGCCCACAGGTTCTGCTAGAAGCC  600

seq1  TAGATCACGCTCATGATGCTCACAACAT-CTGACTTTCCTGAGAAGCTAC  649
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TAGATCACGCTCATGATGCTCACAACATCCTGACTTTCCTGAGAAGCTAC  650

seq1  TTATAAAAATATCTGCGTCTAGGGGCTAGGGAGACGGGCTCTGCCGTTGG  699
      ||   |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAATATCTGCGTCTAGGGGCTAGGGAGACGGGCTCTGCCGTTGG  700

seq1  GTGCACTAGCTGCT-CTTGCAGATGTGTTCCCAGCACCCACATGGAGATT  748
      |||||||| ||||| |||||||||||  ||||||||||||||||||||||
seq2  GTGCACTAACTGCTCCTTGCAGATGTTGTCCCAGCACCCACATGGAGATT  750

seq1  GATGGACAGACATTTGCAACTCCAGTTCTAGGGGATCCGACGCCTTTCAA  798
      |||||||||||||||||||||||||||||||||||||||| ||||||| |
seq2  GATGGACAGACATTTGCAACTCCAGTTCTAGGGGATCCGAGGCCTTTC-A  799

seq1  CCACTGCAGGTACCATGCACACAGGGAAAACATTCATACAAATACATCTA  848
      |||||||| ||||||||  | ||||||||||||||||||  |||||| | 
seq2  CCACTGCAAGTACCATGGCCCCAGGGAAAACATTCATAC-TATACAT-TC  847

seq1  AAAAACACTAGGACGTCTGCATTTAATCA-TCAGCTCCCACTTTAAATAT  897
       ||||||||||||||| |||| ||| ||| ||| |||||||||  |||||
seq2  TAAAACACTAGGACGTTTGCA-TTATTCATTCACCTCCCACTT--AATAT  894

seq1  ATCTGGCAATAAAGTGGACG-CTGG-TGTGATTAACAGTGAACCAGAACT  945
      |||||||||||||| ||||| |||| ||  |||||||| | |||| ||||
seq2  ATCTGGCAATAAAGGGGACGCCTGGTTGGAATTAACAG-GGACCAAAACT  943

seq1  GATGGGCAAGTCTCACTGTAGACGTTGTTGATTGGAGTTCACGCTGTGTG  995
      ||||||||||||  ||||||||| |||||||||||||||| ||||| || 
seq2  GATGGGCAAGTCCTACTGTAGAC-TTGTTGATTGGAGTTC-CGCTGGGT-  990

seq1  GGAAGCTGGCTTTACCTACCAACCGCCTAAGGG  1028
      ||||||| || ||||||| ||||||||||||||
seq2  GGAAGCTTGCCTTACCTA-CAACCGCCTAAGGG  1022