BAC Information

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BAC

Clone NameB6Ng01-063C20
Chromosome13 (Build37)
Map Location 8,054,921 - 8,235,190
singlet/doubletdoublet
Overlap geneLOC382722, Adarb2
Upstream geneLOC667611, EG623516, LOC791083
Downstream geneEG666941, Wdr37, LOC100039632, Idi1, EG382723, LOC100039655, Idi2, Gtpbp4, LOC667721, Larp5, EG667727
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063C20.bB6Ng01-063C20.g
ACCDH883351DH883352
length1,102406
definitionDH883351|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C20, 5' end.DH883352|Mus musculus domesticus DNA, BAC clone: B6Ng01-063C20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,234,015 - 8,235,190)(8,054,921 - 8,055,332)
sequence
gaattccaattgttttatgttctattttaaaatgtgcattatatgtcaat
ttatcttcttatttttcttctttgaggtcctagcgcacataaatgtctaa
ccaaccattagcttttattagtaaagttaaagcgaatggcagcaatatga
tcatcataaagcactgacctgttttattggatataagatgggtgtgtata
ggattagccttgtgcttttgttttactctaattgctaaggagctggaatt
gtcctgctcttcacagaagtgcccacaatacctttcctctcctaaaagcc
cctgactcttcaaaggtatgcttgttgacatcactgaactcatgtccact
actgaccaaaagctgagattccatgtatgtgaaatctgtataagaattga
cagagagtgcagggcagagtagaagtctcagaattctgccttctccacac
ctctttcccatgagtcattttccccactgtgagcttagggaagggaaacc
agatctttatagtgccaccactgttccttttcaagacaacagacaaagat
ggtatccagtacagcgtcttcattttcttttcttttttgtttgtttattt
gtttgtttgtttttgagatagggtttctctgaatagccttggctgttctg
gaactcactctgtagactaggctgagccttgaactcagaaatctgcctgc
ctctgcctcccaagtgctggaattaaagacgtgcaccaccactgcccagc
cttcatttcttttgattgtctcaactaaatttattttaaagacaaaatta
gaggcaaaattaaatgaggtttacagctttataaagtaacttagaaaata
cagattgagttcctctgctgttatcttcctttctatgtataaggtcagag
attctactccatcagacaaatccaacactacttacagagttctcacattt
taaaagtgtaatattttataattgtttaaacatttgatacatgtacacaa
caccatttgatcatattcatcctggtaaatttcctctcctgactcctccc
tagctctatcctctctgcaccctcaaaacttatggtcaactatcatctat
ca

actacgtgaccaatactgaactttgaactcctcatcctcttctcttcggt
ttctaaaagttgggattgctggcgtttgctaccatgcccggctcacaggg
tacttcatgtcggttcccttcatttgaacgataaaacatttttgaaaaga
atatttcatttccacagacattgttgagcttacatcaagtagaagaattt
gtaagttaagatcattatgcaaccctttgaaatttgtaagatctaaaggg
taggaaagatttagaaagaaaaggaaagaaaaggaaaggaaaggaaagga
aaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaaggaaagga
aaggaaaggaaaggaaaggaaaggaaaggaaaagggaagggagggaggga
gggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_8234015_8235190
seq2: B6Ng01-063C20.b_45_1146 (reverse)

seq1  TGATAGATGATAGATAGATGGATGGAAAATGATAGAAAGATAATAGATGG  50
                                                        
seq2  --------------------------------------------------  0

seq1  ATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAACATAAAGT  100
                             ||||||| ||||| | || ||| ||||
seq2  ----------------------TGATAGAT-GATAG-TTGACCAT-AAGT  25

seq1  TTTGAGGGTGCAGAGAGGATAGAGCTA-GGAGGAGTCA-GAGA-GAAAAT  147
      ||||||||||||||||||||||||||| |||||||||| |||| |||| |
seq2  TTTGAGGGTGCAGAGAGGATAGAGCTAGGGAGGAGTCAGGAGAGGAAATT  75

seq1  TAACAGGATGAATATGATCAAAATGTGTTGTGTACATGTATCAAATGTTT  197
      || |||||||||||||||||||  ||||||||||||||||||||||||||
seq2  TACCAGGATGAATATGATCAAATGGTGTTGTGTACATGTATCAAATGTTT  125

seq1  AAACAATTAATAAAATATTACACTTTTAAAATGTGAGAACTCTGGTAAGT  247
      |||||||| |||||||||||||||||||||||||||||||||| ||||||
seq2  AAACAATT-ATAAAATATTACACTTTTAAAATGTGAGAACTCT-GTAAGT  173

seq1  AGTGTTGGATTTGTCTGATGGAGTAGAATCTCTGACCTTATACATAGGAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGTGTTGGATTTGTCTGATGGAGTAGAATCTCTGACCTTATACATAGAAA  223

seq1  GGAAGATAACAGCAGAGGAACTCAATCTGTATTTTCTAAGTTACTTTATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATAACAGCAGAGGAACTCAATCTGTATTTTCTAAGTTACTTTATA  273

seq1  AAGCTGTAAACCTCATTTAATTTTGCCTCTAATTTTGTCTTTAAAATAAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTAAACCTCATTTAATTTTGCCTCTAATTTTGTCTTTAAAATAAA  323

