BAC Information

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BAC

Clone NameB6Ng01-056G13
Chromosome13 (Build37)
Map Location 103,581,773 - 103,759,095
singlet/doubletdoublet
Overlap geneMast4
Upstream geneCd180
Downstream geneEG621312, EG432800, LOC432801, LOC100040045, Ppia-ps13_1282.1, Sfrs12, Erbb2ip, LOC100040086, D130037M23Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056G13.bB6Ng01-056G13.g
ACCDH878573DH878574
length912739
definitionDH878573|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G13, 5' end.DH878574|Mus musculus domesticus DNA, BAC clone: B6Ng01-056G13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(103,758,328 - 103,759,095)(103,581,773 - 103,582,512)
sequence
gaattctctgatcttattgaagatgtttttacagatgcaatgtcagaatt
ttttcttttaaaatttattattattattgttgctgctgctgctgttgttg
ttgtttgggttttttttctgatagaatatttctctgtgtagccctggctg
tcctggaactctctgtgtggaccagactgtcttcaaagacacatatcttc
cagcctctgccttctgagtgtggggttgaaagcatgtgctactattgcct
gacttcttttaaaaactatttaactggggatagtggcacaggttttttta
aagcagcacttgaaagacaaaggcagaagcagatgaatctatgtgagttc
aaggccagtctggactacatagtgagttccaggacagccagtactaatga
gtttgtctccaacaatgtcccctgcccaaaataaaataaaataaatctaa
aataaaataaaataaaatatacagtgtcctttagagagaacacacatact
cagccacatattagttgcccagtgagggtaaagagagtttataaaggatc
agtttgaagagttaacaccagctattaaaaggaatccctccccataaaac
cagtttctgatccctggtcatgaagaattccaaacattaaatttccctgt
acactttttcctgcttcttcaactgataacaatctttgagacctgtaacc
acacactatttatcttttgcaacctccataaaaacccttgactgtccctc
attgtactggctagttttgtgtcaacttgacacagctggaggtatcacaa
gaaaggagcttcagttgaggaaatgcctccatgagatccaactgtaaggc
attttctcaattagtgatcaaggggaaaaggcccctgtgggtgggaccat
ctctgggctggt
gaattcataaataccagacactgagcactgagctatgcaccaggaaataa
gagaggacttgtggtcttcaaagggcttgctgatagaaatgtgaggcttc
cctcccttgccgtcctcaaatcttgttaggatccatcatgtggggactat
agacacaggccatgctgtggtgtttgtcttaagccgaatggatatcaatg
aaaagggctgagctattctcagagctgaacagatacctggatttgaaggg
ttaggtttggaaataggaagtctggtggagccaggtaacaacagaaaagg
agagacagggtggagaatctcgaggaagagtcaggacgatgctctgatgt
agagagtagttgcctgatgtagagaaagagatgatcctaactccgaatcc
taccaagtgctagggatacagtggtggtgataaaggcagaaaagtactag
gtactcacagctctggttaaaaagatgctaagtctacctgagacatgttg
gggttgcctgcactgctacagcaggctagccgagtccaaagatacacaag
aggcaggtgaaaacacaaatctcaaggttgatagcaagctgctggtcaga
gatatacactgaaatcaaccaacatccaaaggactgtcattcaagacagc
ggacaacaacactgccagtagggggaggagaaagaggagaacacaaatga
attggagaaaactcactcatagaaatgtgggctgaaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_103758328_103759095
seq2: B6Ng01-056G13.b_42_811 (reverse)

seq1  ACAAAACTAGCCAGTACAATGAGGGACAGTCAAGGG-TTTTATGGAGGTT  49
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACAAAACTAGCCAGTACAATGAGGGACAGTCAAGGGTTTTTATGGAGGTT  50

seq1  GC-AAAGATAAATAGTGTGTGGTTACAGGTCTCAAAGATTGTTATCAGTT  98
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAGATAAATAGTGTGTGGTTACAGGTCTCAAAGATTGTTATCAGTT  100

seq1  GAAGAAGCAGGAAAAAGTGTACAGGGAAATTTAATGTTTGGAATTCTTCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGCAGGAAAAAGTGTACAGGGAAATTTAATGTTTGGAATTCTTCA  150

seq1  TGACCAGGGATCAGAAACTGGTTTTATGGGGAGGGATTCCTTTTAATAGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAGGGATCAGAAACTGGTTTTATGGGGAGGGATTCCTTTTAATAGC  200

seq1  TGGTGTTAACTCTTCAAACTGATCCTTTATAAACTCTCTTTACCCTCACT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTAACTCTTCAAACTGATCCTTTATAAACTCTCTTTACCCTCACT  250

seq1  GGGCAACTAATATGTGGCTGAGTATGTGTGTTCTCTCTAAAGGACACTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAACTAATATGTGGCTGAGTATGTGTGTTCTCTCTAAAGGACACTGT  300

seq1  ATATTTTATTTTATTTTATTTTAGATTTATTTTATTTTATTTTGGGCAGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTATTTTATTTTATTTTAGATTTATTTTATTTTATTTTGGGCAGG  350

seq1  GGACATTGTTGGAGACAAACTCATTAGTACTGGCTGTCCTGGAACTCACT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGTTGGAGACAAACTCATTAGTACTGGCTGTCCTGGAACTCACT  400

