BAC Information

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BAC

Clone NameB6Ng01-061F23
Chromosome13 (Build37)
Map Location 114,984,960 - 115,101,592
singlet/doubletdoublet
Overlap geneNdufs4
Upstream geneEsm1, BC067074, LOC100040888, Snag1, Hspb3, EG632832, LOC622701, LOC100040927, Arl15, A430090L17Rik
Downstream geneLOC100040958, Fst, 4930467J12Rik, Mocs2, Itga2, LOC100040975, Itga1, Pelo
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061F23.bB6Ng01-061F23.g
ACCDH882071DH882072
length1,119566
definitionDH882071|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F23, 5' end.DH882072|Mus musculus domesticus DNA, BAC clone: B6Ng01-061F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,100,467 - 115,101,592)(114,984,960 - 114,985,531)
sequence
gaattctttgggggctggagaaatggctcagaggttacactaactgctct
tccagaggtcctgagtgtagttcccagcaacaacatggtggcttataacc
atcaataatgagatctggtgccctcttctggcatgtaggcatatatgcag
gtagaataattatatatatatataataaacatatactatatatatatata
aaataaatgttagaatccttcatgtgtttagtgactggtgtttttgcaca
acattattggatttataagattcatctgttctattaaagcaacaccttgg
ggtttttcaattggagtttttaacctataaattctgaagtgaagaatctc
atgtagatctttaatgaatgatggttaatcattgatttgtaatcaagtct
ccttacactgtgaagtatcgatactatattaatcctctgacccttgcttc
tcttggactaagggaagccactgtgtagttttgtcctggtcgacgtcaca
ggactactagctcacctggaactggttccggatccgtttgttttccttgc
ttgcttggtgctctgacttagtcctgaaacctgttgcttctggttaaaag
gcgtagtctttctgacagtccagtggagagcacaggcgcttagcaagtcc
tgacttgttttagccgggagtcgattcacaaatttcactctagcctgtcc
agctgcttctccaacaacccaagagagacattgatcttcagacgagaagc
aagacccgaaactgctgatgaagtctgggcttcactgtggtgcttttctg
ggattcctgtatgatacgacccctatcaaaaccttcagcacagatttctc
atgtagacaagctgcactttctgcttgatttctgcatgttcctatgtgtc
caaactatagaattcttagggggaaaagtatgaactattttcaaatacag
tttctttggagtggaaggattctttctagttatggctgcttttggtcttt
ctctcatcattttctctgttgctttgcatgcatttgtagtcaggtaaatt
tttagaaaggagtttttttatcatcacttacttggaccttgccagctgag
aaatgaggcaaagtagaaa
tgtgcccccctcctgctctctctctctctctctctctctctctctccctc
tctctctccccccctctcttcttttcctctgtacaagtatttcagatata
tcaggtgtgcacaaaatagtgagtggtaatttactggtttcagcccaaat
ggtactcatagaacaaaaaagttaattggtttctgctgtgacatatacat
aaatactgtcttcccagttcacaaaaagttccattttgctttggtgttga
ggtttaatcttttgatatgtaatgtaatgttaaaaattgcccccccccca
aggcccggttgctcctaggaatgagagaatctgcacatacaatgtgacct
tgcttcttaatttaaaactattggttaaataaagatgctaacaactaata
attgggaagaagaatcataggcagagtttggggttcccgggcttagggtc
tgaggagaccacaatggaggagaggaaggcagggaaataatatgctatct
ggtaatatctcagttgccgtgtgggttggctaatgtagttaagagtgact
cagacagaacatggca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_115100467_115101592
seq2: B6Ng01-061F23.b_47_1165 (reverse)

seq1  TTTCTACTGTTGCCTCAATTCTCAGCTGGCAAGGTTCCAAGTTAGTGATG  50
      |||||||| |||||||| |||||||||||||||| ||||||| |||||||
seq2  TTTCTACT-TTGCCTCATTTCTCAGCTGGCAAGG-TCCAAGTAAGTGATG  48

