BAC Information

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BAC

Clone NameB6Ng01-048O10
Chromosome13 (Build37)
Map Location 67,809,371 - 67,810,219
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666027, LOC100042492, LOC100041947, EG382769, LOC666052, EG432768, LOC666061, Uqcrb, Mterfd1, Ptdss1, Zfp712, Zfp708, Zfp759, Rsl1, LOC674699, Zfp455, Zfp458, Zfp457, A230042K10Rik, E130120F12Rik, Zfp456, 2810487A22Rik, Zfp459, C330011K17Rik, LOC666098, 9630025I21Rik, Zfp817, Zfp87, Zfp748, A530054K11Rik, LOC328277, 3830402I07Rik, EG666137
Downstream geneZfp85-rs1, LOC674597, Zfp273, BC048507, LOC666185, LOC100042687, LOC100042692, LOC674779, LOC677603, LOC100042124, LOC666222, AA414992, LOC666238, EG666245, EG666272, LOC100042223, Mtrr, LOC100042233, Fastkd3, 1700001L19Rik, Adcy2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048O10.bB6Ng01-048O10.g
ACCDH873322DH873323
length1,195984
definitionDH873322|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O10, 5' end.DH873323|Mus musculus domesticus DNA, BAC clone: B6Ng01-048O10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtcccaatggatacactataaaataactctcattcctaaggct
atcattatggaggaggcagcagaaagattgtggatcctttcttaggaata
tcagatgctacagtacaaggcctcaagaagactgcttaaacatgtcctga
tcaaggacaccatcagacatgctgacatggataagaaaacactcatgaga
cctcaaccctacagaaagaacaataggtaactatgtgtcttagggtttct
attcctggacaaaacatcatgaccaagaagcaagttggggaggaaagtct
ttattcagcttatgcttccatactgctgttcatcaccaaaggatgtcagg
actggaactcaagcaggtcagaaagcaggagctgatgcagaggccatgga
gggatgttacttactggcttgctttccctggcttgctcagcctgctctct
tatagaacccaagactgccagcccagagatggtcccacccacaagacacc
ttttccccttgatcactaattgagaaaataccccacagctggatctcatg
gaggcacttccccaactgaagctcctttctctgcgataaccccaccctgt
gtaaaattgacacaaaaccagccagtacactatggaatgctgagagagga
aagaatagtcttcctcgggaatgagcacactaactggttatccaacacta
aatggccaaccctgaaaacatgtaagtacaaatagcacaatacagactta
gaaagttgtattgtgtatttaataacacatgcatgtatgtatttatgaaa
gagtggccatcactttgaaagagaacaaggaaggatatatgggaagcttt
gcaggagaaacacaaagttagaaacaatgtcattatatctcaaggataaa
aaatgttgcatatttagaggagcaagaaatatatccatttgaatagtgct
cactgtagtatgctatgagatggagacaagatcagagtcagacagctgtt
cacacatttagagtagagatgatcagtggtagagtactgactgctctcag
atactgagtctgtttcgcattacatagatcacacatcggacctagtcctg
gattaggctcttgctctgctgcatcgttatatacacaagtccatgcgaca
ctacctacgagtacttagaactaagcattgcatcatactcctgct
gaattctcttgtgtttagatagtgatgaaggaaaacagaaggccttccca
cataattcacacttgtatggtttctctcctgaatggattttcttatggtt
gtaaagtcttgatggataatggaagtccttgccacatacctcacacttgt
agggtttttctcctctatgaattattttgtgtttagaaagaaatgatgaa
ttgcggaaggccttgccacattcttcacacttgtatggcttctctcctgt
atgaattcgcttgtgtaccaaaagtaatgatggaaagtggaaggccattc
cacatacttcacacttgtatggtttctcttctgaatgaatctgtttatgt
ctggaaagttttgatggatattggaaggccttgccacatatatcacactt
gtagggtttctctactgtatgaattatcttgtgtttagaaagtaataatg
gaatgcagaaggccttgccacaaacttcacatttgtaaggtttccctcct
gtatgaattctgctctctttagaacttaatgatggactatggaaagactt
ggcacattcttcacacttgtagggattcattcgtaaatcaagcatctggt
gattttgaaacacttttttccactcaaagattttgccacactctgtgcac
gtatagcattttcctcctggtgaggaaagattgagaaattagtgaaggca
gagcaaaattccgtaaatttataatgcttctatttaataacaaacattta
ctcatatttgcatttgttttttataaatgataagctatattcaaatttct
aaacctgtaaccaatgaagcctaagttaaatcacagaatagtgaaatcat
gtcaccttccagtgaagagagcattagtatatagacatgaccaaaatata
tcaagatataatgtatcaacattatcactataacattatgtaatacatca
gcttctacgaatacagaatcatgactagataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_67809371_67810219
seq2: B6Ng01-048O10.g_238_1051

