BAC Information

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BAC

Clone NameB6Ng01-046A20
Chromosome13 (Build37)
Map Location 68,286,159 - 68,287,254
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137, Zfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222
Downstream geneAA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2, LOC666205
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046A20.bB6Ng01-046A20.g
ACCDH871331DH871332
length1,2051,073
definitionDH871331|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A20, 5' end.DH871332|Mus musculus domesticus DNA, BAC clone: B6Ng01-046A20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagtaatgtgcttgatctgtaattgtgcacaaaactgtttgaac
ttaagactgctatatcgaggaccgttgtctgttttgataattttgggctg
tcccatgacagaaaaggcatacaatgaatgatttaaaacatctttggtag
cttctccagtgtgggcggaggcacacaaaaacccactgaaggtatcgatg
gacacatgcacaacttaagcttcccaaaagatgagatgttacatccattt
gccagagttctccagggacaaggccccatgggttaactcctaaatgggat
tctggcaacaggataagacaatttttacactttttaacgatttgtctggc
ttgttccctggttatgttgaatcgtagtctgagtgtctgtgcattgagat
gatgtaaagtatgggctgtctgagcctgtgacagtgcgtcaggctcgata
gtaaggcatgtaagccgagtggcctgatcagcaagatcatttccctggga
caagggtccaggaagtcctgtgtgggctcgaatatgccctacaaaaaaac
gggtaggctcaacttcttatgagcatttgtattttaagaaacatctgaaa
agtggcagtgctgggttgaatactagggaccacctctaaagctctcaaag
cccttaccacataatggctatctgaatacaagttaaagggagatgagacc
gattcaaacacttgtaaagctcctaggagctccaccagctgggccgaggt
ataggtgttctcaatgatttggcattgtcctttgacaacgatagcagccc
ttccattactggaaccatcaatgaacacagttaacgctttggatgtaggc
tgcagctgggtaccttggggagacaaaaggtagtttgcaaaaatgaccac
ctatggtaatgtgtatcaaagttccttgaaagagatataatatagtcact
catcaatgtgactgtacagaagctgctcagagatagtaaataacagtatc
aggcttgtcaaatgatgggcctagataatcactgactataagagtattgc
gaaccttgaagtgtggctgcaatgatccgaaggataatcttcttgtccca
ttagcattgggtcaaaggtgaactcaacggcttgaagggtatatagcact
gtgttatatggcactcttgagcctaagcctgaaaatccggatggtcagat
actcc
gaattccaactgtaatttcaagaataatgtcccaccctcctgacctttcg
tgacttctgggattgaactctggtcctcctgttttagccactgtgctatt
tcctcagcctttcccctgctttcacaggactctcattccttccataattt
atagcccctatatccagaaccttttatgttctacttctcaaaggattgaa
ttctgatcttctactgtttggagcctctgagactgtcttggtgacatggg
atgaggggtgtgatgaggacagacttgcttcctgtacagacattcaacta
accccttcactgaagccccactcttccttcctgggcatttctgtgaccct
gtggccacttgctgctttgtcttccactgagtgaattgaatgtatgcagt
tacaggcctctaagctgattatcacctgctccctgtttgttctttcactt
ccaacatatgtgggtgccccctagtcagatactctcttaattttttaaaa
taaaaaaatttatgatgccattatcttacttctcctctttcatttccttc
ctgcaatccaccccatgtccttttaggccagtcatttccctcttccccca
ctttctctctacttggtttccctattttttgacaattacacacacacaca
cacacacacaaatatatatatatatatatatacatatatatatatgtata
tatatacatatatatatacatatatatactcattaacatattagtacaac
ccaatgagactatttagtgttgcttttatgtgtatgatttcagggctgcc
cacatgacattagataacaattaggaaggtcatctctggagagactaatt
ctctctttctctgactcaagaaggaatcagatttgtaagactgaagccag
tgccaaatacagaatctgacccagacacagctggagcatcactgagacat
cacatcatgactctgacagacacacacaaagtgagactgggtaagttgct
ttcacaggagaagtgcagtgtcactgagtcaggttctcgagtagataagg
gtatttaccatcatcattctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_68286159_68287254
seq2: B6Ng01-046A20.g_67_1139

seq1  GAATTCCAACTGTAATTTCAAGAATAATGTCCCACCCTCCTGACCTTTCG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAACTGTAATTTCAAGAATAATGTCCCACCCTCCTGACCTTTCG  50

seq1  TGACTTCTGGGATTGAACTCTGGTCCTCCTGTTTTAGCCACTGTGCTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTGGGATTGAACTCTGGTCCTCCTGTTTTAGCCACTGTGCTATT  100

