BAC Information

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BAC

Clone NameB6Ng01-045J15
Chromosome13 (Build37)
Map Location 68,886,294 - 68,887,446
singlet/doubletsinglet
Overlap geneAdcy2
Upstream geneLOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik
Downstream geneLOC666205, LOC218332, Pols, A530095I07Rik, Srd5a1, Nsun2, LOC100042260, 3110006E14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045J15.bB6Ng01-045J15.g
ACCDH871009DH871010
length1,1241,216
definitionDH871009|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J15, 5' end.DH871010|Mus musculus domesticus DNA, BAC clone: B6Ng01-045J15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattcagcaaatactgtctctctatcatgtcaggctctgggatct
gtgtttgatgctggacacacaatattgaaaatacacagtacctcagttag
ggttttactactgtgaacagacaccatgaccaaggcaacacttataagga
caacatttaattggggctggcttacaggttcagaggttcagtccattatc
accaaggctagcgcatggtagcatccaggcaggcatggtgaagaaggagc
tgacagttctacatcttcatctgaaggctgcaaacagaatactcacttgc
agtcagctaggatgagggtcttaaagcccacacccacagtgacacaccta
ctcgaatagagccatgccttctaatagtgccactctctgggccaagcata
tacaaaccatcacacagtctgaacaaatatgtaccagatataaatatata
attctagtgggatttaatgaccactgcaagggggaacatggggtcccaaa
gcagtttgggcatggaaaaatgtggaatgagggagtaaaggtattataag
cttgtctgaaaatttgttttaaaatagccttaactaaggaaggtgggtag
gaacaacatgaagggatcagtcatccaggacccaggggaagaatgttctc
tgcagtagaacgtactccataaggtctgaaaggaggaaaaggggaggtga
ggcacatacagaacaccgtgtcttagaatatactgggcatgtgcactttc
caggcattggaagcatccagagctggtgcccagctgggctcagctcacag
tctaccaggtgattgtttttctttggacctgaatctctgatcagtgctaa
tgttactgggttgtaacttctctcgttttagttgtcagaggatgcagaag
acatcaggttttcttagtctcctgaagaaataattcaagagtggattcaa
aagaaaagtcaaagacaatttattagcactaaaagaaacctcaggcagca
gctgtaaagcctcagcggtgcggagaagaataaaagcccactcattagct
gccatgaagttcagacactgtgatgagtagacagccaaggtggggagaac
acaactgctaggaacatctgggaa
gaattcaaggcccatacctagacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttcaccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaggaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaatattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aatgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgccggacctaaagctttactacagagcaattgtggtaaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ctaaaccatccagtggaagaaagacagcatttcaacaaatgttgctgcac
actggtgtatcatgtagaagaatgcgaatcgatccatacttatctcctgt
actaagtcaatctaatggatcaagacttccaataaacagagacctaacta
aagaagagaaagtgggaagctgaagatattggtccaggaaaatctgacga
acgcaatgcttgtgctgtagatcggattgcaattggactatgaatccaag
ttcgcagcagaccggtctataagcaagaaaccaagattggtaggactttc
ttcaattccgattggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68886294_68887446
seq2: B6Ng01-045J15.b_45_1168 (reverse)

seq1  TTCCCAGAATGCTTTCCTCAGCAGTTTGTGTTCTCCCAACCCTTTGGGCT  50
      ||||||| |||  ||||| ||||| |||||||||||| |||   | ||||
seq2  TTCCCAG-ATG--TTCCT-AGCAG-TTGTGTTCTCCCCACC---TTGGCT  42

seq1  GTCTTACTCATCTACCATGTGTCTGACCTTCATGGCAGCTTAAATGGCGT  100
      ||| |||||||| ||   |||||||| |||||||||||||  ||||    
seq2  GTC-TACTCATC-AC--AGTGTCTGAACTTCATGGCAGCT--AATGAGTG  86

seq1  GGCTTTTTAATTCTTTCCTCCGCACCGCTGAGGCTTTTACAGCTTGCCTG  150
      |||||||  ||||||  ||||||||||||||||| |||||||||   |||
seq2  GGCTTTT--ATTCTT--CTCCGCACCGCTGAGGC-TTTACAGCT--GCTG  129

seq1  CCCTGAGGTTTTTCTTTTAAGTGCTAATAAAATTGTCTTTGACTTTTTCT  200
       |||||||  |||||||| ||||||||| |||||||||||||| ||||||
seq2  -CCTGAGG--TTTCTTTT-AGTGCTAAT-AAATTGTCTTTGAC-TTTTCT  173

