BAC Information

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BAC

Clone NameB6Ng01-047B14
Chromosome13 (Build37)
Map Location 96,276,069 - 96,430,080
singlet/doubletdoublet
Overlap geneF2rl1, F2r, Iqgap2
Upstream geneAp3b1, Tbca, Otp, Wdr41, Pde8b, Zbed3, Aggf1, Crhbp, S100z
Downstream geneF2rl2, Sv2c, LOC667582, 1200014M14Rik, 9330128J19Rik, Polk, Col4a3bp, Hmgcr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047B14.bB6Ng01-047B14.g
ACCDH872054DH872055
length1,078665
definitionDH872054|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B14, 5' end.DH872055|Mus musculus domesticus DNA, BAC clone: B6Ng01-047B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,428,980 - 96,430,080)(96,276,069 - 96,276,733)
sequence
gaattcaggtgagaaggtccattcttataaagaacgtgggaggacagaca
agaatgatagtctgtccgcagaaccgagcccactgaggaaggcagatgcc
ccacgaggctgtatccccagcaactgccctggataatgaaggaaaggaac
agacaagatgttcccagccaggcctgttgttcccacctcaccccctccat
cccgctacactgagtccttcctgctttaggatctgtgcttctgataaaac
attctccctaatgtgggacacactcatagtatttagaataagacactcaa
aataactgagttttgttttgttgaacttaaggtagctttactcccccccc
ccatcgttttccaactgggaagaatttgctttctctgcaacaatggtagg
aaatgatgtgattcctttgggaaggctggggatccccagcatttgtattt
ataggtgatcctgtgtgaatacgcctgccccgtcctgaagcccttctcca
ttacgcacataggagttaattctattgcctctgtttcgctctcctaatcc
tgtcactaatgattccatgagaacagagaaaggagagagccactgctgac
ggtcacttatgcatctggacgctctgaacagatacttccatcttggcttg
tgtttgctttcttatctgcagcagcttatagaacttatgtgacatcactg
tgacctctgtcctcctcacttgaacagggacttcccattcctctgggatc
acagtttatcttctgattcccatccctgagtggcgtctataccgtttatg
agaaggatgcctcgaatctctctcagtggggacgagaaggatgcctcgaa
tcttctcccagtggggacgtttccattttcttcagagccaattttagttc
tcttcactaagagaacaatgttgcagtgtctcacagccctcaatgctctt
agctcctttcctctcgtgttgttgagacaagactcctatgtagcctggct
agccagcactcacgctgtagatcaagctgatctcgaactcataagcctgc
tgcctgtctccgaggctctttttcttgt
gaattctaggcaagtcagaactacgtggagactgtttcaaaagaaaaata
ttataaaaccaaaacctaaactgaacaaaacatgcaatccataagaaatt
tgtaattacatggtatctctccctgtttttttgttgttttgttttgggtt
ggtttttgtttgtttgttttgttttatatatgatgtgtatgcctgcttgt
ctgagtgtgtaccatatttgtccagtgcccacggtggtcagaagagaaca
ctagatcacctgaggctggagttatatgtagttgtgagccacctgatata
ggtgctgggagcctaacccaggtcctctataatagcagaagtgttcttgc
tagctctccaaacccccactccacttgtcttcttgttttcttgttgttgt
tgttgttgtaagatagagtctatgtagcccaggctggccccacactcata
cagatccccctgcctctgcgtcctaagtgctgggattaaaggcgcgcgcc
atgacaccacgctctttgttgttgtcttggttctctaaccctttggagca
cgatgttttaagtgcttttgagcagcctaaactctagaaagccgaatttt
tcttttcaactatgtgcatgcttgtctcttcatgagctttatgtgccgtg
tgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_96428980_96430080
seq2: B6Ng01-047B14.b_45_1122 (reverse)

seq1  ACAAGGAAAAAGGAGCACTCGGGAGACAGAGGCAGGCAGAGCTTTATGAG  50
      |||||  |||| |||| ||| ||||||  ||||| |||| || |||||||
seq2  ACAAG--AAAAAGAGC-CTC-GGAGAC--AGGCA-GCAG-GC-TTATGAG  41

