BAC Information

Click to search

BAC

Clone NameB6Ng01-044J06
Chromosome13 (Build37)
Map Location 4,381,655 - 4,382,341
singlet/doubletsinglet
Overlap genenone
Upstream gene2810429I04Rik, Gdi2, Asb13, Calml3, Calm4, Calm5, LOC100039279, Net1, Tubal3, Ucn3, Akr1c14, Akr1c18, LOC100039262, Akr1c13, Akr1c19, Akr1c12
Downstream geneAkr1c6, Akr1c20, Akr1c21, Akr1e1, EG432721, EG432723
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044J06.bB6Ng01-044J06.g
ACCDH870292DH870293
length6871,143
definitionDH870292|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J06, 5' end.DH870293|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatctttcaatatgtaggtaaatattataccaacaagcatacttctttaa
ggcaatactgtaattttagatgttttatatcaccctttattaattcatac
acaagcctactattcacacagtacctttgtagtgagaaatatgtcttctc
tcttcaaaacaccttcagcaatcttacttcaaatagcctgtcctgtttcc
ttttcatttttgtacacataagcagaatcaatatggtggaacccagtatc
tattgccattttagtagactctaaaatcttacttgcaggaacctagagga
ggaagcaatggtatgatttggatgaagacgtgctgaaagacatgaattta
aaaatcacctttaaaaatcactgtcaagagatcagttcctagaatcaggt
ttcacaatttcttttccataagcctttacagaacttccagtgagcagaat
gaataacatcggcagaagcagtcactttctcaagagttaccttttacctg
ttttggggtattcagcagagaagactgatggaacataggtttaagccaat
agaaagtctttattagctgacttaagactacactgggccatcactggaaa
gagaggcccattggacttccaaactttatatgccccagtacaggggaaca
tcagggccaaaaagtgggagtgggtgggagggtatgg
gaattctgcaccaagtccatctggtcctgggctttttttggttgagagac
ttttaatgactgttgctctttctttagggattatggaactgtttagttag
ttgacctggtcctgatttgattttcacatttgatatctgtctagaaaatt
gtctatttcatccagatttttcagttttgttgaatatagtcttttgtagt
aggatctgatgatgtttaaatttccttagtttctgtagttatgtctccct
tttgatttctgattttgttaatttggatactgtctgtttgccctctagtt
agtctggtgaagattttatctatcttgttgattttctcaaagaaccagct
tttggtttggttgattctttgtatagttccttttgtttctacttggttga
ttttagccctgagtttgattattttctgctgtctacttgccttgggtgta
tttgcttctttttgttctagaattttcaggtaggctgtcatgctgctagt
gtatgctttccccaacttcactggagacactcagagctatgtattttcct
cttagcactggtttcattttgtcctattagtttgggtatgttgtaccttc
attttcattaaattcttaaaaagtctttaatttctttctttctttcttcc
ttgtacaagttattaagtagagcattgtttagctccccaatgtatatgct
gaacaatgtggttttgtgggttttctgttgtttttgttgtcattaaagac
cagccgtattccatggtgatctgacaggatgcatgcgattatttcaatct
tcttctatttggtgagcatgttttgtgaccaactatgtggtcagttttgg
agaagttaccatgaggtgttgagaagaaagtatagtctttgttttaggat
gaaatgttctatacatatcccttaaaaccatttggttcataacttctgtt
atttcactgtgtctctgtttaatttctgtttccaaatccgcccattgcga
aagtgtcatgttgaagtgtcccactattattgatgaggtaaatggtttgt
taaacttagaaagttactttttataagtgggtggccgtgactaggcacat
taaggtcgaattgaagagccaatgtgtaaattttcctgggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_4381655_4382341
seq2: B6Ng01-044J06.b_54_740

seq1  AATCTTTCAATATGTAGGTAAATATTATACCAACAAGCATACTTCTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCAATATGTAGGTAAATATTATACCAACAAGCATACTTCTTTAA  50

seq1  GGCAATACTGTAATTTTAGATGTTTTATATCACCCTTTATTAATTCATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATACTGTAATTTTAGATGTTTTATATCACCCTTTATTAATTCATAC  100

seq1  ACAAGCCTACTATTCACACAGTACCTTTGTAGTGAGAAATATGTCTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTACTATTCACACAGTACCTTTGTAGTGAGAAATATGTCTTCTC  150

seq1  TCTTCAAAACACCTTCAGCAATCTTACTTCAAATAGCCTGTCCTGTTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAAACACCTTCAGCAATCTTACTTCAAATAGCCTGTCCTGTTTCC  200

seq1  TTTTCATTTTTGTACACATAAGCAGAATCAATATGGTGGAACCCAGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTTTTGTACACATAAGCAGAATCAATATGGTGGAACCCAGTATC  250

seq1  TATTGCCATTTTAGTAGACTCTAAAATCTTACTTGCAGGAACCTAGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCCATTTTAGTAGACTCTAAAATCTTACTTGCAGGAACCTAGAGGA  300

seq1  GGAAGCAATGGTATGATTTGGATGAAGACGTGCTGAAAGACATGAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAATGGTATGATTTGGATGAAGACGTGCTGAAAGACATGAATTTA  350

seq1  AAAATCACCTTTAAAAATCACTGTCAAGAGATCAGTTCCTAGAATCAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCACCTTTAAAAATCACTGTCAAGAGATCAGTTCCTAGAATCAGGT  400

seq1  TTCACAATTTCTTTTCCATAAGCCTTTACAGAACTTCCAGTGAGCAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAATTTCTTTTCCATAAGCCTTTACAGAACTTCCAGTGAGCAGAAT  450

seq1  GAATAACATCGGCAGAAGCAGTCACTTTCTCAAGAGTTACCTTTTACCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACATCGGCAGAAGCAGTCACTTTCTCAAGAGTTACCTTTTACCTG  500

seq1  TTTTGGGGTATTCAGCAGAGAAGACTGATGGAACATAGGTTTAAGCCAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGGGTATTCAGCAGAGAAGACTGATGGAACATAGGTTTAAGCCAAT  550

seq1  AGAAAGTCTTTATTAGCTGACTTAAGACTACACTGGGCCATCACTGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCTTTATTAGCTGACTTAAGACTACACTGGGCCATCACTGGAAA  600

seq1  GAGAGGCCCATTGGACTTCCAAACTTTATATGCCCCAGTACAGGGGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCCATTGGACTTCCAAACTTTATATGCCCCAGTACAGGGGAACA  650

seq1  TCAGGGCCAAAAAGTGGGAGTGGGTGGGAGGGTATGG  687
      |||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCAAAAAGTGGGAGTGGGTGGGAGGGTATGG  687