BAC Information

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BAC

Clone NameB6Ng01-037B22
Chromosome13 (Build37)13 (Build37)
Map Location 17,552,651 - 17,552,93213,532,247 - 13,533,326
singlet/doubletsingletsinglet
Overlap gene5033411D12Rik
Upstream geneLOC665191
Downstream gene2810021B07Rik, Cdc2l5, Rala, LOC434585, LOC382732, 1600012F09Rik, Vdac3-ps1, LOC625310, 4930448F12Rik, Pou6f2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037B22.bB6Ng01-037B22.g
ACCDH865091DH865092
length9851,079
definitionDH865091|Mus musculus domesticus DNA, BAC clone: B6Ng01-037B22, 5' end.DH865092|Mus musculus domesticus DNA, BAC clone: B6Ng01-037B22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(17,552,651 - 17,552,932)(13,532,247 - 13,533,326)
sequence
gaattcttcaggtttcttgtatgttcatgggcatctctttcattaggtta
gggaagttttcttctataattttgttgaagatatttactgaccctttaag
ttgaacatcttcattctcatctacatctattatccttaggtttgttcttc
ccatagtgtcttggatttcctggatgtttttgggttaagagctttttaca
tatttcattttcattaagtgttttgtcaatgttttctatggaatcttctg
cacccaagagtctctcttctatctcttgtattctgttggtgatgctttca
tctatgattcctgatttctttcctaggttttctatctccagagttgtctt
cctttgtgatttctttactttttatactttcatttttaaatcctggatga
ttttgttcaattatttcacctgtttggttgtgttttcctataattcttta
aaggatttttgtgttttcctttttaagggcttctacctgtttaactatgt
tctcctatatttctttcaaggagctattaatgttcttcttaaaattccct
atcagcatcgtgaaatatgatttttagtctgaatcttgcttttctggtgt
gttgggctatcttggactcactgtggtaggagcactaggttctgatgatg
ccaggcattattggtttctgttgttaagattctgtgtttgcctttcacca
tctggtaatctctagtgttagatgttcttgttgtctctggcttgaacttg
ttccttgtatgagtctgtaagcctgtgtaagcactcctgggagaccagct
ctatcctggcaagacaagtgcacagagagctgcagaaagccccaccttct
aggtgcagatgtaggccaataggaccatgtcccagctgctcttccatttt
tgtggcccgtgtgctcctgagtagaactgccttagagatcacagtagaga
aaatggtgatatcccctgagtcccagaatcagagc
gaattcagaagatggaggtgattttaaggaatattaagtttattgctttt
gtctttttccccttatgtgtattttatgtatatgggagtttgcctgcacg
tatgtctgagcaccacatatgtgtagtgccagaagagggtaacagactcc
ctgctgggactggggatcctatctctgtgttgggaatggaacctgagtta
aatgttcttaactgctgacccatctcatctctccagcctgttacttattt
tactaagcattgtgatgatgatgacgatgactatgatgatgcatctgggc
acatgtgtgtgcatgtgtacatatgggtacatgtgtggagcctagagggc
gggtgaccttaggaatgggttttcttctgttgctatgagctgcagggatg
ggatttaggtaactcaagacttcaggctgtgagacaagagcctttatctg
ctgtgccatcttgctgaccccaatggcttttagactttagttgctcagga
atgtatgatggagttcactaggggatgtatgatacccacatgtctgttcc
cacaggcaaacgaagaagcatctatctgccttccatatagttggacatca
ggttgatttgcagacacgtgaaggaaagtctcatctcttcatatacttca
tgatgtgtattttttaaaaagatttatttattaatttattttaatgtata
tgagtacactgttgctgtcttcagacacaccagaagagggcatcagatcc
cattacagatgattgtaggccactatgtggtttgcttgggaattgaactc
aggacctgtggaaggagcagtcagtgctatttctcaagccctcttccaaa
tgtattttgggttgaaactataatcaccctgcattaaaatatgctgtttt
tgttcacacgtgacaaattcattattaaagtgtttagtatttaacttgat
tcttgcttcccctttcaaatgataatgttgattaggattggggaatcttc
aaactagaaatttccaaaggtctcagagtcaattccgagggctggatcat
aatatataaaatacagacattggataaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_17552651_17552932
seq2: B6Ng01-037B22.b_58_340 (reverse)

