BAC Information

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BAC

Clone NameB6Ng01-037F22
Chromosome13 (Build37)
Map Location 36,674,122 - 36,786,377
singlet/doubletdoublet
Overlap genenone
Upstream geneCdyl, Rpp40, LOC100041568, Ppp1r3g, Lyrm4, LOC100042773, Fars2, LOC100041590, LOC666758
Downstream geneNrn1, F13a1, Ly86, LOC100042794, LOC100042800, LOC100042802, LOC100041624
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-037F22.bB6Ng01-037F22.g
ACCDH865257DH865258
length1,106901
definitionDH865257|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F22, 5' end.DH865258|Mus musculus domesticus DNA, BAC clone: B6Ng01-037F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,785,249 - 36,786,377)(36,674,122 - 36,675,046)
sequence
gaattcaccagctttaggtttagtgagggtcacagggtagacattgttct
cgctagtatcggttttctgctctcgaggataagatgtctaaagttctgtc
tttaccatgcttctctgatctatgattggtgattagttggtgactccata
gaatgagttagtcctatggatttgtggcttcactgtcagatctattacca
tcccctctttgaggacaggacttcatctttactttgcaaacctccctttc
ccagtttttggtgtcaatgggtatcaaggtctcgttaatacaaaaggaag
aaatcatcaactccatcagtggttgctgaacaacgctggcaatcagcatg
aacaccagagagcaccgggagtctgaacaccaggcgtttctccttgccct
gagaacccaacccacacaaagtggcctctcagggactcccatcttggcca
tgtgctagagaagttattttttaagacaattgaatggatctttaatcttg
aaaattccaatcttatttccaatttgaaaagtctcttcggtaattatttt
aggaaatctcgggaactacttgatgatgcgaatacattcctcagttcctt
tggggaacttttatgtaacgtgttatttgagtatagcagagctatgcatt
tggcaacagaatgatgcagagtctctgctagaaaggaacacctgttggca
ctattaaccacgctcagctcgatgaacagatgagtaaatatgccagtgct
tacatcccaggacccaaagacattcagatttaaaggacatgcctttcacc
ttaaaggagtaattgattggcctgggtctctccatgtctttgctctctgt
ttctctcattctggtgcatgtgtatagatatataaatgtgtgtgtgtgtg
atttacatttcaaaaactcggtactcatagattctctatattgaggagga
tgtgatagcaatagttatatttgggtctgtagggttcagtggtgtattct
gctgggttcattgtagtaattaactccagcacattattttatttttaatt
tgttaggtattgctcatgcattcaggcttcccaaagtcccgataccaacc
cactcc
gaattcctgtcctctgcaagagcggtccttattctcaacagctaagtcat
ctctccagaccctacagtctccctcttgatgtatggacccagaccagtct
ttgccagtctcccaccctggccagtacttgctaccatgtccttgagcctc
tggttttctctgagtctcagcgtcagttcggcagaagagacacatgcagg
gctactgtgatgaatctagagagatacctaacacaggagggccacacaaa
atccagcaacgccagggttttctgctcctgaaaactgtctttaattactc
tccgtcccttcccaattaaataaagcggagcagcaggaacagcagccagg
aaacacgctctgaggtacttttcggcactgcctgctggaggaacattagc
atccccagcggttatgaatgccatgctccgcccacaccaggagcccctgg
atcaagtgtgttcctcttgattgctttgtttctgtgcctctctgtcaggt
tctcaagggctatgttgctgcctttatctggggaactcagagttaagcct
ttcacctccatttattaggcacagcagctacaggaactctatgttgccca
gtagggactttagcacccaagggggaatagctgtccctccgtgaagctgt
gatatcctttagaagccagtgagctgctttctgaggtggtctttgtattt
tcctggctcccagggaaggcaaaatcctggggatctgctgagtgctgtcc
accctgctcatttggctgtgcacagtctcagtgcagttccttgaggagac
acctattggccacgggccctctgatgagacggtgtagtcctgctagactt
gacaccaacaagccttgacttggatcttcagacttgaccgaaggtttcag
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_36785249_36786377
seq2: B6Ng01-037F22.b_43_1148 (reverse)

seq1  GGAGTGGGGGTTTGGGTATCGGGACTTTTGGGATAGCATTGGAAATGTAA  50
      ||||||||    | ||||||||||| ||||||| ||| |  |||   |  
seq2  GGAGTGGG----TTGGTATCGGGAC-TTTGGGA-AGCCT--GAA---TGC  39

seq1  ATGAGGAAAATACCTAATAAAAAATTAAAAAAATAAAATAAAATGTGCTG  100
      |||||   ||||||   ||| |||||  |||||||||||  |||||||||
seq2  ATGAG--CAATACC---TAACAAATT--AAAAATAAAAT--AATGTGCTG  80

