BAC Information

Click to search

BAC

Clone NameB6Ng01-051J05
Chromosome13 (Build37)
Map Location 87,877,420 - 87,878,170
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC675707, LOC667230, EG435375
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051J05.bB6Ng01-051J05.g
ACCDH875175DH875176
length863751
definitionDH875175|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J05, 5' end.DH875176|Mus musculus domesticus DNA, BAC clone: B6Ng01-051J05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctatttagctctctacccaatttttcccttgagttatctggtt
ttttggtgtctacattcttgagttcttcatatattttgaacattagcctt
ccatcaaatgtaggattagttaagatcttttctcaacatgtaggttaatg
ttttgccctattgacagtgtcctttgcataaccaaagctttgcagttttc
taagttccaatatgtaaattctttatcttagaacctgagccattgtgttc
tgttcacaaaatttccactcttccattgcattcacgtatatttccctatg
tgtccataggcatgcaggtttatttctggatcttcagttctatgccattg
atctaagtgtatatcactgtaccaatatcatgcaatttttatcattaatg
ctctgtaatacatcttgaagccaggcagcccatcttgggatccattccat
gcataggcatcaaaccttgacactattactgatgtcatgttgtgcttgga
gacaggagattagcatgactgtcttccgagagacactacgaatggctgac
tgagaaacatgcagatgattacagcaaaacatggcctaaggttggagacc
cgtggaagagttagggataggattgaaggagctggacgggatggcaacgc
cataggaagaacaatagtatagtatcaacaaacctagagagctcacggct
cctagagactgagccatcaaccaaagagcatacatggactggtctatggc
taacagcactaatgtagtggaggactgctgtgtcccaccaaagtgggaaa
ggataatcctaatccaatatagaattattgccccagagaggagggatatg
gttgaggtgcact
gaattcaaagatgacatttctcttcctgtaaaaacaaaacagaataaaga
tactcgcaagagactgggagatgaattattaaacatctttgttccttata
aggactaaaattataaaatatgagtattaaagaagtcagagtagactcaa
cttaaggtcaagaatcagataaataggaatgaggatgtatttttgattgt
gccatgcaatcaaatatgaaaatattaatattagctccacaaaacaaaat
aattatgtttaataaaactcttaaatgtattgaaacagtgaaacaagcct
acattttattttattatcattgaaaaattattagtgtatgtaaactttat
gaaatacttttatttatatctaaatgaactttgatcacattctcaccacc
cacccactgtctcagctatctttttgtagagtctcttttctgtatcaaga
agttcacatatgacagtaaacatgtaatacttgtcatttaaggtctaact
tattttgtgtttctcagcataaaagttaaattttgtaaaataggacggag
tttaaataaaatccctagaagaaaaattagttgaaatgaaaatgatgttg
aactaaataagaagtattcaaggaaacctatgttataagcatcttttaca
atagcaatttgtttttatggttttagaactttattgtagaaaggcagaga
gagagagagagagagagagagagagagagagagagagagagagagagaga
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87877420_87878170
seq2: B6Ng01-051J05.g_66_816 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50

seq1  CTCTCTGCCTTTCTACAATAAAGTTCTAAAACCATAAAAACAAATTGCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCCTTTCTACAATAAAGTTCTAAAACCATAAAAACAAATTGCTA  100

seq1  TTGTAAAAGATGCTTATAACATAGGTTTCCTTGAATACTTCTTATTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAAAGATGCTTATAACATAGGTTTCCTTGAATACTTCTTATTTAGT  150

seq1  TCAACATCATTTTCATTTCAACTAATTTTTCTTCTAGGGATTTTATTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCATTTTCATTTCAACTAATTTTTCTTCTAGGGATTTTATTTAA  200

seq1  ACTCCGTCCTATTTTACAAAATTTAACTTTTATGCTGAGAAACACAAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCGTCCTATTTTACAAAATTTAACTTTTATGCTGAGAAACACAAAAT  250

seq1  AAGTTAGACCTTAAATGACAAGTATTACATGTTTACTGTCATATGTGAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGACCTTAAATGACAAGTATTACATGTTTACTGTCATATGTGAAC  300

seq1  TTCTTGATACAGAAAAGAGACTCTACAAAAAGATAGCTGAGACAGTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATACAGAAAAGAGACTCTACAAAAAGATAGCTGAGACAGTGGGT  350

seq1  GGGTGGTGAGAATGTGATCAAAGTTCATTTAGATATAAATAAAAGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGTGAGAATGTGATCAAAGTTCATTTAGATATAAATAAAAGTATTT  400

seq1  CATAAAGTTTACATACACTAATAATTTTTCAATGATAATAAAATAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAGTTTACATACACTAATAATTTTTCAATGATAATAAAATAAAATG  450

seq1  TAGGCTTGTTTCACTGTTTCAATACATTTAAGAGTTTTATTAAACATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTGTTTCACTGTTTCAATACATTTAAGAGTTTTATTAAACATAAT  500

seq1  TATTTTGTTTTGTGGAGCTAATATTAATATTTTCATATTTGATTGCATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTTGTGGAGCTAATATTAATATTTTCATATTTGATTGCATGG  550

seq1  CACAATCAAAAATACATCCTCATTCCTATTTATCTGATTCTTGACCTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCAAAAATACATCCTCATTCCTATTTATCTGATTCTTGACCTTAA  600

seq1  GTTGAGTCTACTCTGACTTCTTTAATACTCATATTTTATAATTTTAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTCTACTCTGACTTCTTTAATACTCATATTTTATAATTTTAGTCC  650

seq1  TTATAAGGAACAAAGATGTTTAATAATTCATCTCCCAGTCTCTTGCGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAGGAACAAAGATGTTTAATAATTCATCTCCCAGTCTCTTGCGAGT  700

seq1  ATCTTTATTCTGTTTTGTTTTTACAGGAAGAGAAATGTCATCTTTGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATTCTGTTTTGTTTTTACAGGAAGAGAAATGTCATCTTTGAATT  750

seq1  C  751
      |
seq2  C  751