seq1  ATAAAGAAACTCCTTTCTAAGAAATCTACCTGACTAACAAATGCATGCAG  100
      ||||| |||||||||||||| |||| ||||||||| ||||||||||||| 
seq2  ATAAAAAAACTCCTTTCTAA-AAATTTACCTGACT-ACAAATGCATGCAA  96

seq1  AGCAAAACAGAGAAAATGAATGAGAGAAAGACCAAAAGCAGCCATAACTA  150
      |||  ||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGC--AACAGAGAAAATG-ATGAGAGAAAGACCAAAAGCAGCCATAACTA  143

seq1  GAAAGAATCCTTCCACTCCAAAGAAACTGTATTTGAAAATAGTTCATACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAATCCTTCCACTCCAAAGAAACTGTATTTGAAAATAGTTCATACT  193

seq1  TTTCCCCCTAAGAATTCTATAGTTTGGACACATAGGAACATGCAGAAATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCCCTAAGAATTCTATAGTTTGGACACATAGGAACATGCAGAAATC  243

seq1  AAGCAGAAAGTGCAGCTTGTCTACATGAGAAATCTGTGCTGAAGGTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGAAAGTGCAGCTTGTCTACATGAGAAATCTGTGCTGAAGGTTTTG  293

seq1  ATAGGGGTCGTATCATACAGGAATCCCAGAAAAGCACCACAGTGAAGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGGTCGTATCATACAGGAATCCCAGAAAAGCACCACAGTGAAGCCC  343

seq1  AGACTTCATCAGCAGTTTCGGGTCTTGCTTCTCGTCTGAAGATCAATGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTCATCAGCAGTTTCGGGTCTTGCTTCTCGTCTGAAGATCAATGTC  393

seq1  TCTCTTGGGTTGTTGGAGAAGCAGCTGGACAGGCTAGAGTGAAATTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGGTTGTTGGAGAAGCAGCTGGACAGGCTAGAGTGAAATTTGTG  443

seq1  AATCGACTCCCGGCTAAAACAAGTCAGGACTTGCTAAGCGCCTGTGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGACTCCCGGCTAAAACAAGTCAGGACTTGCTAAGCGCCTGTGCTCT  493

seq1  CCACTGGACTGTCAGAAAGACTACGCCTTTTAACCAGAAGCAACAGGTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGGACTGTCAGAAAGACTACGCCTTTTAACCAGAAGCAACAGGTTT  543

seq1  CAGGACTAAGTCAGAGCACCAAGCAAGCAAGGAAAACAAACGGATCCGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACTAAGTCAGAGCACCAAGCAAGCAAGGAAAACAAACGGATCCGGA  593

seq1  ACCAGTTCCAGGTGAGCTAGTAGTCCTGTGACGTCGACCAGGACAAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTTCCAGGTGAGCTAGTAGTCCTGTGACGTCGACCAGGACAAAACT  643

seq1  ACACAGTGGCTTCCCTTAGTCCAAGAGAAGCAAGGGTCAGAGGATTAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGTGGCTTCCCTTAGTCCAAGAGAAGCAAGGGTCAGAGGATTAATA  693

seq1  TAGTATCGATACTTCACAGTGTAAGGAGACTTGATTACAAATCAATGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATCGATACTTCACAGTGTAAGGAGACTTGATTACAAATCAATGATT  743

seq1  AACCATCATTCATTAAAGATCTACATGAGATTCTTCACTTCAGAATTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCATTCATTAAAGATCTACATGAGATTCTTCACTTCAGAATTTAT  793

seq1  AGGTTAAAAACTCCAATTGAAAAACCCCAAGGTGTTGCTTTAATAGAACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAAACTCCAATTGAAAAACCCCAAGGTGTTGCTTTAATAGAACA  843

seq1  GATGAATCTTATAAATCCAATAATGTTGTGCAAAAACACCAGTCACTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATCTTATAAATCCAATAATGTTGTGCAAAAACACCAGTCACTAAA  893

