BAC Information

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BAC

Clone NameB6Ng01-043B20
Chromosome13 (Build37)
Map Location 107,256,908 - 107,257,759
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668025, Olfr717-ps1
Downstream geneLOC631097, EG620949, Ipo11, Dimt1, Kif2a, LOC100040322, LOC100040350, LOC100040366, Apoo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043B20.bB6Ng01-043B20.g
ACCDH869277DH869278
length8541,163
definitionDH869277|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B20, 5' end.DH869278|Mus musculus domesticus DNA, BAC clone: B6Ng01-043B20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtctctacatccataggagttttattttatgaagaaaatcaat
tttcgtattcattaccaaagagaactcctgcgtctcaaaatgtacaatgt
ttataatataaaattttataatacaattatgtataaacaatataattatt
tacataacatttctcatttggtaatatctaatatgatagctaatacaaaa
atctatcaaggtcatctgtatctacttccagaaaacaactagagaccata
atttcaaaaaaaaaaaaaaacctttggagtaatattcacagtaagatgaa
catatactcataaaatactagatataagataagaaagatcaaatctttca
ccacttagtatttttgactatgtggcaaaagctagaattatctgagaaga
tgcctcaattgaaaaaaatgtctgtattagattgactgtaagcatgtttt
aggatattttcttgggctagatagatgaaatatcaggttaagaacactac
gtgctgttcccaaggacccaggtgtgattctctgcagctatagggtagct
cataactgtctataaccttgagacctagggtagctgtggtgtttgactat
gtttggcctaaggagtggcacaatttggaggtatggccttgttggagtag
gtgtggccttgttagaggaagtgtatcactgtacatatgggttttaagac
cctcagcctagctgcctggaagccagtcttctcctagaaacccttaaaat
gaagatgtagaactctcagctcctccttaaccatgcctgcctggatactg
ccatgctcccaccttgatcataagataagccccaatttaatgttgtcctt
ataa
gaattctcacccgaggaataccaaaaggctgagaaacacctgaaaaaatg
ttcaacatctttaatcatcagagaaatgcaaatcataacaacactgagat
tccatctcacaccagtcagaatgactaagatgaaaaattcaggtgacagc
atatgctggcaaggatgtggagaaagaggaacattcctgcattgttggtg
ggattgcaggcttgtacaaccactctggaaatcatctggcggttcctcag
aaaattggacatagtactaccggaggatccagcaatacctctcctggtca
tatatccagaagatgtcccaaccggtaagaaggacacatgctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggataaataaaacgtggtacatttacacaatgg
agtactgctcagctattaaaaagaatgaatttacgaaattcccaggcaaa
tggttggacctggagggcatcatcctgagtgaggtaacccaattacaaac
gaactcaaatgaaatgtactcactgataagcggatattagcccagaaact
tagtatagcgagatataaggtacaatatgcaaaacacatgaaactgaaga
agaacgaagaccaaagtgttaacactttgctccttcttagaattggaaac
aatcacccataaaggagttacagagacaaagtttggagctgagatgaaag
gatggaccatctagagactgccatatccagggatctatcccataatcacc
ctccaaatgatgacaccatttgcatacactagcaagcctttgttgcaagg
accgtgatatagctgtctcttgttggcactagactggggcctagcaaaca
cagaagtggatgctcacagtcaactattggatggatcacagggccccaat
ggaggagctagagaaagtatccaaggagctaagagttctgcaccctatag
tgaacaacattatgaactaacagtaccccagagctctgactctagctgca
tatgtatcaaagatggctagtcgccataactgcaggaagcccattgtcag
ccactttatttgccccatttcaggtaccccaggccaaaaatgtggaatgt
gtgtatgggagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_107256908_107257759
seq2: B6Ng01-043B20.b_42_895

seq1  GAATTCAGTCTCTACATCCATAGGAGTTTTATTTTATGAAGAAAATCAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCTCTACATCCATAGGAGTTTTATTTTATGAAGAAAATCAAT  50

seq1  TTTCGTATTCATTACCAAAGAGAACTCCTGCGTCTCAAAATGTACAATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGTATTCATTACCAAAGAGAACTCCTGCGTCTCAAAATGTACAATGT  100

seq1  TTATAATATAAAATTTTATAATACAATTATGTATAAACAATATAATTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATATAAAATTTTATAATACAATTATGTATAAACAATATAATTATT  150

seq1  TACATAACATTTCTCATTTGGTAATATCTAATATGATAGCTAATACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAACATTTCTCATTTGGTAATATCTAATATGATAGCTAATACAAAA  200

seq1  ATCTATCAAGGTCATCTGTATCTACTTCCAGAAAACAACTAGAGACCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCAAGGTCATCTGTATCTACTTCCAGAAAACAACTAGAGACCATA  250

seq1  ATTTCAAAAAAAAAAAAAAACCTTTGGAGTAATATTCACAGTAAGATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAAAAAAAAAAAAAAACCTTTGGAGTAATATTCACAGTAAGATGAA  300

seq1  CATATACTCATAAAATACTAGATATAAGATAAGAAAGATCAAATCTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTCATAAAATACTAGATATAAGATAAGAAAGATCAAATCTTTCA  350

seq1  CCACTTAGTATTTTTGACTATGTGGCAAAAGCTAGAATTATCTGAGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTAGTATTTTTGACTATGTGGCAAAAGCTAGAATTATCTGAGAAGA  400

seq1  TGCCTCAATTGAAAAAAATGTCTGTATTAGATTGACTGTAAGCATGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAATTGAAAAAAATGTCTGTATTAGATTGACTGTAAGCATGTTTT  450

seq1  AGGATATTTTCTTGGGCTAGATAGATGAAATATCAGGTTAAGAACACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATATTTTCTTGGGCTAGATAGATGAAATATCAGGTTAAGAACACTAC  500

seq1  GTGCTGTTCCCAAGGACCCAGGTGTGATTCTCTGCAGCTATAGGGTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTTCCCAAGGACCCAGGTGTGATTCTCTGCAGCTATAGGGTAGCT  550

seq1  CATAACTGTCTATAACCTTGAGACCTAGGGTAGCTGTGGTGTTTGACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGTCTATAACCTTGAGACCTAGGGTAGCTGTGGTGTTTGACTAT  600

seq1  GTTTGGCCTAAGGAGTGGCACAATTTGGAGGTATGGCCTTGTTGGAGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCCTAAGGAGTGGCACAATTTGGAGGTATGGCCTTGTTGGAGTAG  650

seq1  GTGTGGCCTTGTTAGAGGAAGTGTATCACTGTACATATGGGTTTTAAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGCCTTGTTAGAGGAAGTGTATCACTGTACATATGGGTTTTAAGAC  700

seq1  CCTCAGCCTAGCTGCCTGGAAGCCAGTCTTCTCCTAGAAGCC--TTAAAT  748
      ||||||||||||||||||||||||||||||||||||||| ||  | ||||
seq2  CCTCAGCCTAGCTGCCTGGAAGCCAGTCTTCTCCTAGAAACCCTTAAAAT  750

seq1  GAAGATGTAGAACTCTCAGCTCCTCCTGAACCATGCCTGCCTGGATACTG  798
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GAAGATGTAGAACTCTCAGCTCCTCCTTAACCATGCCTGCCTGGATACTG  800

seq1  CCATGCTCCCACCTTGATCATAAGATAAGCCCCAATTAAATGTTGTCCTT  848
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CCATGCTCCCACCTTGATCATAAGATAAGCCCCAATTTAATGTTGTCCTT  850

seq1  ATAA  852
      ||||
seq2  ATAA  854