seq1  TTTAGTTGAGACAATCAAAAGAAATGAAGGCTGGGCAGTGGTGGTGCACG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGAGACAATCAAAAGAAATGAAGGCTGGGCAGTGGTGGTGCACG  373

seq1  TCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAATTCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCA  423

seq1  AGGCTCAGCCTAGTCTACAGAGTGAGTTCCAGAACAGCCAAGGCTATTCA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCAGCCTAGTCTACAGAGTGAGTTCCAGAACAGCCAAGGCTATTCA  473

seq1  GAGAAACCCTATCTCAAAAACAAACAAACAAATAAACAAACAAAAAAGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAACCCTATCTCAAAAACAAACAAACAAATAAACAAACAAAAAAGAA  523

seq1  AAGAAAATGAAGACGCTGTACTGGATACCATCTTTGTCTGTTGTCTTGAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATGAAGACGCTGTACTGGATACCATCTTTGTCTGTTGTCTTGAA  573

seq1  AAGGAACAGTGGTGGCACTATAAAGATCTGGTTTCCCTTCCCTAAGCTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAACAGTGGTGGCACTATAAAGATCTGGTTTCCCTTCCCTAAGCTCA  623

seq1  CAGTGGGGAAAATGACTCATGGGAAAGAGGTGTGGAGAAGGCAGAATTCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGGAAAATGACTCATGGGAAAGAGGTGTGGAGAAGGCAGAATTCT  673

seq1  GAGACTTCTACTCTGCCCTGCACTCTCTGTCAATTCTTATACAGATTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTCTACTCTGCCCTGCACTCTCTGTCAATTCTTATACAGATTTCA  723

seq1  CATACATGGAATCTCAGCTTTTGGTCAGTAGTGGACATGAGTTCAGTGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATGGAATCTCAGCTTTTGGTCAGTAGTGGACATGAGTTCAGTGAT  773

seq1  GTCAACAAGCATACCTTTGAAGAGTCAGGGGCTTTTAGGAGAGGAAAGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAACAAGCATACCTTTGAAGAGTCAGGGGCTTTTAGGAGAGGAAAGGT  823

seq1  ATTGTGGGCACTTCTGTGAAGAGCAGGACAATTCCAGCTCCTTAGCAATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGCACTTCTGTGAAGAGCAGGACAATTCCAGCTCCTTAGCAATT  873

seq1  AGAGTAAAACAAAAGCACAAGGCTAATCCTATACACACCCATCTTATATC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTAAAACAAAAGCACAAGGCTAATCCTATACACACCCATCTTATATC  923

seq1  CAATAAAACAGGTCAGTGCTTTATGATGATCATATTGCTGCCATTCGCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAAAACAGGTCAGTGCTTTATGATGATCATATTGCTGCCATTCGCTT  973

seq1  TAACTTTACTAATAAAAGCTAATGGTTGGTTAGACATTTATGTGCGCTAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTACTAATAAAAGCTAATGGTTGGTTAGACATTTATGTGCGCTAG  1023

seq1  GACCTCAAAGAAGAAAAATAAGAAGATAAATTGACATATAATGCACATTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCAAAGAAGAAAAATAAGAAGATAAATTGACATATAATGCACATTT  1073

seq1  TAAAATAGAACATAAAACAATTGGAATTC  1176
      |||||||||||||||||||||||||||||
seq2  TAAAATAGAACATAAAACAATTGGAATTC  1102


seq1: chr13_8054921_8055332
seq2: B6Ng01-063C20.g_67_478

seq1  GAATTCACTACGTGACCAATACTGAACTTTGAACTCCTCATCCTCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTACGTGACCAATACTGAACTTTGAACTCCTCATCCTCTTCTC  50

seq1  TTCGGTTTCTAAAAGTTGGGATTGCTGGCGTTTGCTACCATGCCCGGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGTTTCTAAAAGTTGGGATTGCTGGCGTTTGCTACCATGCCCGGCTC  100

seq1  ACAGGGTACTTCATGTCGGTTCCCTTCATTTGAACGATAAAACATTTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTACTTCATGTCGGTTCCCTTCATTTGAACGATAAAACATTTTTG  150

seq1  AAAAGAATATTTCATTTCCACAGACATTGTTGAGCTTACATCAAGTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAATATTTCATTTCCACAGACATTGTTGAGCTTACATCAAGTAGAA  200

seq1  GAATTTGTAAGTTAAGATCATTATGCAACCCTTTGAAATTTGTAAGATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGTAAGTTAAGATCATTATGCAACCCTTTGAAATTTGTAAGATCT  250

seq1  AAAGGGTAGGAAAGATTTAGAAAGAAAAGGAAAGAAAAGGAAAGGAAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTAGGAAAGATTTAGAAAGAAAAGGAAAGAAAAGGAAAGGAAAGG  300

seq1  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGG  350

seq1  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGGGAAGGGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAGGAAAAGGGAAGGGAGG  400

seq1  GAGGGAGGGAGG  412
      ||||||||||||
seq2  GAGGGAGGGAGG  412


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