seq1  GAGTATATTACTACAATGAACCCAGCAGAATACCACACTGAACCCTTACA  150
      ||||  |||||||||||||||||||||||||||  |||||||||| ||||
seq2  GAGTTAATTACTACAATGAACCCAGCAGAATACACCACTGAACCC-TACA  129

seq1  GACCC-AATATAACTATTGCTATCACATCCTCCTCAATATTAGAAGAATC  199
      ||||| ||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GACCCAAATATAACTATTGCTATCACATCCTCCTCAATA-TAG-AGAATC  177

seq1  TATGAAGTACCGAGTTTTTTGAAATGTAAATCACACACACACACATTTAT  249
      |||| ||||||||| |||||||||||||||||||||||||||||||||||
seq2  TATG-AGTACCGAG-TTTTTGAAATGTAAATCACACACACACACATTTAT  225

seq1  ATATCTATACACATGCA-CAGAATGAGAGAAACAGAGAGCAAAGACATGG  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATATCTATACACATGCACCAGAATGAGAGAAACAGAGAGCAAAGACATGG  275

seq1  AGAGACCCAGGCCAATCAATTACTCCTTTAAGGTGAAAGGCATGTCCTTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACCCAGGCCAATCAATTACTCCTTTAAGGTGAAAGGCATGTCCTTT  325

seq1  AAATCTGAATGTCTTTGGGTCCTGGGATGTAAGCACTGGCATATTTACTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAATGTCTTTGGGTCCTGGGATGTAAGCACTGGCATATTTACTC  375

seq1  ATCTGTTCATCGAGCTGAGCGTGGTTAATAGTGCCAACAGGTGTTCCTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTCATCGAGCTGAGCGTGGTTAATAGTGCCAACAGGTGTTCCTTT  425

seq1  CTAGCAGAGACTCTGCATCATTCTGTTGCCAAATGCATAGCTCTGCTATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGAGACTCTGCATCATTCTGTTGCCAAATGCATAGCTCTGCTATA  475

seq1  CTCAAATAACACGTTACATAAAAGTTCCCCAAAGGAACTGAGGAATGTAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAATAACACGTTACATAAAAGTTCCCCAAAGGAACTGAGGAATGTAT  525

seq1  TCGCATCATCAAGTAGTTCCCGAGATTTCCTAAAATAATTACCGAAGAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCATCATCAAGTAGTTCCCGAGATTTCCTAAAATAATTACCGAAGAGA  575

seq1  CTTTTCAAATTGGAAATAAGATTGGAATTTTCAAGATTAAAGATCCATTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAAATTGGAAATAAGATTGGAATTTTCAAGATTAAAGATCCATTC  625

seq1  AATTGTCTTAAAAAATAACTTCTCTAGCACATGGCCAAGATGGGAGTCCC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTCTTAAAAAATAACTTCTCTAGCACATGGCCAAGATGGGAGTCCC  675

seq1  TGAGAGGCCACTTTGTGTGGGTTGGGTTCTCAGGGCAAGGAGAAACGCCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCCACTTTGTGTGGGTTGGGTTCTCAGGGCAAGGAGAAACGCCT  725

seq1  GGTGTTCAGACTCCCGGTGCTCTCTGGTGTTCATGCTGATTGCCAGCGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTCAGACTCCCGGTGCTCTCTGGTGTTCATGCTGATTGCCAGCGTT  775

seq1  GTTCAGCAACCACTGATGGAGTTGATGATTTCTTCCTTTTGTATTAACGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGCAACCACTGATGGAGTTGATGATTTCTTCCTTTTGTATTAACGA  825

seq1  GACCTTGATACCCATTGACACCAAAAACTGGGAAAGGGAGGTTTGCAAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTGATACCCATTGACACCAAAAACTGGGAAAGGGAGGTTTGCAAAG  875

seq1  TAAAGATGAAGTCCTGTCCTCAAAGAGGGGATGGTAATAGATCTGACAGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGATGAAGTCCTGTCCTCAAAGAGGGGATGGTAATAGATCTGACAGT  925

seq1  GAAGCCACAAATCCATAGGACTAACTCATTCTATGGAGTCACCAACTAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCACAAATCCATAGGACTAACTCATTCTATGGAGTCACCAACTAAT  975

seq1  CACCAATCATAGATCAGAGAAGCATGGTAAAGACAGAACTTTAGACATCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAATCATAGATCAGAGAAGCATGGTAAAGACAGAACTTTAGACATCT  1025

seq1  TATCCTCGAGAGCAGAAAACCGATACTAGCGAGAACAATGTCTACCCTGT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCGAGAGCAGAAAACCGATACTAGCGAGAACAATGTCTACCCTGT  1075

seq1  GACCCTCACTAAACCTAAAGCTGGTGAATTC  1129
      |||||||||||||||||||||||||||||||
seq2  GACCCTCACTAAACCTAAAGCTGGTGAATTC  1106

