BAC Information

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BAC

Clone NameB6Ng01-056O01
Chromosome7 (Build37)13 (Build37)
Map Location 102,642,226 - 102,642,35113,314,648 - 13,315,344
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG666816, LOC100040132, LOC666823
Downstream geneFrda-ps, EG666836, Odz4, LOC670727, LOC666858
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056O01.bB6Ng01-056O01.g
ACCDH878907DH878908
length647698
definitionDH878907|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O01, 5' end.DH878908|Mus musculus domesticus DNA, BAC clone: B6Ng01-056O01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(102,642,226 - 102,642,351)(13,314,648 - 13,315,344)
sequence
gaattcaactaatgtgtgaggatatatgtctgagaagcaatttaataata
atattaaactaggaaattatagaaatataatttatgttcaattacaatag
cagcattttaccctatacactctaggacttacctagccataggttcttta
cacagttaccaataagagatgtttcctttctgtggaacaacctaatcaga
aagcacttggtttctctcataatactcatgctgctgttgtaccaatggtc
atatctagacaatccattcattattatagcaaacaatgttcacatcttgc
agactgttgatttctttccttctccacaggcatgcacatcctacagcact
ttgaaagcttgctggcaaatattaagcttactgatgtttgatttccttat
ttcctatgccgtagataatgtagactcttcagcactaaggtcttactgtt
aagttctgaagcataactgactgtaatgataacaagcagttttttttcca
gtgacaatttatttatttatttatttattttttgtttttgtttttttttt
ttaatttttttaattaggtattttcctcgtttacattttcaatgctatcc
caaaggtcccccatacccaccccacccccaatccccctacccaccca
gaattcattgccaatttctaatcccagtaataaaatcccctgtatacaaa
tatgtaaaactcaaggatcaaagaacaatggaagcaacatagagttttac
atatttaataagaaaaaataccttaaatacaaaataacttctgttttcac
catattcttttgacttctaaaagaagagcccgtaatataaaataaaaaat
aataattaccatgaaggtattgctcaactttttcagtattatattattat
attctaccatgttctaaaattttgagatcctcacagaaagagaaaaagta
ggattccaacgatatcaaccctcaagtgatgaccatccttggttgtgaac
ttgactacatgtataattaactgcaatccaagaagcagggcatgtctgtg
aggaatttgactttgtgagatcattggtggtagaaagacacatcctaaat
ctgaatcatttgaggtgggaagacttaaagttggcccacaccttctggag
gcagcctatggagaatcagaagatggaagctcttgttctttgcctgattg
ccttgatagcctgattacaatgaattctcatgggaatggtcacttcttca
tggtattaaaagtcaagttctttttggattctagcacatactgagaccaa
ctgagatatctagtctcacagattgaacaattttttcttcttgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_102642226_102642351
seq2: B6Ng01-056O01.b_566_679 (reverse)

seq1  TGGGTGGGTA-GGGGATTGGG---GGGGTGGGTATGGGGGACCTTTGGGA  46
      |||||||||| ||||||||||   ||||||||||||||||||||||||||
seq2  TGGGTGGGTAGGGGGATTGGGGGTGGGGTGGGTATGGGGGACCTTTGGGA  50

seq1  TAGCATTGAAAATGTAAATGAGGAAAATACCTAATTAAAAAAAATTAAAA  96
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  TAGCATTGAAAATGTAAACGAGGAAAATACCTAATT-AAAAAAATTAAAA  99

seq1  TGTTTACATAACTGTAAAAAAAAAAAAAAC  126
                     |||||||| ||||||
seq2  ---------------AAAAAAAACAAAAAC  114

seq1: chr13_13314648_13315344
seq2: B6Ng01-056O01.g_70_767 (reverse)

seq1  AAAAACAAGAAGAAAAAATTGTTCAATCTGTGAGACTAGATATCTCAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAGAAGAAAAAATTGTTCAATCTGTGAGACTAGATATCTCAGTT  50

seq1  GGTCTCAGTATGTGCTAGAATCC-AAAAGAACTTGAC-TTTAATACCATT  98
      ||||||||||||||||||||||| ||||||||||||| |||||||||| |
seq2  GGTCTCAGTATGTGCTAGAATCCAAAAAGAACTTGACTTTTAATACCA-T  99

seq1  GAAGAAGTGACCATTCCCATGAGAATTCATTGTAATCAGGCTATCAAGGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGTGACCATTCCCATGAGAATTCATTGTAATCAGGCTATCAAGGC  149

seq1  AATCAGGCAAAGAACAAGAGCTTCCATCTTCTGATTCTCCATAGGCTGCC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGCAAAGAACAAGAGCTTCCATCTTCTGATTCTCCATAGGCTGCC  199

seq1  TCCAGAAGGTGTGGGCCAACTTTAAGTCTTCCCACCTCAAATGATTCAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGAAGGTGTGGGCCAACTTTAAGTCTTCCCACCTCAAATGATTCAGA  249

seq1  TTTAGGATGTGTCTTTCTACCACCAATGATCTCACAAAGTCAAATTCCTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATGTGTCTTTCTACCACCAATGATCTCACAAAGTCAAATTCCTC  299

seq1  ACAGACATGCCCTGCTTCTTGGATTGCAGTTAATTATACATGTAGTCAAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACATGCCCTGCTTCTTGGATTGCAGTTAATTATACATGTAGTCAAG  349

seq1  TTCACAACCAAGGATGGTCATCACTTGAGGGTTGATATCGTTGGAATCCT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAACCAAGGATGGTCATCACTTGAGGGTTGATATCGTTGGAATCCT  399

seq1  ACTTTTTCTCTTTCTGTGAGGATCTCAAAATTTTAGAACATGGTAGAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTTCTCTTTCTGTGAGGATCTCAAAATTTTAGAACATGGTAGAATA  449

seq1  TAATAATATAATACTGAAAAAGTTGAGCAATACCTTCATGGTAATTATTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATATAATACTGAAAAAGTTGAGCAATACCTTCATGGTAATTATTA  499

seq1  TTTTTTATTTTATATTACGGGCTCTTCTTTTAGAAGTCAAAAGAATATGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTATTTTATATTACGGGCTCTTCTTTTAGAAGTCAAAAGAATATGG  549

seq1  TGAAAACAGAAGTTATTTTGTATTTAAGGTATTTTTTCTTATTAAATATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGAAGTTATTTTGTATTTAAGGTATTTTTTCTTATTAAATATG  599

seq1  TAAAACTCTATGTTGCTTCCATTGTTCTTTGATCCTTGAGTTTTACATAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTCTATGTTGCTTCCATTGTTCTTTGATCCTTGAGTTTTACATAT  649

seq1  TTGTATACAGGGGATTTTATTACTGGGATTAGAAATTGGCAATGAATTC  697
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATACAGGGGATTTTATTACTGGGATTAGAAATTGGCAATGAATTC  698