BAC Information

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BAC

Clone NameB6Ng01-041O10
Chromosome13 (Build37)
Map Location 99,539,009 - 99,634,980
singlet/doubletdoublet
Overlap geneFcho2, Tnpo1
Upstream geneRgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675
Downstream geneEG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797, Zfp366, Ptcd2, Mrps27, Mtap1b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041O10.bB6Ng01-041O10.g
ACCDH868427DH868428
length930229
definitionDH868427|Mus musculus domesticus DNA, BAC clone: B6Ng01-041O10, 5' end.DH868428|Mus musculus domesticus DNA, BAC clone: B6Ng01-041O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,539,009 - 99,539,940)(99,634,755 - 99,634,980)
sequence
gaattcacccaaactaatttgaatcagaacttttaagaaatattacaaaa
ggaaaaagaaactttttaatcttaaaccaccaaaattattttgttgatga
ggttgaatataaatatgtgacatatttagacatattaaacagttcacatt
accgtggaatgaatcctaaatctcagaccagcaacagagcacatttatgc
ctttcacactaaaaactgccttaagaggctggagagacagcacagtagtt
aagagcaccaggtctcgcagagaaccagataataaaaaagaaatttctaa
agtgacacatttataatttagttatcttagtcttaatttaaacatcctta
ataattaaagtctgtgtcttttcatgtgtttttcttttcttttcttttta
ttctattcacatatttttgtttaactattaaaatttttaattttttttaa
agatttacttattttaagtatatgagtgcactgtagctgtgcagatggtt
gtgagccatcatgtggttgctgggaattgaatttaggacctctgctcgct
ccagccctgacaatgtagctgtcttcagacacatcagaagagggcatcag
atctcattacggacggttgtgagccaccatgtggttgctgggatttgaac
ttaggaccttctgcagagcagtcagtgctcttaactgctgagccatctct
ccagcccaaaatgttttttttgttgttgttgttgtcattgttgctgttat
tttaactgttaaaattatgtattttggaccaggtaatggtggcacatact
tttaatcccagaatttaggagacagagacagacacaggcagatctctgag
gtcagcctgttcttccagagggagttccaacaaaacagaacaaattaaat
accattatttttatgttagggcacatactt
tccgctgactttggctgaacagccaatatgcaaagatgtacttgtaaggc
atctaccaaagtaagtgtcctgcacagagtgctgcttgccctcagcacac
tcagactctcagcgtgcatcctcacaccgtagagaggtttctaaagcagc
tgcttcattatcactgtcagtagactttcagggtttcctgtgggggctga
tgcacaggtgccagaacaggtgtgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_99539009_99539940
seq2: B6Ng01-041O10.b_44_973

seq1  GAATTCACCCAAACTAATTTGAATCAGAACTTTTAAGAAATATTACAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCAAACTAATTTGAATCAGAACTTTTAAGAAATATTACAAAA  50

seq1  GGAAAAAGAAACTTTTTAATCTTAAACCACCAAAATTATTTTGTTGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAGAAACTTTTTAATCTTAAACCACCAAAATTATTTTGTTGATGA  100

seq1  GGTTGAATATAAATATGTGACATATTTAGACATATTAAACAGTTCACATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATATAAATATGTGACATATTTAGACATATTAAACAGTTCACATT  150

seq1  ACCGTGGAATGAATCCTAAATCTCAGACCAGCAACAGAGCACATTTATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGGAATGAATCCTAAATCTCAGACCAGCAACAGAGCACATTTATGC  200

seq1  CTTTCACACTAAAAACTGCCTTAAGAGGCTGGAGAGACAGCACAGTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCACACTAAAAACTGCCTTAAGAGGCTGGAGAGACAGCACAGTAGTT  250

seq1  AAGAGCACCAGGTCTCGCAGAGAACCAGATAATAAAAAAGAAATTTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCACCAGGTCTCGCAGAGAACCAGATAATAAAAAAGAAATTTCTAA  300

