BAC Information

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BAC

Clone NameB6Ng01-054H07
Chromosome13 (Build37)
Map Location 99,950,548 - 100,087,950
singlet/doubletdoublet
Overlap geneZfp366
Upstream geneRgnef, LOC667703, Utp15, Ankra2, EG667718, Btf3, Foxd1, LOC100039827, LOC100039665, LOC100039854, LOC218501, Tmem174, Tmem171, LOC669675, Fcho2, Tnpo1, EG432798, LOC100039771, 1700024P04Rik, LOC100039967, LOC100039797
Downstream genePtcd2, Mrps27, Mtap1b, Cartpt, Mccc2, Bdp1, Serf1, Smn1, Naip2, Birc1-rs1, Naip5, Birc1c-ps1, Birc1f
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054H07.bB6Ng01-054H07.g
ACCDH877193DH877194
length1,223795
definitionDH877193|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H07, 5' end.DH877194|Mus musculus domesticus DNA, BAC clone: B6Ng01-054H07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,950,548 - 99,951,822)(100,087,163 - 100,087,950)
sequence
gaattcatggggtttgagatcttactggttgagaactacatgttctcaaa
cacagagggatggacagtggcacctatgtaacagggctgttgtgtcctta
gatagctcttgacatgcaaaaagccaacagtgttctccttggtgagtgag
tgttggatgcatatggtagacttccttccccaataaacttgttcaaatga
gtcttcatatcactttttgggcaaattaaacaaaaaactaaaactaaaaa
ggaagaaagaaatgaatgttttagttgttttgagagttgggttttgaaaa
acatcatggcttggcgagagaaagacagtaaaccaaagaaacaatggatg
gctcaaggcagtttcaggctaggcaacccttcagcactttaaaatggcag
aactctgcatgttcacatagaacccagaggtcaatagaggcttactgtcc
acagaaccccaagaggacattaagtctacaccatggggctggagatcagg
agccatcttctctggatcccacagtaagtaaggacggcaccctgagagct
tgttctagcttctcaggcaccctgcaagcatctccaaagcattatcacgt
tctcaaaacaaaagatatgattaaaaaagaaaccctgaatgtcatgtatt
ccatgtgtgaggaactggatgccaagggaaatcaaagcaaccaccaacca
accaaccaaccaaccaaccaaccaaccaaccaaccaacaaaatgctgagt
cactagagtagaatctcctcccagagagaaatgagtcctacttctgacct
ttcagaagacatctgctagggacagatgctatgctgtaacttagaaaatg
actcagaagtccatcttcaggaaagaagacatgtaaattgtggtgtagtc
tcagctttgtagtaccaggcagcaatgcgatgggaatgaactacacacac
actcacacttggggaggaatcttgcaaatgtcaggctgagaacctcttcc
cacccacctgaccccaggcaggatagacaagctagctcgtacgtaccaac
ttcaagcagtatgcacacctgctgtagatcatgtgtcagagcacgaagcc
tgtttctggctgtgaactgcccgctcgacgacgatgctggaattcttagc
gatgtgagcttagtcatttccattaccttggttaatctggctcccactcg
atctattactaccagggggaaca
gaattcaacctgggtcctctagaagaaaagccagtgttcgtaaccactga
gacatctctccagttccccataattacttttaaaaaaacaaaaaaacaga
atgcactggttctccacttgtggggtatgggttacagtgtgccccctttg
gggacaaatggccctttcacagggttgcatatcagatatttacattatga
ttcataacaagcaaaattgtggttatgataccgcaaggaaaataatttta
tagttgggggtcaccacgacatgaggaactgtattaaagggttgaggtgt
taggaaggttgagaaccactgatctgtgggtgcttgggtgacagcagaag
cagggtcacttatgccagagttgatgaaaagaaggaaatgacccagcaca
tagcaagggttattgttcctcaggctctaacagagcagttggctatatat
ctcattgaaccttcaggaaagccctctgagatagcattaccccacttctc
aggaaaaactggaggtcatagattggataccagggagtagaagacaatgg
tatttaaaacaggctgttgggaagcactttagtaaacatgtttctaatca
catgtctgtattgcctgtgtgtgtgtctgtctgtctgtttttgtgtgtgt
gtctgtgttttgtgtgtctgtttttgtatgtgtatatgtgtactttttat
tcatgctgtgtttctttttctacagcagcagaaacttagccgagacagca
gaggggcgcccagattctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_99950548_99951822
seq2: B6Ng01-054H07.b_39_1261

seq1  GAATTCATGGGGTTTGAGATCTTACTGGTTGAGAACTACATGTTCTCAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGGGGTTTGAGATCTTACTGGTTGAGAACTACATGTTCTCAAA  50

seq1  CACAGAGGGATGGACAGTGGCACCTATGTAACAGGGCTGTTGTGTCCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGGGATGGACAGTGGCACCTATGTAACAGGGCTGTTGTGTCCTTA  100