seq1  ATTATTTTGTGTTTAGAAAGAAATGATGAATTGCGGAAGGCCTTGCCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTGTGTTTAGAAAGAAATGATGAATTGCGGAAGGCCTTGCCACA  50

seq1  TTCTTCACACTTGTATGGCTTCTCTCCTGTATGAATTCGCTTGTGTACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCACACTTGTATGGCTTCTCTCCTGTATGAATTCGCTTGTGTACCA  100

seq1  AAAGTAATGATGGAAAGTGGAAGGCCATTCCACATACTTCACACTTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAATGATGGAAAGTGGAAGGCCATTCCACATACTTCACACTTGTAT  150

seq1  GGTTTCTCTTCTGAATGAATCTGTTTATGTCTGGAAAGTTTTGATGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTCTTCTGAATGAATCTGTTTATGTCTGGAAAGTTTTGATGGATA  200

seq1  TTGGAAGGCCTTGCCACATATATCACACTTGTAGGGTTTCTCTACTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAAGGCCTTGCCACATATATCACACTTGTAGGGTTTCTCTACTGTAT  250

seq1  GAATTATCTTGTGTTTAGAAAGTAATAATGGAATGCAGAAGGCCTTGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATCTTGTGTTTAGAAAGTAATAATGGAATGCAGAAGGCCTTGCCA  300

seq1  CAAACTTCACATTTGTAAGGTTTCCCTCCTGTATGAATTCTGCTCTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTCACATTTGTAAGGTTTCCCTCCTGTATGAATTCTGCTCTCTTT  350

seq1  AGAACTTAATGATGGACTATGGAAAGACTTGGCACATTCTTCACACTTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTAATGATGGACTATGGAAAGACTTGGCACATTCTTCACACTTGT  400

seq1  AGGGATTCATTCGTAAATCAAGCATCTGGTGATTTTGAAACACTTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTCATTCGTAAATCAAGCATCTGGTGATTTTGAAACACTTTTTTC  450

seq1  CACTCAAAGATTTTGCCACACTCTGTGCACGTATAGCATTTTCCTCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAAGATTTTGCCACACTCTGTGCACGTATAGCATTTTCCTCCTGG  500

seq1  TGAGGAAAGATTGAGAAATTAGTGAAGGCAGAGCAAAATTCCGTAAATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAGATTGAGAAATTAGTGAAGGCAGAGCAAAATTCCGTAAATTT  550

seq1  ATAATGCTTCTATTTAATAACAAACATTTACTCATATTTGCATTTGTTTT  600
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATAATGCTTCTATTTAATAACAAACATTTACTCATATTTGCATTTG-TTT  599

seq1  TTTATAAATGATAAGCTATATTCAAATTTCTAAACCTGTAACCAATGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATGATAAGCTATATTCAAATTTCTAAACCTGTAACCAATGAAG  649

seq1  CCTAAGTTAAATCACAGAATAAGTGAAAATCATGTCACCTTCCAGTGAAA  700
      |||||||||||||||||||| |||| ||||||||||||||||||||||| 
seq2  CCTAAGTTAAATCACAGAAT-AGTG-AAATCATGTCACCTTCCAGTGAA-  696

seq1  GAAGAGCATTAGTATATAGAACATGGAACCAAAAATATTAATCAAAAGAA  750
        ||||||||||||||||| |||||  ||| |||||||  ||||| |   
seq2  -GAGAGCATTAGTATATAG-ACATG--ACC-AAAATAT--ATCAAGA---  736

seq1  TATTAAAATGTAATCAAACATATATCAACTATTAAAACCAATTATGTAAA  800
         || ||||| ||| ||||| |||| |||||   |||  ||||||| ||
seq2  ---TATAATGT-ATC-AACAT-TATC-ACTAT---AAC--ATTATGT-AA  773

seq1  TACAAATCAGCTTCTTACCGAAATACAGAAAATTCATGACTAGATAAAA  849
      |||  ||||||||| |||   |||||||||   ||||||||||||||||
seq2  TAC--ATCAGCTTC-TAC--GAATACAGAA---TCATGACTAGATAAAA  814