BAC Information

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BAC

Clone NameB6Ng01-046M03
Chromosome13 (Build37)
Map Location 79,616,063 - 79,617,142
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666883
Downstream geneLOC666925, LOC382780, EG666933
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046M03.bB6Ng01-046M03.g
ACCDH871824DH871825
length1,0781,129
definitionDH871824|Mus musculus domesticus DNA, BAC clone: B6Ng01-046M03, 5' end.DH871825|Mus musculus domesticus DNA, BAC clone: B6Ng01-046M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggcaggatcagtcccagttccagatgaaggtgtagactggaa
gaactgtgttcctggttatggcagatttcctgtttcccaggttacagcag
acctcatggttgacaggcaggctatgggttgagtgggccctctgatccct
ccctctgtcccaggtggaggaataaaccagaaggaagatggagcattggt
aaagttgataggttccttgtcagctgggctctgtgggtgttccagctggc
atgggtttggagcaggagtctcacctgtgtccttggttaccacagacctc
ctgggcaaaaggcatactgttgaataagtgagggaattgtgctcaccaat
ctggcttgggtggaagagctgactggaagcccatttcttctagtttaatt
taggctcaccacaacagggtgagtttagtttcagtgactttaatatcatt
agaagtgaaagttccttgtatggttctttattgttttatttgttggtatt
tcacagatgttattttataatttaaataagttactaacatgcattatact
ggataaattttgattattttaggatttaaattgagaatttcatgttctgt
ctctttttttttagaatatttttattaggtattttcttcatttacatttc
aaatgctatcccaagagtccccagacccccccccttccctactgacccac
tcccacttcttggccctggcgttcccccttactgaggcatataaagtttg
caagatcaaggggcctctcctctcaatggtggccgactaggccatcatat
tcagctagagacaccaggtcccggggtactggttagttcatattgtgttc
cacctatatggtttcagacccctttagctccttgggtgctttctctagct
cctccattgggggtcctgtggtacatccaatagctgactgtggggcatcc
acttcagtatttggcagtccctgcataagcctcacaagagccagctatat
tcaggtccttttagcaaatttgctgggggtatgcaatggtgtcagcattg
aaggctgaatatgggatggatccctggg
gaattctgcactaaacccttctggtcctgggcttttattggttaagagac
ttttcgtgactgcttctattcctgtaggggttatggagctgtttagatgg
tttatccaatcctggtttaactttggtatttggaatttttctagaaaatt
gtccatttcatccagattttccaattttgttgaatatagacttgtagtaa
gatctgatttttttttaaatttcctcagtttcttttattatatatccctt
atcatttctcttttttgttcatttgattttctcaaagaaccacctcctgg
ttttgttgattatttttatagttctttttgtttctatttggctcatttca
tccctgagtttgtttttttcctgacatgtattcctcttgggtgtatttgc
ttcattttgtgctagagctttcaggtatgctattaagctgctggtgtatg
ctctctcctgtttccttttggaggcacttagagttatgagttttcatctc
agcactgctttcattgtgtccctaagattgggcatgtggcttaattttca
ttaaattctaaaaagtccttaatttctttctttatttcatccttgaccaa
attaacattgagtaggtcattgtttcagcttccatgtgtattttggcttt
cctttgtttttgttgttattagagaccagccactgtccctggtgatctga
taggatgtattagactatttctatcatcttctatttgttgagtcctgttt
tgtgatcaattatatagtccattttgaaaacgtaccatgaggtctctgaa
aaagaggttatttccttttcctttaggatgaaatgttatataaaatatct
gttaaattccattggaccataacttctgtaaatttcactttgtctttatt
tagtttgtgttctttgatcagtactttgatgaaagtgggtgttgaaattc
tcccactattactgtgttgagataagtgctttgagctttagtaagtttct
tttaggaatggagtgcctttgcatttgagacatgagtgcagagtgaagtc
tactgggaagatttcccttgtcgagcgaagtgctatcctactttgattaa
cattactgagagtgattattataggtaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_79616063_79617142
seq2: B6Ng01-046M03.b_41_1118

seq1  GAATTCTGGGCAGGATCAGTCCCAGTTCCAGATGAAGGTGTAGACTGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCAGGATCAGTCCCAGTTCCAGATGAAGGTGTAGACTGGAA  50

seq1  GAACTGTGTTCCTGGTTATGGCAGATTTCCTGTTTCCCAGGTTACAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGTGTTCCTGGTTATGGCAGATTTCCTGTTTCCCAGGTTACAGCAG  100

seq1  ACCTCATGGTTGACAGGCAGGCTATGGGTTGAGTGGGCCCTCTGATCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATGGTTGACAGGCAGGCTATGGGTTGAGTGGGCCCTCTGATCCCT  150