seq1  GATAGCTCTTGACATGCAAAAAGCCAACAGTGTTCTCCTTGGTGAGTGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGCTCTTGACATGCAAAAAGCCAACAGTGTTCTCCTTGGTGAGTGAG  150

seq1  TGTTGGATGCATATGGTAGACTTCCTTCCCCAATAAACTTGTTCAAATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGATGCATATGGTAGACTTCCTTCCCCAATAAACTTGTTCAAATGA  200

seq1  GTCTTCATATCACTTTTTGGGCAAATTAAACAAAAAACTAAAACTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCATATCACTTTTTGGGCAAATTAAACAAAAAACTAAAACTAAAAA  250

seq1  GGAAGAAAGAAATGAATGTTTTAGTTGTTTTGAGAGTTGGGTTTTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAGAAATGAATGTTTTAGTTGTTTTGAGAGTTGGGTTTTGAAAA  300

seq1  ACATCATGGCTTGGCGAGAGAAAGACAGTAAACCAAAGAAACAATGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATGGCTTGGCGAGAGAAAGACAGTAAACCAAAGAAACAATGGATG  350

seq1  GCTCAAGGCAGTTTCAGGCTAGGCAACCCTTCAGCACTTTAAAATGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAGGCAGTTTCAGGCTAGGCAACCCTTCAGCACTTTAAAATGGCAG  400

seq1  AACTCTGCATGTTCACATAGAACCCAGAGGTCAATAGAGGCTTACTGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTGCATGTTCACATAGAACCCAGAGGTCAATAGAGGCTTACTGTCC  450

seq1  ACAGAACCCCAAGAGGACATTAAGTCTACACCATGGGGCTGGAGATCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACCCCAAGAGGACATTAAGTCTACACCATGGGGCTGGAGATCAGG  500

seq1  AGCCATCTTCTCTGGATCCCACAGTAAGTAAGGACGGCACCCTGAGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTTCTCTGGATCCCACAGTAAGTAAGGACGGCACCCTGAGAGCT  550

seq1  TGTTCTAGCTTCTCAGGCACCCTGCAAGCATCTCCAAAGCATTATCACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGCTTCTCAGGCACCCTGCAAGCATCTCCAAAGCATTATCACGT  600

seq1  TCTCAAAACAAAAGATATGATTAAAAAAGAAACCCTGAATGTCATGTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAAACAAAAGATATGATTAAAAAAGAAACCCTGAATGTCATGTATT  650

seq1  CCATGTGTGAGGAACTGGATGCCAAGGGAAATCAAAGCAACCACCAACCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGTGAGGAACTGGATGCCAAGGGAAATCAAAGCAACCACCAACCA  700

seq1  ACCAACCAACCAACCAACCAACCAACCAACCAACCAACAAAATGCTGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAACCAACCAACCAACCAACCAACCAACCAACCAACAAAATGCTGAGT  750

seq1  CACTAGAGTAGAATCTCCTCCCAGAGAGAAATGAGTCCTACTTCTGACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGAGTAGAATCTCCTCCCAGAGAGAAATGAGTCCTACTTCTGACCT  800

seq1  TTCAGAAGACATCTGCTAGGGACAGATGCTATGCTGTAACTTAGAAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAAGACATCTGCTAGGGACAGATGCTATGCTGTAACTTAGAAAATG  850

seq1  ACTCAGAAGTCCATCTTCAGGAAAGAAGACATGTAAATTGTGGTGTAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGAAGTCCATCTTCAGGAAAGAAGACATGTAAATTGTGGTGTAGTC  900

seq1  CCAGC-TTGTAGTACCAGGCAGCAATGCGATGGGAATGAACTACACACAC  949
       |||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTGTAGTACCAGGCAGCAATGCGATGGGAATGAACTACACACAC  950

seq1  ACTCAACACTTGGGGAGGAATCTTGCAAATGTCAAGGCTGAGAAACCCTC  999
      |||| |||||||||||||||||||||||||||| ||||||||||  ||||
seq2  ACTC-ACACTTGGGGAGGAATCTTGCAAATGTC-AGGCTGAGAA--CCTC  996

seq1  TCCCCACCCCACCCTGACCCCCAAGCAGGGATAGACAAGGCTAGCTTCGT  1049
      | |||||||   ||||| ||||| ||| |||||||||| |||||| ||||
seq2  TTCCCACCC--ACCTGA-CCCCAGGCA-GGATAGACAA-GCTAGC-TCGT  1040

seq1  ACGTTACACAACTTCAAAAGCAGGTATGCACACCTGCTGTTAGATACATG  1099
      ||| ||| |||||||  ||||| |||||||||||||||| ||||| ||||
seq2  ACG-TAC-CAACTTC--AAGCA-GTATGCACACCTGCTG-TAGAT-CATG  1083

