BAC Information

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BAC

Clone NameB6Ng01-062D18
Chromosome13 (Build37)
Map Location 86,183,352 - 86,184,485
singlet/doubletsinglet
Overlap geneCox7c
Upstream geneLOC100042857, LOC100042862, Ccnh, Rasa1, LOC435373, LOC675662
Downstream geneLOC100042887, LOC100042893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062D18.bB6Ng01-062D18.g
ACCDH882694DH882695
length1,118948
definitionDH882694|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D18, 5' end.DH882695|Mus musculus domesticus DNA, BAC clone: B6Ng01-062D18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcttgcaattgtcctgtaggcatactaagtgttcaatcattt
taagaatgcagcaatctattttcacatacttactgtttttattttaaata
ctattatggttcaaaaacagtgataacaccctttcatcaaaacctctggt
atttttttctatttttccaccattggtggtattccaagagtgacactagg
gtctagcatattcagttgctacctttccctgccaacaagtaatccttaga
aagtctactatggcatttcaagtgttaagtagtgtttcattgctaacaaa
tactcactgagagaattactaatgggaactttcacttacctcccatatac
gatactcctgaaaaaatatttgtcctatatgctgttatattcccttggaa
ttattttaatactgttctaaggaagacttattggttagcagtactctcaa
atacaaaaccttcaattttaggttataaatctagaaagaaaatagtcaaa
gtacccaattcactagaacttattgattcttcacatgattaatcactgag
aaacctatctccaaaggctacttttaaatttaagttaggatgagtatgta
tattcaaattgttactacatgttcccaatttaaaaaacaagttaatgaca
cccagtaatttaagattataataaagtctaaatcatatgcaactgtgttt
tatgcatatgcattctcatttgggacatgtgtgagcttgcaaatagaaat
ccaacgttacctcaggtatcttcctctactgccttctaaagcaaagtctt
ttgttgaacccagagttcagtgttaatcctagttagcttagcaaaccagc
ttgaccagagattttatgcctcttgggtgttgggatcaaaagcaggctat
tttgcttgccagctcttgatcaggtactcaaggatatcaaagcagcctta
taagcaggtcctgaaagcatgtcatgcactgacccgtcaccccaactctc
atatatagtcctcatcaaacaaaagtatactatcacattccttatgcaga
gacgaggcatgatcttatgtcataggtatttacaatttttctagttaaag
agtcagagttatcaattt

gaattcattagagtggagtccaaatcagaattcagtttggtggtggtttg
cacagagacatgaatagaaagctagctactaaaaaggagacctgaggctg
aaagagtttactcagttcataaaacattacaaaaatttctacaaagtacc
atggttttatatatcattatggggacctgtaacacttgacattcaatgaa
taacttctatttaatctcaaattattttattttcttttagatattttctt
catgtacatttcaaatattctccctaaagtccattatatcctcccccctg
ccctgctccacaacctacccacacatgcttccttgccctggcatttcctc
tgtagtgggcatatgaacttcggaatatcaagggcttctcctcccactga
tgccagactaggccatcctcagctacatacacaactagagacacatttct
aggaggtactggttagttcatattgttgatcctcctataggtttacagac
cgctttagctccttgggtactttctctagctccttcattaggagctttgt
gttccatccaatagatgactctgagcatccacttctgtatttgccagaca
ctgacataatctcacaagagatagctatatcagggtcctgtcagctaaaa
cttgctgacatatgaaatagtgtctgggtttggtggttgtatataggatg
gatgcccaggtagggcagtctctggatggtcctttcttccatctaagctc
tgaactttttctctgtaactccctccatatttttgttccccattctagaa
ggaatgatgtatccaactttggtctttcttattcgtgagtttcatgtgtt
ttgcaattgtatcttgggtattctaagtttctgggataatatccgcttaa
cagtaagtgctatcaagtgtgttcatttgtgatggggttaattgttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_86183352_86184485
seq2: B6Ng01-062D18.b_44_1161

seq1  GAATTCTTTCTTGCAATTGTCCTGTAGGCATACTAAGTGTTCAATCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTTGCAATTGTCCTGTAGGCATACTAAGTGTTCAATCATTT  50

seq1  TAAGAATGCAGCAATCTATTTTCACATACTTACTGTTTTTATTTTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATGCAGCAATCTATTTTCACATACTTACTGTTTTTATTTTAAATA  100

seq1  CTATTATGGTTCAAAAACAGTGATAACACCCTTTCATCAAAACCTCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATGGTTCAAAAACAGTGATAACACCCTTTCATCAAAACCTCTGGT  150