seq1  TTTGAATCCACTCTTGAATTATTTTCTTCAGGAGACTAAGAAAACCCTGA  250
      ||||||||||||||||||||| |||||||||||||||||||||| |||||
seq2  TTTGAATCCACTCTTGAATTA-TTTCTTCAGGAGACTAAGAAAA-CCTGA  221

seq1  TGTCTTCTGCATCCTCTGACAACTAAAACGGGAGAAGTTACAACCCAGTA  300
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TGTCTTCTGCATCCTCTGACAACTAAAACGAGAGAAGTTACAACCCAGTA  271

seq1  ACATTAGCACTGATCAGAGATTCAGGTCCAAAGAAAAACAATCACCTGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGCACTGATCAGAGATTCAGGTCCAAAGAAAAACAATCACCTGGT  321

seq1  AGACTGTGAGCTGAGCCCAGCTGGGCACCAGCTCTGGATGCTTCCAATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGAGCTGAGCCCAGCTGGGCACCAGCTCTGGATGCTTCCAATGC  371

seq1  CTGGAAAGTGCACATGCCCAGTATATTCTAAGACACGGTGTTCTGTATGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAAGTGCACATGCCCAGTATATTCTAAGACACGGTGTTCTGTATGT  421

seq1  GCCTCACCTCCCCTTTTCCTCCTTTCAGACCTTATGGAGTACGTTCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCACCTCCCCTTTTCCTCCTTTCAGACCTTATGGAGTACGTTCTACT  471

seq1  GCAGAGAACATTCTTCCCCTGGGTCCTGGATGACTGATCCCTTCATGTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAACATTCTTCCCCTGGGTCCTGGATGACTGATCCCTTCATGTTG  521

seq1  TTCCTACCCACCTTCCTTAGTTAAGGCTATTTTAAAACAAATTTTCAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCCACCTTCCTTAGTTAAGGCTATTTTAAAACAAATTTTCAGAC  571

seq1  AAGCTTATAATACCTTTACTCCCTCATTCCACATTTTTCCATGCCCAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTATAATACCTTTACTCCCTCATTCCACATTTTTCCATGCCCAAAC  621

seq1  TGCTTTGGGACCCCATGTTCCCCCTTGCAGTGGTCATTAAATCCCACTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGGGACCCCATGTTCCCCCTTGCAGTGGTCATTAAATCCCACTAG  671

seq1  AATTATATATTTATATCTGGTACATATTTGTTCAGACTGTGTGATGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATATTTATATCTGGTACATATTTGTTCAGACTGTGTGATGGTTT  721

seq1  GTATATGCTTGGCCCAGAGAGTGGCACTATTAGAAGGCATGGCTCTATTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATGCTTGGCCCAGAGAGTGGCACTATTAGAAGGCATGGCTCTATTC  771

seq1  GAGTAGGTGTGTCACTGTGGGTGTGGGCTTTAAGACCCTCATCCTAGCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGTGTGTCACTGTGGGTGTGGGCTTTAAGACCCTCATCCTAGCTG  821

seq1  ACTGCAAGTGAGTATTCTGTTTGCAGCCTTCAGATGAAGATGTAGAACTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAGTGAGTATTCTGTTTGCAGCCTTCAGATGAAGATGTAGAACTG  871

seq1  TCAGCTCCTTCTTCACCATGCCTGCCTGGATGCTACCATGCGCTAGCCTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTTCTTCACCATGCCTGCCTGGATGCTACCATGCGCTAGCCTT  921

seq1  GGTGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAATGGACTGAACCTCTGAACCTGTAAGCCAGCCCCAATTAAATG  971

seq1  TTGTCCTTATAAGTGTTGCCTTGGTCATGGTGTCTGTTCACAGTAGTAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTTATAAGTGTTGCCTTGGTCATGGTGTCTGTTCACAGTAGTAAA  1021

seq1  ACCCTAACTGAGGTACTGTGTATTTTCAATATTGTGTGTCCAGCATCAAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAACTGAGGTACTGTGTATTTTCAATATTGTGTGTCCAGCATCAAA  1071

seq1  CACAGATCCCAGAGCCTGACATGATAGAGAGACAGTATTTGCTGAATGAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATCCCAGAGCCTGACATGATAGAGAGACAGTATTTGCTGAATGAA  1121

seq1  TTC  1153
      |||
seq2  TTC  1124