seq1  TTCGAGATCAGCCTGATCTACAGCGTGAGTGCTGGGCTAGCCAGGGCTAC  100
      |||||||||||| |||||||||||||||||||| ||||||||| ||||||
seq2  TTCGAGATCAGCTTGATCTACAGCGTGAGTGCT-GGCTAGCCA-GGCTAC  89

seq1  ATAGGGAGGTCTTGTCTCAAACAAACACGAGAAGGAAAGGGAGCTAAGAG  150
      |||||   ||||||||||||   |||||||| |||||| |||||||||||
seq2  ATAGG--AGTCTTGTCTCAA--CAACACGAG-AGGAAA-GGAGCTAAGAG  133

seq1  CATTGAGGGCTTGTGAGGAACACCTGCAACATTGTTTCTCCTTAGTGAAG  200
      |||||||||| ||||||  ||| ||||||||||| |||| ||||||||||
seq2  CATTGAGGGC-TGTGAG--ACA-CTGCAACATTG-TTCT-CTTAGTGAAG  177

seq1  AGAACTAAAATTGGCTCTGAAG-AAATGGAAACGTCCCCACTGGGAGAGG  249
      |||||||||||||||||||||| ||||||||||||||||||||||||| |
seq2  AGAACTAAAATTGGCTCTGAAGAAAATGGAAACGTCCCCACTGGGAGAAG  227

seq1  ATTCGAGGCATCCTTCTCGTCCCCACTGGGAGAGGATTCGAGGCATCCTT  299
      |||||||||||||||||||||||||||| |||| ||||||||||||||||
seq2  ATTCGAGGCATCCTTCTCGTCCCCACTGAGAGA-GATTCGAGGCATCCTT  276

seq1  CTCATAAACGGTATAGACGCCACTCAGGGATGGGAATCAGAAGATAAACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATAAACGGTATAGACGCCACTCAGGGATGGGAATCAGAAGATAAACT  326

seq1  GTGATCCCAGAGGAATGGGAAGTCCCTGTTCAAGTGAGGAGGACAGAGGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCCCAGAGGAATGGGAAGTCCCTGTTCAAGTGAGGAGGACAGAGGT  376

seq1  CACAGTGATGTCACATAAGTTCTATAAGCTGCTGCAGATAAGAAAGCAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGATGTCACATAAGTTCTATAAGCTGCTGCAGATAAGAAAGCAAA  426

seq1  CACAAGCCAAGATGGAAGTATCTGTTCAGAGCGTCCAGATGCATAAGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGCCAAGATGGAAGTATCTGTTCAGAGCGTCCAGATGCATAAGTGA  476

seq1  CCGTCAGCAGTGGCTCTCTCCTTTCTCTGTTCTCATGGAATCATTAGTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCAGCAGTGGCTCTCTCCTTTCTCTGTTCTCATGGAATCATTAGTGA  526

seq1  CAGGATTAGGAGAGCGAAACAGAGGCAATAGAATTAACTCCTATGTGCGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTAGGAGAGCGAAACAGAGGCAATAGAATTAACTCCTATGTGCGT  576

seq1  AATGGAGAAGGGCTTCAGGACGGGGCAGGCGTATTCACACAGGATCACCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGAAGGGCTTCAGGACGGGGCAGGCGTATTCACACAGGATCACCT  626

seq1  ATAAATACAAATGCTGGGGATCCCCAGCCTTCCCAAAGGAATCACATCAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACAAATGCTGGGGATCCCCAGCCTTCCCAAAGGAATCACATCAT  676

seq1  TTCCTACCATTGTTGCAGAGAAAGCAAATTCTTCCCAGTTGGAAAACGAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACCATTGTTGCAGAGAAAGCAAATTCTTCCCAGTTGGAAAACGAT  726

seq1  GGGGGGGGGGAGTAAAGCTACCTTAAGTTCAACAAAACAAAACTCAGTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGAGTAAAGCTACCTTAAGTTCAACAAAACAAAACTCAGTTA  776

seq1  TTTTGAGTGTCTTATTCTAAATACTATGAGTGTGTCCCACATTAGGGAGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAGTGTCTTATTCTAAATACTATGAGTGTGTCCCACATTAGGGAGA  826

seq1  ATGTTTTATCAGAAGCACAGATCCTAAAGCAGGAAGGACTCAGTGTAGCG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTATCAGAAGCACAGATCCTAAAGCAGGAAGGACTCAGTGTAGCG  876

