BAC Information

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BAC

Clone NameB6Ng01-062E02
Chromosome13 (Build37)
Map Location 88,360,578 - 88,361,727
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC675707
Downstream geneLOC667230, EG435375, Edil3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062E02.bB6Ng01-062E02.g
ACCDH882710DH882711
length1,1371,076
definitionDH882710|Mus musculus domesticus DNA, BAC clone: B6Ng01-062E02, 5' end.DH882711|Mus musculus domesticus DNA, BAC clone: B6Ng01-062E02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacaggctgctctgcaggcagcagaaagaaagaatgacactggt
tttggtatgaatatcaaaaacctcaaagctaaacctactgacttactttc
tccaacaaagccacacctattttaataaagccaaacattcaatacaaggg
ggacatttttaatcataatactacacatagtatgtctatttgaagtggag
cttggccagcagagagactgtaatgggattagttttagagttaagaaggt
ggggccaccttactctcaagatgattccatcacttgccttgttattacca
ctgggcaagattaagaccagtaccataatattggggcaaattgaggccat
ttaaagggccatgagtacttgaaaagaaggtttaaaaagcaagacaatgg
gacagttagaatagtatataaaaatttcaaaaaaaggggaaaaaaaccta
tcattgtgtagaaaacagttatcttgatgtgatcagtgattaaaaagggt
cagggtgttctcaaaaccaagtcatgggttggagcaggtaagctttctga
aaaaagaaattgaaaaccaaaactaagctacaattgtaaatggaaacttt
ttttttttaaacaattcagcaaaacagtgaaatggtccctattggaaaac
tgagccagtcaggtttctcagtgccaaatgttagatatattgtatcagaa
tttggtctttcttctggttggttttgttcttattttagtctaatttgctt
ttcactgccataactcatttttagggtgagaaagtttactgtgtaatctt
ctattccagaagtatataaattatttttatgccacactttaaaaaattgc
cttgaaatgaaatgtttgacataactattgaagagtgttgaaacataatt
acaatggggacttttgaagttggagtgtatgaatctcaagtacccatgac
cagcaggggaagaatattttgacatgaatgtgaaatgttcctcaaagttt
atgtgtttaaaatcatagtttaagcataggtgctctttagggaagttata
acttatacagtagttacagggggaggagttcatccctgagatcatattaa
gactgcatgacaagttttaaataattttatggcatca
gaattccatgatctgtccattgctgagagtagagtattgaagtctccaac
tattatggtatgaggtgcaatgtgtactttgaggtttagtaaagttcctt
tataaatgtaggtgcccttgcatttgaagtatagatgttcagaatcaaga
tttcttggtagatttttttcttccttattatttgttcttccttatctttt
ttgataacttttaattggaagttgattttattagatattagaatggctac
tccagcgtgtttctttggaccattttcttgggaatttttttttcagagtt
ttactcataagtagtgtctgtctttgtcattgcggtgcatttcctgtagg
cagaaaaatgctgagtcctatttacgtatccagtttcttagtctatgtct
ttttattggggaattgagtccattgatgttaggagatattaaggaatagt
tattgttgcttccttttatttttgttattagaataggaattatgtttgtg
tgcccatctttttctgtgttcgttgagagattactttcttgctttatcca
gggtatggtttccttccttttgttggatttttccaactttttcctttgta
gggctgtatttgaggaaaaattctgtgtaaatttgattttctcatggaat
atcttgttttctccatttattttaattgagagttttgctgggtatagtgg
cctggggctggcatttgtgttctcttagtgtctgtatgacatatgcccag
gatcttctagctttcataatctctttgagaagtctggtgtaatttctgat
aggtctgcctttatatgtacttgaccttttttccttactacttttaatat
cttttctttgttttgtacatttggtgttttgattttttttccatttttta
ttaggtatttaactcatttacatttccaatgctataccaaaagtccccaa
accactcacccccactcccttggccaactcacttctcccttttggacctt
tgtattcctctgtactggggcaatagagttgcaagacaatgggccttcct
ttctagatggccaactaggccaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_88360578_88361727
seq2: B6Ng01-062E02.b_45_1181

seq1  GAATTCTACAGGCTGCTCTGCAGGCAGCAGAAAGAAAGAATGACACTGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAGGCTGCTCTGCAGGCAGCAGAAAGAAAGAATGACACTGGT  50

seq1  TTTGGTATGAATATCAAAAACCTCAAAGCTAAACCTACTGACTTACTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTATGAATATCAAAAACCTCAAAGCTAAACCTACTGACTTACTTTC  100

seq1  TCCAACAAAGCCACACCTATTTTAATAAAGCCAAACATTCAATACAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACAAAGCCACACCTATTTTAATAAAGCCAAACATTCAATACAAGGG  150