seq1  ATTTTTTTCTATTTTTCCACCATTGGTGGTATTCCAAGAGTGACACTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTCTATTTTTCCACCATTGGTGGTATTCCAAGAGTGACACTAGG  200

seq1  GTCTAGCATATTCAGTTGCTACCTTTCCCTGCCAACAAGTAATCCTTAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGCATATTCAGTTGCTACCTTTCCCTGCCAACAAGTAATCCTTAGA  250

seq1  AAGTCTACTATGGCATTTCAAGTGTTAAGTAGTGTTTCATTGCTAACAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTACTATGGCATTTCAAGTGTTAAGTAGTGTTTCATTGCTAACAAA  300

seq1  TACTCACTGAGAGAATTACTAATGGGAACTTTCACTTACCTCCCATATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACTGAGAGAATTACTAATGGGAACTTTCACTTACCTCCCATATAC  350

seq1  GATACTCCTGAAAAAATATTTGTCCTATATGCTGTTATATTCCCTTGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTCCTGAAAAAATATTTGTCCTATATGCTGTTATATTCCCTTGGAA  400

seq1  TTATTTTAATACTGTTCTAAGGAAGACTTATTGGTTAGCAGTACTCTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAATACTGTTCTAAGGAAGACTTATTGGTTAGCAGTACTCTCAA  450

seq1  ATACAAAACCTTCAATTTTAGGTTATAAATCTAGAAAGAAAATAGTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAAACCTTCAATTTTAGGTTATAAATCTAGAAAGAAAATAGTCAAA  500

seq1  GTACCCAATTCACTAGAACTTATTGATTCTTCACATGATTAATCACTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAATTCACTAGAACTTATTGATTCTTCACATGATTAATCACTGAG  550

seq1  AAACCTATCTCCAAAGGCTACTTTTAAATTTAAGTTAGGATGAGTATGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTATCTCCAAAGGCTACTTTTAAATTTAAGTTAGGATGAGTATGTA  600

seq1  TATTCAAATTGTTACTACATGTTCCCAATTTAAAAAACAAGTTAATGACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAAATTGTTACTACATGTTCCCAATTTAAAAAACAAGTTAATGACA  650

seq1  CCCAGTAATTTAAGATTATAATAAAGTCTAAATCATATGCAACTGTGTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAATTTAAGATTATAATAAAGTCTAAATCATATGCAACTGTGTTT  700

seq1  TATGCATATGCATTCTCATTTGGGACATGTGTGAGCTTGCAAATAGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCATATGCATTCTCATTTGGGACATGTGTGAGCTTGCAAATAGAAAT  750

seq1  CCAACGTTACCTCAGGTATCTTCCTCTACTGCCTTCTAAAGCAAAGTCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGTTACCTCAGGTATCTTCCTCTACTGCCTTCTAAAGCAAAGTCTT  800

seq1  TTGTTGAACCCAGAGTTCAGTGTTAATCCTAGTTAGCTTAGCAAACCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAACCCAGAGTTCAGTGTTAATCCTAGTTAGCTTAGCAAACCAGC  850

seq1  TTGACCAGAGATTTTATGCCTCTTGGGTGTTGGGATCAAAAGCAGGCTAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGAGATTTTATGCCTCTTGGGTGTTGGGATCAAAAGCAGGCTAT  900

seq1  TTTGCTTGCCAGCTCTTGATCAGGGTACTCAAGGATATCAAAGCAGGCCT  950
      |||||||||||||||||||||| |||||||||||||||||||||| ||||
seq2  TTTGCTTGCCAGCTCTTGATCA-GGTACTCAAGGATATCAAAGCA-GCCT  948

seq1  TATAAGCAGGTCCTGAAAGCATGTCATGCACTGACCCGTCACCCCAACTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAGGTCCTGAAAGCATGTCATGCACTGACCCGTCACCCCAACTC  998

seq1  TCATATATAGTTCTCATCAAACAAAAGTAATAACTATCACATTCCTTATT  1050
      ||||||||||| |||||||||||||||||   |||||||||||||||| |
seq2  TCATATATAGTCCTCATCAAACAAAAGTA--TACTATCACATTCCTTA-T  1045

seq1  GCAGAGACGAGGCATTGAATCTTTATGTCATTAGTTTATTTACAATTTTT  1100
      |||||||||||||||   ||| |||||||||  |  ||||||||| ||||
seq2  GCAGAGACGAGGCAT--GATC-TTATGTCATAGG--TATTTACAA-TTTT  1089

seq1  TCTAGTATAAGAGTTCAAGAGTTTAATCCAATTT  1134
      ||||||  ||||||   ||||||  || ||||||
seq2  TCTAGTTAAAGAGT--CAGAGTT--AT-CAATTT  1118


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