BAC Information

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BAC

Clone NameB6Ng01-041E24
Chromosome13 (Build37)
Map Location 60,389,090 - 60,389,785
singlet/doubletsinglet
Overlap genenone
Upstream geneAgtpbp1, Mak10, Golph2, 4921517D22Rik, 1700013B16Rik, EG238662, 4932411G14Rik, Isca1, Zcchc6, LOC100041267, Gas1, EG328264
Downstream geneDapk1, LOC218274, BC051665, 2310051M13Rik, 4930486L24Rik, Tpbpb, Ctla2a, Tpbpa, Ctsj, Ctsq, Ctsr, Cts6, Cts8, Cts8-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041E24.bB6Ng01-041E24.g
ACCDH868009DH868010
length1,047696
definitionDH868009|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E24, 5' end.DH868010|Mus musculus domesticus DNA, BAC clone: B6Ng01-041E24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaaccttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctatgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtcctttttccactggatggttttagctcccttgtagaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaaaacaattgc
tctgtagtaaagcttttaggtcaggcatggtgattccacctgaagttctt
ttatccttgagaagactttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggtaagatagccatt
tttacaatgtttatcctgccaattcatgagcatgggagatcttttcatct
ttctgagatctttcttttaatttcttttcttcagagatttgaagttttta
tcataagatccttttactttcttaataagagtcacgccaagaatatttta
tattattgtgactattgaggatgggggtgtttgctaatttccttctcacc
cttttatccttgaaagaacaaaggtcattgaccttgtttgagttaat
gaattccactgttgcaagggataaaaaaataccagaggtctggtggaaat
gtgcctcttggctctcaggaccaaacattccagagcctggtacaggctgt
cgatccagagttgaaataacactgctagtaatttgtctgtctcaggtggt
ttggagtgtaggaaaactgggcgtacaatctgagtcagccacggtgtgcc
agctccaattctgagagcccggggcaggaacacgacttttctttcttagt
tctgtatcatgagagacttgctagccttgcctgagtctgcaaggtgacct
ctgctctggcttctatatcgccgtctccctcaggtgggctcttccacaca
aagcctagagaaggttaacaaaactctggccacagttgttatcagtgccc
ggccccctaagcccaggccccggcctcctcccaaaatgttctccctagta
cttactagaaagtagaaacacacagtttgtgtgcagcagtcctgaaaacc
cagcctgggtgtgtcagacccattcaatgtgctgggctctccacactatt
gcctttcccccaagacattcagctaaacaacagcttttaggttcagtctt
gtgataagtccccagagcatgacagagccattactaaacggaactccatc
ctggtcaccatataaggaacagtcaattgggcaggtatgtatcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_60389090_60389785
seq2: B6Ng01-041E24.g_72_767

seq1  GAATTCCACTGTTGCAAGGGATAAAAAAATACCAGAGGTCTGGTGGAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGTTGCAAGGGATAAAAAAATACCAGAGGTCTGGTGGAAAT  50

seq1  GTGCCTCTTGGCTCTCAGGACCAAACATTCCAGAGCCTGGTACAGGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTTGGCTCTCAGGACCAAACATTCCAGAGCCTGGTACAGGCTGT  100

seq1  CGATCCAGAGTTGAAATAACACTGCTAGTAATTTGTCTGTCTCAGGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATCCAGAGTTGAAATAACACTGCTAGTAATTTGTCTGTCTCAGGTGGT  150

seq1  TTGGAGTGTAGGAAAACTGGGCGTACAATCTGAGTCAGCCACGGTGTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGTAGGAAAACTGGGCGTACAATCTGAGTCAGCCACGGTGTGCC  200

seq1  AGCTCCAATTCTGAGAGCCCGGGGCAGGAACACGACTTTTCTTTCTTAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCAATTCTGAGAGCCCGGGGCAGGAACACGACTTTTCTTTCTTAGT  250

seq1  TCTGTATCATGAGAGACTTGCTAGCCTTGCCTGAGTCTGCAAGGTGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATCATGAGAGACTTGCTAGCCTTGCCTGAGTCTGCAAGGTGACCT  300

seq1  CTGCTCTGGCTTCTATATCGCCGTCTCCCTCAGGTGGGCTCTTCCACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCTGGCTTCTATATCGCCGTCTCCCTCAGGTGGGCTCTTCCACACA  350

seq1  AAGCCTAGAGAAGGTTAACAAAACTCTGGCCACAGTTGTTATCAGTGCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAGAGAAGGTTAACAAAACTCTGGCCACAGTTGTTATCAGTGCCC  400

seq1  GGCCCCCTAAGCCCAGGCCCCGGCCTCCTCCCAAAATGTTCTCCCTAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCCTAAGCCCAGGCCCCGGCCTCCTCCCAAAATGTTCTCCCTAGTA  450

seq1  CTAACTAGAAAGTAGAAACACACAGTTTGTGTGCAGCAGTCCTGAAAACC  500
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAGAAAGTAGAAACACACAGTTTGTGTGCAGCAGTCCTGAAAACC  500

seq1  CAGCCTGGGTGTGTCAGACCCATTCAATGTGCTGGGCTCTCCACACTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGGGTGTGTCAGACCCATTCAATGTGCTGGGCTCTCCACACTATT  550

seq1  GCCTTTCCCCCAAGACATTCAGCTAAACAACAGCTTTTAGGTTCAGTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTCCCCCAAGACATTCAGCTAAACAACAGCTTTTAGGTTCAGTCTT  600

seq1  GTGATAAGTCCCCAGAGCATGACAGAGCCATTACTAAACGGAACTCCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATAAGTCCCCAGAGCATGACAGAGCCATTACTAAACGGAACTCCATC  650

seq1  CTGGTCACCATATAAGGAACAGTCAATTGGGCAGGTATGTATCAAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCACCATATAAGGAACAGTCAATTGGGCAGGTATGTATCAAA  696