seq1  GGACATTTTTAATCATAATACTACACATAGTATGTCTATTTGAAGTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTTTAATCATAATACTACACATAGTATGTCTATTTGAAGTGGAG  200

seq1  CTTGGCCAGCAGAGAGACTGTAATGGGATTAGTTTTAGAGTTAAGAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCAGCAGAGAGACTGTAATGGGATTAGTTTTAGAGTTAAGAAGGT  250

seq1  GGGGCCACCTTACTCTCAAGATGATTCCATCACTTGCCTTGTTATTACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCCACCTTACTCTCAAGATGATTCCATCACTTGCCTTGTTATTACCA  300

seq1  CTGGGCAAGATTAAGACCAGTACCATAATATTGGGGCAAATTGAGGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAAGATTAAGACCAGTACCATAATATTGGGGCAAATTGAGGCCAT  350

seq1  TTAAAGGGCCATGAGTACTTGAAAAGAAGGTTTAAAAAGCAAGACAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGGGCCATGAGTACTTGAAAAGAAGGTTTAAAAAGCAAGACAATGG  400

seq1  GACAGTTAGAATAGTATATAAAAATTTCAAAAAAAGGGGAAAAAAACCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTAGAATAGTATATAAAAATTTCAAAAAAAGGGGAAAAAAACCTA  450

seq1  TCATTGTGTAGAAAACAGTTATCTTGATGTGATCAGTGATTAAAAAGGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTGTAGAAAACAGTTATCTTGATGTGATCAGTGATTAAAAAGGGT  500

seq1  CAGGGTGTTCTCAAAACCAAGTCATGGGTTGGAGCAGGTAAGCTTTCTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTTCTCAAAACCAAGTCATGGGTTGGAGCAGGTAAGCTTTCTGA  550

seq1  AAAAAGAAATTGAAAACCAAAACTAAGCTACAATTGTAAATGGAAACTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAATTGAAAACCAAAACTAAGCTACAATTGTAAATGGAAACTTT  600

seq1  TTTTTTTTAAACAATTCAGCAAAACAGTGAAATGGTCCCTATTGGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAACAATTCAGCAAAACAGTGAAATGGTCCCTATTGGAAAAC  650

seq1  TGAGCCAGTCAGGTTTCTCAGTGCCAAATGTTAGATATATTGTATCAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCAGTCAGGTTTCTCAGTGCCAAATGTTAGATATATTGTATCAGAA  700

seq1  TTTGGTCTTTCTTCTGGTTGGTTTTGTTCTTATTTTAGTCTAATTTGCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTCTTTCTTCTGGTTGGTTTTGTTCTTATTTTAGTCTAATTTGCTT  750

seq1  TTCACTGCCATAACTCATTTTTAGGGTGAGAAAGTTTACTGTGTAATCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGCCATAACTCATTTTTAGGGTGAGAAAGTTTACTGTGTAATCTT  800

seq1  CTATTCCAGAAGTATATAAATTATTTTTATGCCACACTTTAAAAAATTGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCCAGAAGTATATAAATTATTTTTATGCCACACTTTAAAAAATTGC  850

seq1  CTTGAAATGAAATGTTTGACATAACTATTGAAGAGTGTTGAAACATAATT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAATGAAATGTTTGACATAACTATTGAAGAGTGTTGAAACATAATT  900

seq1  ACAATGGGGACTTTTGAAGTTGGAGTGTATGAATCTCAAGTACCCATGAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGGGGACTTTTGAAGTTGGAGTGTATGAATCTCAAGTACCCATGAC  950

seq1  CAGCAGGGGAAGAATATTTTGACATGAATGTGAAATGTTCCCCAAAAGTT  1000
      ||||||||||||||||||||||||||||||||||||||||| | ||||||
seq2  CAGCAGGGGAAGAATATTTTGACATGAATGTGAAATGTTCCTC-AAAGTT  999

seq1  TATGTGTTTAAAAATCATAGTTTAAGCATAGGGTGCTCTTTAGGGAAGTT  1050
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  TATGTGTTT-AAAATCATAGTTTAAGCATA-GGTGCTCTTTAGGGAAGTT  1047

seq1  ATAAACCTATACAAGGTAGTTACAGTGGAGGAAGTTCATCACTGAGGATC  1100
      || ||| ||||||  |||||||||| ||  | |||||||| |||| ||||
seq2  AT-AACTTATACA--GTAGTTACAGGGGGAGGAGTTCATCCCTGA-GATC  1093

seq1  AATATTAAGACTGCATGACCAAGTATTTAAAATAATTTTAATGTGCATCA  1150
       ||||||||||||||||| ||||  ||| |||||||||| ||| ||||||
seq2  -ATATTAAGACTGCATGA-CAAG--TTTTAAATAATTTT-ATG-GCATCA  1137