BAC Information

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BAC

Clone NameB6Ng01-057D24
Chromosome13 (Build37)
Map Location 84,317,272 - 84,457,602
singlet/doubletdoublet
Overlap geneTmem161b, LOC666795
Upstream geneMef2c, LOC100043111, LOC623241, LOC432789, 2810049E08Rik, LOC100043119, LOC667081, LOC667101
Downstream geneLOC667111, LOC382786, LOC100042841, LOC100042851, LOC100042857, LOC100042862, Ccnh, Rasa1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057D24.bB6Ng01-057D24.g
ACCDH879176DH879177
length972307
definitionDH879176|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D24, 5' end.DH879177|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,457,081 - 84,457,602)(84,317,272 - 84,317,578)
sequence
gaattctctaagtaaaatttcaaaagtacgtatagcacagctctcatata
tatttactttgaaacagaggcacagccttcagtcaatttctttctttctc
tctctttttttttatagacacaatttttatttcaaaatataactccttgt
cttttaggctttacaagtcctgattggttatcttgtaacaaatattggga
caggtttcatcctcagaaattagatgattcctggaacacagtagatatat
attaaaaatgtatggagtgagtgaatgaatgaataagtgaactcagaaag
aaaggagaaagccaattctttctttaagagctagggatatacatcagagg
tagagagtttgcagagcgtgggcaagttgtaggttcaacacaacacaagt
tgtaggtagcatcagaagtgttctattcctaagtttctgggctaatatcc
acttaccagtgagtacatatcatgtgagttcttttgtgattgggttacct
cactcagaatgataccctccaggtccatccatttggctaggaatttcata
aattcattctttttaatagctgagttgtactccattgtataaatgtacca
cattttctgtatgcattcctctgttgagggacatctgggttctttccagc
ttctggctattataaataaggctgctatgaacgtagtggagcatgtgtcc
ttcttaccagttggaagatcttctggatatatgcccaggagaggtactgc
aggattgcaaaacacatgaaactcaagaagaacaaagaccaaagtgtgga
cactttggccctttttagaattgggaacaaaacacccatggaaggagtta
cagagacaaagtttggagctgagacgaaaggatggaccatctagagactg
ccacacccggggatgggatccatcccataatcagcttccaaatgctgaca
acatggcatatgccagcagatt
tttgtgctaaaggagaggaacccagaagtctgacatctctttttaaggtg
gagaaaaacaaattcatctgcctatggttctctggtgacttgcatatcag
gagattcgttaactccaagttccctgaggactacttagttacgcacatct
cttgctttttatttagaccctgccctgagatcaggaactaggagatgaac
ttgaagagagggaacactgagtccctattctcaatatgcccacattgaat
aaatcttattttcctgatttttaccatgagattgtgtggggggggggaca
gaggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84457081_84457602
seq2: B6Ng01-057D24.b_46_567 (reverse)

seq1  CTGGAGGGTATCATTCTGAGTGAGGTAACCCAATCACAAAAGAACTCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGGTATCATTCTGAGTGAGGTAACCCAATCACAAAAGAACTCACA  50

seq1  TGATATGTACTCACTGGTAAGTGGATATTAGCCCAGAAACTTAGGAATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGTACTCACTGGTAAGTGGATATTAGCCCAGAAACTTAGGAATAG  100

seq1  AACACTTCTGATGCTACCTACAACTTGTGTTGTGTTGAACCTACAACTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTCTGATGCTACCTACAACTTGTGTTGTGTTGAACCTACAACTTG  150

seq1  CCCACGCTCTGCAAACTCTCTACCTCTGATGTATATCCCTAGCTCTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGCTCTGCAAACTCTCTACCTCTGATGTATATCCCTAGCTCTTAAA  200

seq1  GAAAGAATTGGCTTTCTCCTTTCTTTCTGAGTTCACTTATTCATTCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATTGGCTTTCTCCTTTCTTTCTGAGTTCACTTATTCATTCATTC  250

seq1  ACTCACTCCATACATTTTTAATATATATCTACTGTGTTCCAGGAATCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTCCATACATTTTTAATATATATCTACTGTGTTCCAGGAATCATC  300

seq1  TAATTTCTGAGGATGAAACCTGTCCCAATATTTGTTACAAGATAACCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCTGAGGATGAAACCTGTCCCAATATTTGTTACAAGATAACCAAT  350

seq1  CAGGACTTGTAAAGCCTAAAAGACAAGGAGTTATATTTTGAAATAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTTGTAAAGCCTAAAAGACAAGGAGTTATATTTTGAAATAAAAAT  400

seq1  TGTGTCTATAAAAAAAAAGAGAGAGAAAGAAAGAAATTGACTGAAGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTATAAAAAAAAAGAGAGAGAAAGAAAGAAATTGACTGAAGGCTG  450

seq1  TGCCTCTGTTTCAAAGTAAATATATATGAGAGCTGTGCTATACGTACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTTTCAAAGTAAATATATATGAGAGCTGTGCTATACGTACTTT  500

seq1  TGAAATTTTACTTAGAGAATTC  522
      ||||||||||||||||||||||
seq2  TGAAATTTTACTTAGAGAATTC  522

seq1: chr13_84317272_84317578
seq2: B6Ng01-057D24.g_73_379

seq1  TTTGTGCTAAAGGAGAGGAACCCAGAAGTCTGACATCTCTTTTTAAGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGCTAAAGGAGAGGAACCCAGAAGTCTGACATCTCTTTTTAAGGTG  50

seq1  GAGAAAAACAAATTCATCTGCCTATGGTTCTCTGGTGACTTGCATATCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAACAAATTCATCTGCCTATGGTTCTCTGGTGACTTGCATATCAG  100

seq1  GAGATTCGTTAACTCCAAGTTCCCTGAGGACTACTTAGTTACGCACATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCGTTAACTCCAAGTTCCCTGAGGACTACTTAGTTACGCACATCT  150

seq1  CTTGCTTTTTATTTAGACCCTGCCCTGAGATCAGGAACTAGGAGATGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTTTTATTTAGACCCTGCCCTGAGATCAGGAACTAGGAGATGAAC  200

seq1  TTGAAGAGAGGGAACACTGAGTCCCTATTCTCAATATGCCCACATTGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAGAGGGAACACTGAGTCCCTATTCTCAATATGCCCACATTGAAT  250

seq1  AAATCTTATTTTCCTGATTTTTACCATGAGATTGTGTGGGGGGGGGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTATTTTCCTGATTTTTACCATGAGATTGTGTGGGGGGGGGGACA  300

seq1  GAGGAGG  307
      |||||||
seq2  GAGGAGG  307