seq1  GGATGGAGGGGGTGAGGTGGGAACAACAGGCCTGGCTGGGAACATCTTGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGAGGGGGTGAGGTGGGAACAACAGGCCTGGCTGGGAACATCTTGT  926

seq1  CTGTTCCTTTCCTTCATTATCCAGGGCAGTTGCTGGGGATACAGCCTCGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTTTCCTTCATTATCCAGGGCAGTTGCTGGGGATACAGCCTCGT  976

seq1  GGGGCATCTGCCTTCCTCAGTGGGCTCGGTTCTGCGGACAGACTATCATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCATCTGCCTTCCTCAGTGGGCTCGGTTCTGCGGACAGACTATCATT  1026

seq1  CTTGTCTGTCCTCCCACGTTCTTTATAAGAATGGACCTTCTCACCTGAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTCTGTCCTCCCACGTTCTTTATAAGAATGGACCTTCTCACCTGAAT  1076

seq1  TC  1101
      ||
seq2  TC  1078

seq1: chr13_96276069_96276733
seq2: B6Ng01-047B14.g_69_733

seq1  GAATTCTAGGCAAGTCAGAACTACGTGGAGACTGTTTCAAAAGAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGCAAGTCAGAACTACGTGGAGACTGTTTCAAAAGAAAAATA  50

seq1  TTATAAAACCAAAACCTAAACTGAACAAAACATGCAATCCATAAGAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAACCAAAACCTAAACTGAACAAAACATGCAATCCATAAGAAATT  100

seq1  TGTAATTACATGGTATCTCTCCCTGTTTTTTTGTTGTTTTGTTTTGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTACATGGTATCTCTCCCTGTTTTTTTGTTGTTTTGTTTTGGGTT  150

seq1  GGTTTTTGTTTGTTTGTTTTGTTTTATATATGATGTGTATGCCTGCTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTGTTTGTTTGTTTTGTTTTATATATGATGTGTATGCCTGCTTGT  200

seq1  CTGAGTGTGTACCATATTTGTCCAGTGCCCACGGTGGTCAGAAGAGAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTGTGTACCATATTTGTCCAGTGCCCACGGTGGTCAGAAGAGAACA  250

seq1  CTAGATCACCTGAGGCTGGAGTTATATGTAGTTGTGAGCCACCTGATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATCACCTGAGGCTGGAGTTATATGTAGTTGTGAGCCACCTGATATA  300

seq1  GGTGCTGGGAGCCTAACCCAGGTCCTCTATAATAGCAGAAGTGTTCTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGGGAGCCTAACCCAGGTCCTCTATAATAGCAGAAGTGTTCTTGC  350

seq1  TAGCTCTCCAAACCCCCACTCCACTTGTCTTCTTGTTTTCTTGTTGTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTCCAAACCCCCACTCCACTTGTCTTCTTGTTTTCTTGTTGTTGT  400

seq1  TGTTGTTGTAAGATAGAGTCTATGTAGCCCAGGCTGGCCCCACACTCATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTTGTAAGATAGAGTCTATGTAGCCCAGGCTGGCCCCACACTCATA  450

seq1  CAGATCCCCCTGCCTCTGCGTCCTAAGTGCTGGGATTAAAGGCGCGCGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCCCCTGCCTCTGCGTCCTAAGTGCTGGGATTAAAGGCGCGCGCC  500

seq1  ATGACACCACGCTCTTTGTTGTTGTCTTGGTTCTCTAACCCTTTGGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACACCACGCTCTTTGTTGTTGTCTTGGTTCTCTAACCCTTTGGAGCA  550

seq1  CGATGTTTTAAGTGCTTTTGAGCAGCCTAAACTCTAGAAAGCCGAATTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGTTTTAAGTGCTTTTGAGCAGCCTAAACTCTAGAAAGCCGAATTTT  600

seq1  TCTTTTCAACTATGTGCATGCTTGTCTCTTCATGAGCTTTATGTGCCGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTCAACTATGTGCATGCTTGTCTCTTCATGAGCTTTATGTGCCGTG  650

seq1  TGTGTGTGTGTGTGT  665
      |||||||||||||||
seq2  TGTGTGTGTGTGTGT  665