seq1  TGGTCAAAGGAGCACGAAAGCCCTGTTTCTGGCTGTGAACATTGCCCGCT  1149
      | ||||   |||||||||   |||||||||||||||||||  ||||||||
seq2  T-GTCA---GAGCACGAA--GCCTGTTTCTGGCTGTGAAC--TGCCCGCT  1125

seq1  CAGACAGACAGATTGCTGGAGTTTCTCTAGCCAGTATGTGAAGCTTTTAG  1199
      | ||| ||| || |||||||  |||| ||||    ||||| |||  ||||
seq2  C-GAC-GAC-GA-TGCTGGA-ATTCT-TAGC---GATGTG-AGC--TTAG  1163

seq1  TACATTTTTCCTAATGTACACTCTGTTTTAATACTGGCTCCCCACCTCCA  1249
      | ||  |||||  || |||   ||   ||||| |||||||||   |||  
seq2  T-CA--TTTCC--AT-TAC---CTTGGTTAAT-CTGGCTCCC--ACTC--  1199

seq1  GATCTAAATTACTACCAGGGTGAACA  1275
      |||||  ||||||||||||| |||||
seq2  GATCT--ATTACTACCAGGGGGAACA  1223

seq1: chr13_100087163_100087950
seq2: B6Ng01-054H07.g_67_861 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTGGGCG-CCCTCTGCTG  49
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCTGGGCGCCCCTCTGCTG  50

seq1  TCTCGGCTAAG-TTCTGCTGCTGTAGAAAA--GAACACAGCATGAAT-AA  95
      ||||||||||| ||||||||||||||||||   |||||||||||||| ||
seq2  TCTCGGCTAAGTTTCTGCTGCTGTAGAAAAAGAAACACAGCATGAATAAA  100

seq1  AAGTACACATATACACATAC-AAAACAGACACACAAAACACAGACACACA  144
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGTACACATATACACATACAAAAACAGACACACAAAACACAGACACACA  150

seq1  CAC-AAAACAGACAGACAGACACACACACAGGCAATACAGACATGTGATT  193
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAAACAGACAGACAGACACACACACAGGCAATACAGACATGTGATT  200

seq1  AGAAACATGTTTACTAAAGTGCTTCCCAACAGCCTGTTTTAAATACCATT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATGTTTACTAAAGTGCTTCCCAACAGCCTGTTTTAAATACCATT  250

seq1  GTCTTCTACTCCCTGGTATCCAATCTATGACCTCCAGTTTTTCCTGAGAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTACTCCCTGGTATCCAATCTATGACCTCCAGTTTTTCCTGAGAA  300

seq1  GTGGGGTAATGCTATCTCAGAGGGCTTTCCTGAAGGTTCAATGAGATATA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGTAATGCTATCTCAGAGGGCTTTCCTGAAGGTTCAATGAGATATA  350

seq1  TAGCCAACTGCTCTGTTAGAGCCTGAGGAACAATAACCCTTGCTATGTGC  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAACTGCTCTGTTAGAGCCTGAGGAACAATAACCCTTGCTATGTGC  400

seq1  TGGGTCATTTCCTTCTTTTCATCAACTCTGGCATAAGTGACCCTGCTTCT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCATTTCCTTCTTTTCATCAACTCTGGCATAAGTGACCCTGCTTCT  450

seq1  GCTGTCACCCAAGCACCCACAGATCAGTGGTTCTCAACCTTCCTAACACC  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACCCAAGCACCCACAGATCAGTGGTTCTCAACCTTCCTAACACC  500

seq1  TCAACCCTTTAATACAGTTCCTCATGTCGTGGTGACCCCCAACTATAAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTTTAATACAGTTCCTCATGTCGTGGTGACCCCCAACTATAAAA  550

seq1  TTATTTTCCTTGCGGTATCATAACCACAATTTTGCTTGTTATGAATCATA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCCTTGCGGTATCATAACCACAATTTTGCTTGTTATGAATCATA  600

seq1  ATGTAAATATCTGATATGCAACCCTGTGAAAGGGCCATTTGTCCCCAAAG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATATCTGATATGCAACCCTGTGAAAGGGCCATTTGTCCCCAAAG  650

seq1  GGGGCACACTGTAACCCATACCCCACAAGTGGAGAACCAGTGCATTCTGT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCACACTGTAACCCATACCCCACAAGTGGAGAACCAGTGCATTCTGT  700

seq1  TTTTTTGTTTTTTTAAAAGTAATTATGGGGAACTGGAGAGATGTCTCAGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTTTAAAAGTAATTATGGGGAACTGGAGAGATGTCTCAGT  750

seq1  GGTTACGAACACTGGCTTTTCTTCTAGAGGACCCAGGTTGAATTC  788
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTACGAACACTGGCTTTTCTTCTAGAGGACCCAGGTTGAATTC  795