seq1  AGTGACACATTTATAATTTAGTTATCTTAGTCTTAATTTAAACATCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACACATTTATAATTTAGTTATCTTAGTCTTAATTTAAACATCCTTA  350

seq1  ATAATTAAAGTCTGTGTCTTTTCATGTGTTTTTCTTTTCTTTTCTTTTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAAAGTCTGTGTCTTTTCATGTGTTTTTCTTTTCTTTTCTTTTTA  400

seq1  TTCTATTCACATATTTTTGTTTAACTATTAAAATTTTTAATTTTTTTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTCACATATTTTTGTTTAACTATTAAAATTTTTAATTTTTTTTAA  450

seq1  AGATTTACTTATTTTAAGTATATGAGTGCACTGTAGCTGTGCAGATGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTACTTATTTTAAGTATATGAGTGCACTGTAGCTGTGCAGATGGTT  500

seq1  GTGAGCCATCATGTGGTTGCTGGGAATTGAATTTAGGACCTCTGCTCGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCCATCATGTGGTTGCTGGGAATTGAATTTAGGACCTCTGCTCGCT  550

seq1  CCAGCCCTGACAATGTAGCTGTCTTCAGACACATCAGAAGAGGGCATCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTGACAATGTAGCTGTCTTCAGACACATCAGAAGAGGGCATCAG  600

seq1  ATCTCATTACGGACGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCATTACGGACGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAAC  650

seq1  TTAGGACCTTCTGCAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGACCTTCTGCAGAGCAGTCAGTGCTCTTAACTGCTGAGCCATCTCT  700

seq1  CCAGCCCAAAATGTTTTTTTTGTTGTTGTTGTTGTCATTGTTGCTGTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCAAAATGTTTTTTTTGTTGTTGTTGTTGTCATTGTTGCTGTTAT  750

seq1  TTTAACTGTTAAAATTATGTATTTTGGACCAGGTAATGGTGGCACATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGTTAAAATTATGTATTTTGGACCAGGTAATGGTGGCACATACT  800

seq1  TTTAATCCCAGAATTTAGGAGACAGAGACAGACACAGGCAGATCTCTGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGAATTTAGGAGACAGAGACAGACACAGGCAGATCTCTGAG  850

seq1  GTCAGCCTGTTC-TCCAGAGGGAGTTCCAACAAAACAGAACAAAATAAAA  899
      |||||||||||| |||||||||||||||||||||||||||| |||| |||
seq2  GTCAGCCTGTTCTTCCAGAGGGAGTTCCAACAAAACAGAAC-AAATTAAA  899

seq1  TACCATTATTTTTATGTATAGGGGCACATACTT  932
      ||||||||||||||||| || ||||||||||||
seq2  TACCATTATTTTTATGT-TA-GGGCACATACTT  930

seq1: chr13_99634755_99634980
seq2: B6Ng01-041O10.g_78_303 (reverse)

seq1  CCCCCCACACCTGTTCTGGCACCTGTGCATCAGCCCCCACAGGAAACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACACCTGTTCTGGCACCTGTGCATCAGCCCCCACAGGAAACCCT  50

seq1  GAAAGTCTACTGACAGTGATAATGAAGCAGCTGCTTTAGAAACCTCTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTACTGACAGTGATAATGAAGCAGCTGCTTTAGAAACCTCTCTA  100

seq1  CGGTGTGAGGATGCACGCTGAGAGTCTGAGTGTGCTGAGGGCAAGCAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGTGAGGATGCACGCTGAGAGTCTGAGTGTGCTGAGGGCAAGCAGCA  150

seq1  CTCTGTGCAGGACACTTACTTTGGTAGATGCCTTACAAGTACATCTTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGCAGGACACTTACTTTGGTAGATGCCTTACAAGTACATCTTTGC  200

seq1  ATATTGGCTGTTCAGCCAAAGTCAGC  226
      ||||||||||||||||||||||||||
seq2  ATATTGGCTGTTCAGCCAAAGTCAGC  226