seq1  AGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGCAGA  50
      ||||||| |||||||||||||||||| ||||||||| |||  ||||||||
seq2  AGCATCACCAACAGAATACAAGAGATAGAAGAGAGACTCTTGGGTGCAGA  50

seq1  AGATTCCATAGAGAACATCGGCACAACAATCAAAGAAAATAAAAAACGCA  100
      |||||||||||| ||||| | || |||| | || |||||| ||| | | |
seq2  AGATTCCATAGAAAACATTGACAAAACACTTAATGAAAATGAAATATGTA  100

seq1  CAAAGATCCTAACTC-AAAACATCCAGAAAATCCAGGACACAATGCGAAG  149
       |||| || |||| | ||||||||||| ||||||| ||||| ||| ||||
seq2  AAAAGCTCTTAACCCAAAAACATCCAGGAAATCCAAGACACTATGGGAAG  150

seq1  ACCAAACCTATGGATAATAGGAGTAGATGAGAATGAAGATTTTCAACTCA  199
      | |||||||| |||||||||  |||||||||||||||||| ||||||| |
seq2  AACAAACCTAAGGATAATAGATGTAGATGAGAATGAAGATGTTCAACTTA  200

seq1  AAGGACCAGCAAATATCTTCAACAAAATTATAGAAGAAAACTTCCCAAAC  249
      ||||  ||| |||||||||||||||||||||||||||||||||||| |||
seq2  AAGGGTCAGTAAATATCTTCAACAAAATTATAGAAGAAAACTTCCCTAAC  250

seq1  CTAAAGAAAGACATGCCCATGAACATACAAGAA  282
      |||| |||||| |||||||||||||||||||||
seq2  CTAATGAAAGAGATGCCCATGAACATACAAGAA  283

seq1: chr13_13532247_13533326
seq2: B6Ng01-037B22.g_68_1146

seq1  GAATTCAGAAGATGGAGGTGATTTTAAGGAATATTAAGTTTATTGCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAGATGGAGGTGATTTTAAGGAATATTAAGTTTATTGCTTTT  50

seq1  GTCTTTTTCCCCTTATGTGTATTTTATGTATATGGGAGTTTGCCTGCACG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTTTCCCCTTATGTGTATTTTATGTATATGGGAGTTTGCCTGCACG  100

seq1  TATGTCTGAGCACCACATATGTGTAGTGCCAGAAGAGGGTAACAGACTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGAGCACCACATATGTGTAGTGCCAGAAGAGGGTAACAGACTCC  150

seq1  CCGCTGGGACTGGGGATCCTATCTCTGTGTTGGGAATGGAACCTGGGTTA  200
      | ||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGCTGGGACTGGGGATCCTATCTCTGTGTTGGGAATGGAACCTGAGTTA  200

seq1  AATGTTCTTAACTGCTGACCCATCTCATCTCTCCAGCCCGTTACTTATTT  250
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AATGTTCTTAACTGCTGACCCATCTCATCTCTCCAGCCTGTTACTTATTT  250

seq1  TACTAAGCATTGTGATGATGATGACGATGACTATGATGATGCATCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAGCATTGTGATGATGATGACGATGACTATGATGATGCATCTGGGC  300

seq1  ACATGTGTGTGCATGTGTACATATGGGTACATGTGTGGAGCCTAGAGGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGTGTGCATGTGTACATATGGGTACATGTGTGGAGCCTAGAGGGC  350

seq1  GGGTGACCTTAGGAATGGGTTTTCTTCTGTTGTTATGAGCTGCAGGGATG  400
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGGTGACCTTAGGAATGGGTTTTCTTCTGTTGCTATGAGCTGCAGGGATG  400