seq1  CACATGAAGGATTCTAACATTTATTTTATATATATATATAGTATATGTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAAGGATTCTAACATTTATTTTATATATATATATAGTATATGTTT  943

seq1  ATTATATATATATATAATTATTCTACCTGCATATATGCCTACATGCCAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATATATATAATTATTCTACCTGCATATATGCCTACATGCCAGA  993

seq1  AGAGGGCACCAGATCTCATTATTGATGGTTATAAGCCACCATGTTGTTGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCACCAGATCTCATTATTGATGGTTATAAGCCACCATGTTGTTGC  1043

seq1  TGGGAACTACACTCAGGACCTCTGGAAGAGCAGTTAGTGTAACCTCTGAG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTACACTCAGGACCTCTGGAAGAGCAGTTAGTGTAACCTCTGAG  1093

seq1  CCATTTCTCCAGCCCCCAAAGAATTC  1126
      ||||||||||||||||||||||||||
seq2  CCATTTCTCCAGCCCCCAAAGAATTC  1119

seq1: chr13_114984960_114985531
seq2: B6Ng01-061F23.g_70_641

seq1  GAATTCTGTGCCCCCCTCCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCCCCCCTCCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTCTCTCTCTTTCCTCCCCCCTCCTCTTTTCCTCTGTACAAGTATTTCA  100
      || |||||||| ||| |||| ||| |||||||||||||||||||||||||
seq2  TCCCTCTCTCTCTCCCCCCCTCTCTTCTTTTCCTCTGTACAAGTATTTCA  100

seq1  GATATATCAGGTGTGCACAAAATAGTGAGTGGTAATTTACTGGTTTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATATCAGGTGTGCACAAAATAGTGAGTGGTAATTTACTGGTTTCAGC  150

seq1  CCAAATGGTACTCATAGAAGAAAAAAGTTAATTGGTTTCTGCTGTGACAT  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCAAATGGTACTCATAGAACAAAAAAGTTAATTGGTTTCTGCTGTGACAT  200

seq1  ATACATAAATACTGTCTTCCCAGTTCACAAAAAGTTCCATTTTGCTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAATACTGTCTTCCCAGTTCACAAAAAGTTCCATTTTGCTTTGG  250

seq1  TGTTGAGGTTTAATCTTTTGATATGTAATGTAATGTTAAATATTGCCCCC  300
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTTGAGGTTTAATCTTTTGATATGTAATGTAATGTTAAAAATTGCCCCC  300

seq1  CCCCCAAGGCCCGGTTGCTCCTAGGAATGAGAGAATCTGCACATACAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGGCCCGGTTGCTCCTAGGAATGAGAGAATCTGCACATACAATG  350

seq1  TGACCTTGCTCCTTAATTTAAAACTATTGGTTAAATAAAGATGCTAACAG  400
      |||||||||| |||||||||||||||||||||||||||||||||||||| 
seq2  TGACCTTGCTTCTTAATTTAAAACTATTGGTTAAATAAAGATGCTAACAA  400

seq1  CTAATAGTTGGGAAGAAGAATCATAGGCAGAGTTTGGGGTTCCCGGGCTT  450
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAATTGGGAAGAAGAATCATAGGCAGAGTTTGGGGTTCCCGGGCTT  450

seq1  AGGGTCTGAGGAGACCACAAGGGAGGAGAGGAAGGCAGGGAAAGAAGATG  500
      |||||||||||||||||||| |||||||||||||||||||||| || |||
seq2  AGGGTCTGAGGAGACCACAATGGAGGAGAGGAAGGCAGGGAAATAATATG  500

seq1  CTATCTGGTAAGATCTCAGTAGCCGTGTGGGTTGGCTAATGGAGTTAAGA  550
      ||||||||||| |||||||| |||||||||||||||||||| ||||||||
seq2  CTATCTGGTAATATCTCAGTTGCCGTGTGGGTTGGCTAATGTAGTTAAGA  550

seq1  GTGACCCAGACAGAACATGGCA  572
      ||||| ||||||||||||||||
seq2  GTGACTCAGACAGAACATGGCA  572