seq1  ATGTAGTCCAGACTGGCCTTGAACTCACATAGATTCATCTGCTTCTGCCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGTCCAGACTGGCCTTGAACTCACATAGATTCATCTGCTTCTGCCT  450

seq1  TTGTCTTTCAAGTGCTGCTTTAAAAAAACCTGTGCCACTATCCCCAGTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCAAGTGCTGCTTTAAAAAAACCTGTGCCACTATCCCCAGTTA  500

seq1  AATAGTTTTTAAAAGAAGTCAGGCAATAGTAGCACATGCTTTCAACCCCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTTAAAAGAAGTCAGGCAATAGTAGCACATGCTTTCAACCCCA  550

seq1  CACTCAGAAGGCAGAGGCTGGAAGATATGTGTCTTTGAAGACAGTCTGGT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGAAGGCAGAGGCTGGAAGATATGTGTCTTTGAAGACAGTCTGGT  600

seq1  CCACACAGAGAGTTCCAGGACAGCCAGGGCTACACAGAGAAATATTCTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGAGAGTTCCAGGACAGCCAGGGCTACACAGAGAAATATTCTAT  650

seq1  CAGAAAAAAAACCCAAACAACAACAACAGCAGCAGCAGCAACAATAATAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAAAACCCAAACAACAACAACAGCAGCAGCAGCAACAATAATAA  700

seq1  TAATAAATTTTAAAAGAAAAAATTCTGACATTGCATCTGTAAAAACATCT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATTTTAAAAGAAAAAATTCTGACATTGCATCTGTAAAAACATCT  750

seq1  TCAATAAGATCAGAGAATTC  768
      ||||||||||||||||||||
seq2  TCAATAAGATCAGAGAATTC  770

seq1: chr13_103581773_103582512
seq2: B6Ng01-056G13.g_69_807

seq1  GAATTCATAAATACCAGACACTGAGCACTGAGCTATGCACCAGGAAATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATAAATACCAGACACTGAGCACTGAGCTATGCACCAGGAAATAA  50

seq1  GAGAGGACTTGTGGTCTTCAAAGGGCTTGCTGATAGAAATGTGAGGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGACTTGTGGTCTTCAAAGGGCTTGCTGATAGAAATGTGAGGCTTC  100

seq1  CCTCCCTTGCCGTCCTCAAATCTTGTTAGGATCCATCATGTGGGGACTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTTGCCGTCCTCAAATCTTGTTAGGATCCATCATGTGGGGACTAT  150

seq1  AGACACAGGCCATGCTGTGGTGTTTGTCTTAAGCCGAATGGATATCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACAGGCCATGCTGTGGTGTTTGTCTTAAGCCGAATGGATATCAATG  200

seq1  AAAAGGGCTGAGCTATTCTCAGAGCTGAACAGATACCTGGATTTGAAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGCTGAGCTATTCTCAGAGCTGAACAGATACCTGGATTTGAAGGG  250

seq1  TTAGGTTTGGAAATAGGAAGTCTGGTGGAGCCAGGTAACAACAGAAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTGGAAATAGGAAGTCTGGTGGAGCCAGGTAACAACAGAAAAGG  300

seq1  AGAGACAGGGTGGAGAATCTCGAGGAAGAGTCAGGACGATGCTCTGATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACAGGGTGGAGAATCTCGAGGAAGAGTCAGGACGATGCTCTGATGT  350

seq1  AGAGAGTAGTTGCCTGATGTAGAGAAAGAGATGATCCTAACTCCGAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTAGTTGCCTGATGTAGAGAAAGAGATGATCCTAACTCCGAATCC  400

seq1  TACCAAGTGCTAGGGATACAGTGGTGGTGATAAAGGCAGAAAAGTACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAGTGCTAGGGATACAGTGGTGGTGATAAAGGCAGAAAAGTACTAG  450

seq1  GTACTCACAGCTCTGGTTAAAAAGATGCTAAGTCTACCTGAGACATGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCACAGCTCTGGTTAAAAAGATGCTAAGTCTACCTGAGACATGTTG  500

seq1  GGGTTGCCTGCACTGCTACAGCAGGCTAGCCGAGTCCAAAGATACACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTGCCTGCACTGCTACAGCAGGCTAGCCGAGTCCAAAGATACACAAG  550

seq1  AGGCAGGTGAAAACACAAATCTCAAGGTTGATAGCAAGCTGCTGGTCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGTGAAAACACAAATCTCAAGGTTGATAGCAAGCTGCTGGTCAGA  600

seq1  GATATACACTGAAATCAACCAACATCCAAAGGACTGTCATTCAAGACAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACACTGAAATCAACCAACATCCAAAGGACTGTCATTCAAGACAGC  650

seq1  GGACAACAACACTGCCAGTAGGGGGAGGAGAAAGAGGAGAACACAAATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAACAACACTGCCAGTAGGGGGAGGAGAAAGAGGAGAACACAAATGA  700

seq1  ATTGGAGAAAACTCACTCATAGAAATGTGGGCTAGAAAGG  740
      ||||||||||||||||||||||||||||||||| ||||||
seq2  ATTGGAGAAAACTCACTCATAGAAATGTGGGCT-GAAAGG  739