seq1  CCCTCTGTCCCAGGTGGAGGAATAAACCAGAAGGAAGATGGAGCATTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTGTCCCAGGTGGAGGAATAAACCAGAAGGAAGATGGAGCATTGGT  200

seq1  AAAGTTGATAGGTTCCTTGTCAGCTGGGCTCTGTGGGTGTTCCAGCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGATAGGTTCCTTGTCAGCTGGGCTCTGTGGGTGTTCCAGCTGGC  250

seq1  ATGGGTTTGGAGCAGGAGTCTCACCTGTGTCCTTGGTTACCACAGACCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTTGGAGCAGGAGTCTCACCTGTGTCCTTGGTTACCACAGACCTC  300

seq1  CTGGGCAAAAGGCATACTGTTGAATAAGTGAGGGAATTGTGCTCACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAAAGGCATACTGTTGAATAAGTGAGGGAATTGTGCTCACCAAT  350

seq1  CTGGCTTGGGTGGAAGAGCTGACTGGAAGCCCATTTCTTCTAGTTTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTTGGGTGGAAGAGCTGACTGGAAGCCCATTTCTTCTAGTTTAATT  400

seq1  TAGGCTCACCACAACAGGGTGAGTTTAGTTTCAGTGACTTTAATATCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCACCACAACAGGGTGAGTTTAGTTTCAGTGACTTTAATATCATT  450

seq1  AGAAGTGAAAGTTCCTTGTATGGTTCTTTATTGTTTTATTTGTTGGTATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTGAAAGTTCCTTGTATGGTTCTTTATTGTTTTATTTGTTGGTATT  500

seq1  TCACAGATGTTATTTTATAATTTAAATAAGTTACTAACATGCATTATACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATGTTATTTTATAATTTAAATAAGTTACTAACATGCATTATACT  550

seq1  GGATAAATTTTGATTATTTTAGGATTTAAATTGAGAATTTCATGTTCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAATTTTGATTATTTTAGGATTTAAATTGAGAATTTCATGTTCTGT  600

seq1  CTCTTTTTTTTTAGAATATTTTTATTAGGTATTTTCTTCATTTACATTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTTTTTTTAGAATATTTTTATTAGGTATTTTCTTCATTTACATTTC  650

seq1  AAATGCTATCCCAAGAGTCCCCAGACCCCCCCCCTTCCCTACTGACCCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTATCCCAAGAGTCCCCAGACCCCCCCCCTTCCCTACTGACCCAC  700

seq1  TCCCACTTCTTGGCCCTGGCGTTCCCCCTTACTGAGGCATATAAAGTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACTTCTTGGCCCTGGCGTTCCCCCTTACTGAGGCATATAAAGTTTG  750

seq1  CAAGATCAAGGGGCCTCTCCTCTCAATGGTGGCCGACTAGGCCATCATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATCAAGGGGCCTCTCCTCTCAATGGTGGCCGACTAGGCCATCATAT  800

seq1  TCAGCTAGAGACACCAGGTCCGGGGGTACTGGTTAGTTCATATTGTTGTT  850
      ||||||||||||||||||||| ||||||||||||||||||||||| ||||
seq2  TCAGCTAGAGACACCAGGTCCCGGGGTACTGGTTAGTTCATATTG-TGTT  849

seq1  CCACCTATATGGTTTCAGACCCCTTTAGCTCCTTGGGTGCTTTCTCTAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTATATGGTTTCAGACCCCTTTAGCTCCTTGGGTGCTTTCTCTAGC  899

seq1  TCCTCCATTGGGGGTCCTGTGTTACATCCAATAGCTGACTGT-GAGCATC  949
      ||||||||||||||||||||| |||||||||||||||||||| | |||||
seq2  TCCTCCATTGGGGGTCCTGTGGTACATCCAATAGCTGACTGTGGGGCATC  949

seq1  CACTTCAGTATTTGCCAGTCCCCTGCAT-AGCCTCACAAGAGCCAGCTAT  998
      |||||||||||||| |||| |||||||| |||||||||||||||||||||
seq2  CACTTCAGTATTTGGCAGT-CCCTGCATAAGCCTCACAAGAGCCAGCTAT  998

seq1  ATCAGGGTCCTTTTAGCAAAATCTTGCT-GGTGTATGCAATGGTGTCAGC  1047
      ||   |||||||||||||||   ||||| || ||||||||||||||||||
seq2  ATTCAGGTCCTTTTAGCAAA--TTTGCTGGGGGTATGCAATGGTGTCAGC  1046

seq1  ATTTGGAGGCTGATTATGGGATGGATCCCTGGG  1080
      | ||| ||||||| |||||||||||||||||||
seq2  A-TTGAAGGCTGAATATGGGATGGATCCCTGGG  1078