seq1  GGATTTAGGTAACTCAAGACTTCAGGCTGTGAGACAA------------G  438
      |||||||||||||||||||||||||||||||||||||            |
seq2  GGATTTAGGTAACTCAAGACTTCAGGCTGTGAGACAAGAGCCTTTATCTG  450

seq1  CTGTGCCATCTTGCTGACCCCAATGGCTTTTAGACTTTAGTTGCTCAGGA  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCCATCTTGCTGACCCCAATGGCTTTTAGACTTTAGTTGCTCAGGA  500

seq1  ATGTATGATGGAGTTCACTACGGGATGCATGATACCCACATGTCTGTTCC  538
      |||||||||||||||||||| |||||| ||||||||||||||||||||||
seq2  ATGTATGATGGAGTTCACTAGGGGATGTATGATACCCACATGTCTGTTCC  550

seq1  CACAGGCAAACGAAGAAGCATCTATCTGCCTTCCATATAGTTGGACATCA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCAAACGAAGAAGCATCTATCTGCCTTCCATATAGTTGGACATCA  600

seq1  GGTTGATTTGCAGACACACACGTGAAGGAAAGTCTCATCTCTTCATATAC  638
      |||||||||||||    |||||||||||||||||||||||||||||||||
seq2  GGTTGATTTGCAG----ACACGTGAAGGAAAGTCTCATCTCTTCATATAC  646

seq1  TTCATGATGTGTA-TTTTTAAAAAGATTTATTTATTAATTTA-TTTAATG  686
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  TTCATGATGTGTATTTTTTAAAAAGATTTATTTATTAATTTATTTTAATG  696

seq1  TATATGAGTACACTGTTGCTGTCTTCAGACACACCAGAAGAGGGCGTCAG  736
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TATATGAGTACACTGTTGCTGTCTTCAGACACACCAGAAGAGGGCATCAG  746

seq1  ATCCCATTACAGATGATTGTAGGCCACTATGTGG-TTGC-TGGGAATTGA  784
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  ATCCCATTACAGATGATTGTAGGCCACTATGTGGTTTGCTTGGGAATTGA  796

seq1  ACTCAGGACCTGTGGAA-GAGCAGTCAGTGCTATCTCTCAAGCCCTC-TC  832
      ||||||||||||||||| |||||||||||||||| |||||||||||| ||
seq2  ACTCAGGACCTGTGGAAGGAGCAGTCAGTGCTATTTCTCAAGCCCTCTTC  846

seq1  CAAATGTATTTTTGGTTGGAACTATAATCA-CCTGCATTAAAATAATGCT  881
      |||||||||||| ||||| ||||||||||| ||||||||||||| |||||
seq2  CAAATGTATTTTGGGTTGAAACTATAATCACCCTGCATTAAAAT-ATGCT  895

seq1  GTTTTTGTTCACACGTGACAAATTCATTATTAAAGTGTTTTAAGTATTTA  931
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  GTTTTTGTTCACACGTGACAAATTCATTATTAAAGTGTTT--AGTATTTA  943

seq1  ACTTGATCTTTGCTTCCCCTTTCCATACGATTAAATGTTGATTATGGTCT  981
      |||||||  ||||||||||||| || | |||  ||||||||||| |    
seq2  ACTTGATTCTTGCTTCCCCTTT-CAAATGAT--AATGTTGATTAGG---A  987

seq1  TGGGGGAATCTTCAAAACTGAAATGTTCAAAGGGCTCCAGAAGTCAAAAT  1031
      | ||||||||||||||   ||||| | |||||| || ||| ||||||   
seq2  TTGGGGAATCTTCAAACTAGAAATTTCCAAAGGTCT-CAG-AGTCAA---  1032

seq1  TCCCGAGGGCT-GATCATAAATATATAAAATCAAGACATTGAGTATAAAG  1080
      | ||||||||| |||||| ||||||||||||  |||||||  | ||||||
seq2  TTCCGAGGGCTGGATCAT-AATATATAAAATACAGACATT--GGATAAAG  1079