BAC Information

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BAC

Clone NameB6Ng01-052M19
Chromosome13 (Build37)
Map Location 16,844,603 - 16,845,502
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665157, Inhba, LOC625181, LOC665191
Downstream gene5033411D12Rik, 2810021B07Rik, Cdc2l5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052M19.bB6Ng01-052M19.g
ACCDH876043DH876044
length1,123904
definitionDH876043|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M19, 5' end.DH876044|Mus musculus domesticus DNA, BAC clone: B6Ng01-052M19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagacttttttgctatcctaggttttttgttattccagac
aaatttgcaaattgctccttccaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttagtagagtcaagccaagatattttatatattt
gtgacttattgagaaggtgtgtttccctaattcctttctcagcctgttta
ttctttgtataaagaaaggccattggacttggttgagtttattttatatc
agcatacttccccggaggcggttattacgggttagggagttctcctggca
gaaattttaggtgccactgtgta
gaattctctctagacaaggctgtcctgcgattcatggatgtactaagtga
ggagactgacactcacatatttagttacagtaatctattaaccagagaca
taaagagaagaattcaagcagaagaatgtaaaatcaagagaattctatca
gagtaaaggcacaagtctattttgtgactcccaggacctatgatgaaaat
tctaagagaaaaaccaaagcttctgacctcttacggtattttccgtgtaa
gtgtttttgtacttttctctggaatgaatcacattaccttcggtgcaaca
gtgacatcacatgtaaggaaactttggtaattgaagtaaagaatccttgc
taaagctccacattgatatagacacacatgtttgctatcaaagagtcagg
atcctgtgtattcttgcaggttctgtcacacatcggttcttagagatcaa
tggtaaacacaaatgattttttacgtcaaatcatggaaataatgcatgat
ttctattcctttggccactcagtcatttatctcaggtaattacatggtac
aggatggcttggtaaactaattactaagctcattcatgtgataatgtctc
ttttagtacagcatgtggaataagtttggggatttcagttccttttcttg
ggatccataatccaggtcttagagaaacaaaaaacaattttatttgagcc
cactacccaggtccaaataggcccagttgtatcttgatgttggttaaatt
cattggtttccagtaatcaggtatgacttcagagaaatagctcttggctg
aggacatggatataagacagaagggtaaatcagtgtgttgttgcacctgt
gtgcatgcttgcacatgttgggtgtgtgtattatatgtggatctatacac
tgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_16844603_16845502
seq2: B6Ng01-052M19.g_69_972 (reverse)

seq1  TCCATGTGTATAGATCCACATAT-ATACACACACCC-ACATGTGCAAGCA  48
      |||| |||||||||||||||||| |||||||||||| |||||||||||||
seq2  TCCA-GTGTATAGATCCACATATAATACACACACCCAACATGTGCAAGCA  49

seq1  TGCACACAGGTGCAACAACACACTGA-TTACCCTTCTGTCTTATATCCAT  97
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGCACACAGGTGCAACAACACACTGATTTACCCTTCTGTCTTATATCCAT  99

seq1  GTCCTCAGCC-AGAGCTATTTCTCTGAAGTCATACCTGATTACTGGAAAC  146
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGCCAAGAGCTATTTCTCTGAAGTCATACCTGATTACTGGAAAC  149

seq1  CAATGAATTTAACCAACATCAAGATACAACTGGGCCTATTTGGACCTGGG  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATTTAACCAACATCAAGATACAACTGGGCCTATTTGGACCTGGG  199

seq1  TAGTGGGCTCAAAT-AAATTGTTTTTTGTTTCTCTAAGACCTGGATTATG  245
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TAGTGGGCTCAAATAAAATTGTTTTTTGTTTCTCTAAGACCTGGATTATG  249

seq1  GATCCCAAGAAAAGGAACTGAAATCCCCAAACTTATTCCACATGCTGTAC  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAAGAAAAGGAACTGAAATCCCCAAACTTATTCCACATGCTGTAC  299

seq1  TAAAAGAGACATTATCACATGAATGAGCTTAGTAATTAGTTTACCAAGCC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAGACATTATCACATGAATGAGCTTAGTAATTAGTTTACCAAGCC  349

seq1  ATCCTGTACCATGTAATTACCTGAGATAAATGACTGAGTGGCCAAAGGAA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTACCATGTAATTACCTGAGATAAATGACTGAGTGGCCAAAGGAA  399

seq1  TAGAAATCATGCATTATTTCCATGATTTGACGTAAAAAATCATTTGTGTT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCATGCATTATTTCCATGATTTGACGTAAAAAATCATTTGTGTT  449

seq1  TACCATTGATCTCTAAGAACCGATGTGTGACAGAACCTGCAAGAATACAC  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTGATCTCTAAGAACCGATGTGTGACAGAACCTGCAAGAATACAC  499

seq1  AGGATCCTGACTCTTTGATAGCAAACATGTGTGTCTATATCAATGTGGAG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCTGACTCTTTGATAGCAAACATGTGTGTCTATATCAATGTGGAG  549

seq1  CTTTAGCAAGGATTCTTTACTTCAATTACCAAAGTTTCCTTACATGTGAT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCAAGGATTCTTTACTTCAATTACCAAAGTTTCCTTACATGTGAT  599

seq1  GTCACTGTTGCACCGAAGGTAATGTGATTCATTCCAGAGAAAAGTACAAA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGTTGCACCGAAGGTAATGTGATTCATTCCAGAGAAAAGTACAAA  649

seq1  AACACTTACACGGAAAATACCGTAAGAGGTCAGAAGCTTTGGTTTTTCTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTACACGGAAAATACCGTAAGAGGTCAGAAGCTTTGGTTTTTCTC  699

seq1  TTAGAATTTTCATCATAGGTCCTGGGAGTCACAAAATAGACTTGTGCCTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATTTTCATCATAGGTCCTGGGAGTCACAAAATAGACTTGTGCCTT  749

seq1  TACTCTGATAGAATTCTCTTGATTTTACATTCTTCTGCTTGAATTCTTCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGATAGAATTCTCTTGATTTTACATTCTTCTGCTTGAATTCTTCT  799

seq1  CTTTATGTCTCTGGTTAATAGATTACTGTAACTAAATATGTGAGTGTCAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATGTCTCTGGTTAATAGATTACTGTAACTAAATATGTGAGTGTCAG  849

seq1  TCTCCTCACTTAGTACATCCATGAATCGCAGGACAGCCTTGTCTAGAGAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCACTTAGTACATCCATGAATCGCAGGACAGCCTTGTCTAGAGAG  899

seq1  AATTC  900
      |||||
seq2  AATTC  904