seq1  TCCTCAGCCTTTCCCCTGCTTTCACAGGACTCTCATTCCTTCCATAATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGCCTTTCCCCTGCTTTCACAGGACTCTCATTCCTTCCATAATTT  150

seq1  ATAGCCCCTATATCCAGAACCTTTTATGTTCTACTTCTCAAAGGATTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCCCTATATCCAGAACCTTTTATGTTCTACTTCTCAAAGGATTGAA  200

seq1  TTCTGATCTTCTACTGTTTGGAGCCTCTGAGACTGTCTTGGTGACATGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCTTCTACTGTTTGGAGCCTCTGAGACTGTCTTGGTGACATGGG  250

seq1  ATGAGGGGTGTGATGAGGACAGACTTGCTTCCTGTACAGACATTCAACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGTGTGATGAGGACAGACTTGCTTCCTGTACAGACATTCAACTA  300

seq1  ACCCCTTCACTGAAGCCCCACTCTTCCTTCCTGGGCATTTCTGTGACCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTTCACTGAAGCCCCACTCTTCCTTCCTGGGCATTTCTGTGACCCT  350

seq1  GTGGCCACTTGCTGCTTTGTCTTCCACTGAGTGAATTGAATGTATGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCACTTGCTGCTTTGTCTTCCACTGAGTGAATTGAATGTATGCAGT  400

seq1  TACAGGCCTCTAAGCTGATTATCACCTGCTCCCTGTTTGTTCTTTCACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGCCTCTAAGCTGATTATCACCTGCTCCCTGTTTGTTCTTTCACTT  450

seq1  CCAACATATGTGGGTGCCCCCTAGTCAGATACTCTCTTAATTTTTTAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATATGTGGGTGCCCCCTAGTCAGATACTCTCTTAATTTTTTAAAA  500

seq1  TAAAAAAATTTATGATGCCATTATCTTACTTCTCCTCTTTCATTTCCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAATTTATGATGCCATTATCTTACTTCTCCTCTTTCATTTCCTTC  550

seq1  CTGCAATCCACCCCATGTCCTTTTAGGCCAGTCATTTCCCTCTTCCCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAATCCACCCCATGTCCTTTTAGGCCAGTCATTTCCCTCTTCCCCCA  600

seq1  CTTTCTCTCTACTTGGTTTCCCTATTTTTTGACAATTACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTACTTGGTTTCCCTATTTTTTGACAATTACACACACACACA  650

seq1  CACACACACAAATATATATATATATATATATACATATATATATATGTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACAAATATATATATATATATATATACATATATATATATGTATA  700

seq1  TATATACATATATATATACATATATATACTCATTAACATATTAGTACAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACATATATATATACATATATATACTCATTAACATATTAGTACAAC  750

seq1  CCAATGAGACTATTTAGTGTTGCTTTTATGTGTATGATTTCAGGGCTGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGAGACTATTTAGTGTTGCTTTTATGTGTATGATTTCAGGGCTGCC  800

seq1  CACATGACATTAGATAACAATTAGGAAGGTCATCTCTGGAGAGACTAATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGACATTAGATAACAATTAGGAAGGTCATCTCTGGAGAGACTAATT  850

seq1  CTCTCTTTCTCTGACTCAAGAAGGAATCAGATTTGTAAGAACTGAAGCCA  900
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTCTCTTTCTCTGACTCAAGAAGGAATCAGATTTGTAAG-ACTGAAGCCA  899

seq1  GTGCCAAATAACAGAAATCTGACCCAAGACAACAAGCCTGGAGGCCATCA  950
      ||||||||| |||| |||||||||| |||| |||   ||||||  |||||
seq2  GTGCCAAAT-ACAG-AATCTGACCC-AGAC-ACA--GCTGGAG--CATCA  941

seq1  CTGAGACATCAACACCATGACTCTGACAGGGACACACACAAAAGTGAAGA  1000
      |||||||||| ||| |||||||||||||  ||||||||| |||||||   
seq2  CTGAGACATC-ACATCATGACTCTGACA--GACACACAC-AAAGTGA--G  985

seq1  ACTGGGTTAAGGTTGCTTTCACAGGAAGAGTGCAGTGTCAACTGAGTTCA  1050
      |||||||  | |||||||||||||||  ||||||||||| |||||||   
seq2  ACTGGGT--AAGTTGCTTTCACAGGAGAAGTGCAGTGTC-ACTGAGT--C  1030

seq1  AGGGTCTCGAGTAGATAAGGGTAATTTTTACAATCATCATTCTATG  1096
      ||| |||||||||||||||||||   ||||| ||||||||||||||
seq2  AGGTTCTCGAGTAGATAAGGGTA---TTTACCATCATCATTCTATG  1073