BAC Information

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BAC

Clone NameB6Ng01-044J01
Chromosome13 (Build37)
Map Location 38,803,432 - 38,892,685
singlet/doubletdoublet
Overlap genenone
Upstream geneRreb1, Ssr1, Cage1, Riok1, Dsp, 6530403A03Rik, Bmp6, Txndc5, Muted, Eef1e1, LOC621102
Downstream geneSlc35b3, EG666867, LOC100041779, LOC382747
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044J01.bB6Ng01-044J01.g
ACCDH870282DH870283
length365970
definitionDH870282|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J01, 5' end.DH870283|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,803,432 - 38,803,796)(38,892,046 - 38,892,685)
sequence
gaattcttttatggcagccctggaaattccatatggctgctccagcacaa
ttagaagtggggggagtagtacgtcatctttcaatggattgacgtaaact
ttttaccgttacctagaattagagggatcttattgaggcgtgactaaagg
ggccactgtaacagcaatgaaaaggataaatatttgaaaatacgcaagag
tcaatggtgaggaaaataggtatttgtctttacatctaattacaactttt
gattaatttttgttatttaaagttagtgtgtgtgtgtgtgtgtgtgtgtg
tgtagaggtgtgttggatccttggcgttttcaagttggagttattaacta
ttgtgggtgggtttg
gaattcaaggacacctggtttggaaatactagctctcagtttatgacaac
ggtgtcagatggatgaatcctcaaatactgagacctttctccggaaatcc
cagatcctagaagtgtatacccttcagagtagcacaaggagactggaaat
cttgaaggatgggaagtagaataatttctggaagaaaaaagagagttaac
aaactgaacaactcatgtctataggtttggttttgaaagtggtccctgca
gtgtgagatgcctctataatagcagctgagtccctaccccaagcctggtg
cactggttcagtctgaaatgtccaacataggctaatgggttcaaacactt
ggtcctcagcaggtgctactgttttggttaaggtcatgaggatttgctag
cagaggtggatggctggtgacccgactggaagtcatatctgctgctggtg
gggagctgagctctctctatcttggtccagttgcagtgtggaaagcaaca
gtcagaaattccaactgacctagctgaagcagctccaaccagcctgcctt
ctgtgccatagaagactgtctcctcttgagatcaggagccgaaatgaagc
cttcctctctctcttgagttgcttctaggcggttattgtctcgcaaggat
gagctcagtcatggacacagtcattgattctggctttgtgggtctgccct
gcaccttgtgctcagatggcctgcaagtttcccagggaatacccagtcag
tggcttgattcgtgagaacagaacttgaaacacccacagtcactctgtgg
tgttttcaaagcatccctatgagacctaagagctgactcggggtctttcg
ccaacacatcacaataatgtaccaaacacttccaaaaactagaaagaaag
gatttggtatttgtcaaaaccacaaaaaagctaaacgcttggggtgatag
aaatagctaatccgattcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_38803432_38803796
seq2: B6Ng01-044J01.b_42_406

seq1  GAATTCTTTTATGGCAGCCCTGGAAATTCCATATGGCTGCTCCAGCACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTATGGCAGCCCTGGAAATTCCATATGGCTGCTCCAGCACAA  50

seq1  TTAGAAGTGGGGGGAGTAGTACGTCATCTTTCAATGGATTGACGTAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTGGGGGGAGTAGTACGTCATCTTTCAATGGATTGACGTAAACT  100

seq1  TTTTACCGTTACCTAGAATTAGAGGGATCTTATTGAGGCGTGACTAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCGTTACCTAGAATTAGAGGGATCTTATTGAGGCGTGACTAAAGG  150

seq1  GGCCACTGTAACAGCAATGAAAAGGATAAATATTTGAAAATACGCAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACTGTAACAGCAATGAAAAGGATAAATATTTGAAAATACGCAAGAG  200

seq1  TCAATGGTGAGGAAAATAGGTATTTGTCTTTACATCTAATTACAACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGTGAGGAAAATAGGTATTTGTCTTTACATCTAATTACAACTTTT  250

seq1  GATTAATTTTTGTTATTTAAAGTTAGTGTGTGTGTGTGTGTGTGTGTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAATTTTTGTTATTTAAAGTTAGTGTGTGTGTGTGTGTGTGTGTGTG  300

seq1  TGTAGAGGTGTGTTGGATCCTTGGAGTTTTGAAGTTGGAGTTATTAACTA  350
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  TGTAGAGGTGTGTTGGATCCTTGGCGTTTTCAAGTTGGAGTTATTAACTA  350

seq1  TTGTGGGTGGGTTTG  365
      |||||||||||||||
seq2  TTGTGGGTGGGTTTG  365

seq1: chr13_38892046_38892685
seq2: B6Ng01-044J01.g_64_703 (reverse)

seq1  GACAATAACCGCCTAGAAGCAACTCAAGAGAGAGAGGAAGGCTTCATTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATAACCGCCTAGAAGCAACTCAAGAGAGAGAGGAAGGCTTCATTTC  50

seq1  GGCTCCTGATCTCAAGAGGAGACAGTCTTCTATGGCACAGAAGGCAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCTGATCTCAAGAGGAGACAGTCTTCTATGGCACAGAAGGCAGGCT  100

seq1  GGTTGGAGCTGCTTCAGCTAGGTCAGTTGGAATTTCTGACTGTTGCTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGAGCTGCTTCAGCTAGGTCAGTTGGAATTTCTGACTGTTGCTTTC  150

seq1  CACACTGCAACTGGACCAAGATAGAGAGAGCTCAGCTCCCCACCAGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCAACTGGACCAAGATAGAGAGAGCTCAGCTCCCCACCAGCAGC  200

seq1  AGATATGACTTCCAGTCGGGTCACCAGCCATCCACCTCTGCTAGCAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATGACTTCCAGTCGGGTCACCAGCCATCCACCTCTGCTAGCAAATC  250

seq1  CTCATGACCTTAACCAAAACAGTAGCACCTGCTGAGGACCAAGTGTTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGACCTTAACCAAAACAGTAGCACCTGCTGAGGACCAAGTGTTTGA  300

seq1  ACCCATTAGCCTATGTTGGACATTTCAGACTGAACCAGTGCACCAGGCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATTAGCCTATGTTGGACATTTCAGACTGAACCAGTGCACCAGGCTT  350

seq1  GGGGTAGGGACTCAGCTGCTATTATAGAGGCATCTCACACTGCAGGGACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTAGGGACTCAGCTGCTATTATAGAGGCATCTCACACTGCAGGGACC  400

seq1  ACTTTCAAAACCAAACCTATAGACATGAGTTGTTCAGTTTGTTAACTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAAAACCAAACCTATAGACATGAGTTGTTCAGTTTGTTAACTCTC  450

seq1  TTTTTTCTTCCAGAAATTATTCTACTTCCCATCCTTCAAGATTTCCAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTTCCAGAAATTATTCTACTTCCCATCCTTCAAGATTTCCAGTC  500

seq1  TCCTTGTGCTACTCTGAAGGGTATACACTTCTAGGATCTGGGATTTCCGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTGCTACTCTGAAGGGTATACACTTCTAGGATCTGGGATTTCCGG  550

seq1  AGAAAGGTCTCAGTATTTGAGGATTCATCCATCTGACACCGTTGTCATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGTCTCAGTATTTGAGGATTCATCCATCTGACACCGTTGTCATAA  600

seq1  ACTGAGAGCTAGTATTTCCAAACCAGGTGTCCTTGAATTC  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGAGCTAGTATTTCCAAACCAGGTGTCCTTGAATTC  640