seq1: chr13_36674122_36675046
seq2: B6Ng01-037F22.g_67_967

seq1  GAATTCCTGTCCTCTGCAAGAGCGGTCCTTATTCTCAACAGCTAAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCCTCTGCAAGAGCGGTCCTTATTCTCAACAGCTAAGTCAT  50

seq1  CTCTCCAGACCCTACAGTCTCCCTCTTGATGTATGGACCCAGACCAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGACCCTACAGTCTCCCTCTTGATGTATGGACCCAGACCAGTCT  100

seq1  TTGCCAGTCTCCCACCCTGGCCAGTACTTGCTACCATGTCCTTGAGCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGTCTCCCACCCTGGCCAGTACTTGCTACCATGTCCTTGAGCCTC  150

seq1  TGGTTTTCTCTGAGTCTCAGCGTCAGTTCGGCAGAAGAGACACATGCAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTCTCTGAGTCTCAGCGTCAGTTCGGCAGAAGAGACACATGCAGG  200

seq1  GCTACTGTGATGAATCTAGAGAGATACCTAACACAGGAGGGCCACACAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGTGATGAATCTAGAGAGATACCTAACACAGGAGGGCCACACAAA  250

seq1  ATCCAGCAACGCCAGGGTTTTCTGCTCCTGAAAACTGTCTTTAATTACTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCAACGCCAGGGTTTTCTGCTCCTGAAAACTGTCTTTAATTACTC  300

seq1  TCCGTCCCTTCCCAATTAAATAAAGCGGAGCAGCAGGAACAGCAGCCAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCCCTTCCCAATTAAATAAAGCGGAGCAGCAGGAACAGCAGCCAGG  350

seq1  AAACACGCTCTGAGGTACTTTTCGGCACTGCCTGCTGGAGGAACATTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACGCTCTGAGGTACTTTTCGGCACTGCCTGCTGGAGGAACATTAGC  400

seq1  ATCCCCAGCGGTTATGAATGCCATGCTCCGCCCACACCAGGAGCCCCTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAGCGGTTATGAATGCCATGCTCCGCCCACACCAGGAGCCCCTGG  450

seq1  ATCAAGTGTGTTCCTCTTGATTGCTTTGTTTCTGTGCCTCTCTGTCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGTGTTCCTCTTGATTGCTTTGTTTCTGTGCCTCTCTGTCAGGT  500

seq1  TCTCAAGGGCTATGTTGCTGCCTTTATCTGGGGAACTCAGAGTTAAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGGGCTATGTTGCTGCCTTTATCTGGGGAACTCAGAGTTAAGCCT  550

seq1  TTCACCTCCATTTATTAGGCACAGCAGCTACAGGAACTCTATGTTGCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCTCCATTTATTAGGCACAGCAGCTACAGGAACTCTATGTTGCCCA  600

seq1  GTAGGGACTTTAGCACCCAAGGGGGAATAGCTGTCCCTCCGTGAAGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGGACTTTAGCACCCAAGGGGGAATAGCTGTCCCTCCGTGAAGCTGT  650

seq1  GATATCCTTTAGAAGCCAGTGAGCTGCTTTCTGAGGTGGTCTTTGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GATATCCTTTAGAAGCCAGTGAGCTGCTTTCTGAGGTGGTCTTTG-TATT  699

seq1  TTCCTGGCTTCCCAAGGGAAGGCAAAAATCCTGGGGAGTCTGCTGAGTGC  750
      |||||||||  || ||||||||| ||||||||||||| ||||||||||| 
seq2  TTCCTGGCT--CCCAGGGAAGGC-AAAATCCTGGGGA-TCTGCTGAGTG-  744

seq1  CTGTCCACCCTGCTCATTTGGCTGTGCACAGTCTTCAGTGCAGTTCCTTG  800
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGTCCACCCTGCTCATTTGGCTGTGCACAGTC-TCAGTGCAGTTCCTTG  793

seq1  AAGGAGAACATCCTA-TGGCCACGGGCCCTCTGATGAGACCGCTGTAAAG  849
       ||||| ||| |||| ||||||||||||||||||||||| || |||  ||
seq2  -AGGAG-ACA-CCTATTGGCCACGGGCCCTCTGATGAGA-CGGTGT--AG  837

seq1  TCCTGCTAGACTTGTACACACAACAAGCCCTTTGACTTTGGGATCCTTCA  899
      |||||||||||||| |||| |||||||||  |||||||  |||| |||||
seq2  TCCTGCTAGACTTG-ACAC-CAACAAGCC--TTGACTT--GGAT-CTTCA  880

seq1  GGAGCTTGAGACCGAAGGTTCTCAGC  925
      |   |||  ||||||||||| |||||
seq2  G--ACTT--GACCGAAGGTT-TCAGC  901