BAC Information

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BAC

Clone NameB6Ng01-063J06
Chromosome13 (Build37)
Map Location 84,035,450 - 84,170,570
singlet/doubletdoublet
Overlap gene2810049E08Rik, LOC100043119, LOC667081
Upstream geneLOC667018, Mef2c, LOC100043111, LOC623241, LOC432789
Downstream geneLOC667101, Tmem161b, LOC666795, LOC667111, LOC382786, LOC100042841, LOC100042851
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063J06.bB6Ng01-063J06.g
ACCDH883627DH883628
length1,0981,089
definitionDH883627|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J06, 5' end.DH883628|Mus musculus domesticus DNA, BAC clone: B6Ng01-063J06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,169,435 - 84,170,570)(84,035,450 - 84,036,551)
sequence
gaattctaggttctgtgataaaggtgaacatctataagtcatagccattg
gcttcaggaagctcacagtctaagaagagctgctactttctctgccaact
atgcccaatcaaaaactgaataattacctctcaattccaacagggctttt
gtataatccctagagcattttccctttcttacgtcatgtcccagtcactg
catgtctttacagaatgcagtgtaatgttttgctattcgtatacgctgtg
tgttaatcaaggcagcatcttttggttatctgttatttcaaatagttttc
atttctttgagatacgagcattaaaaacactttcttctggttattttaaa
taatttggtacaccattgttaaggaggatcacccattgtataatagaagg
gtaaaacgcatcgtcttatctggctggagtttgcacccgttcaccatcta
ccctctgcatcatccttccctctccgctgccttgcctggtaaccacaatg
cacaaatctacatctatgcactcacctgtaaatggattaaatcccataac
atttctcttctagatagattcctttaaagtcattctgtcttgaggaatgg
aaaatgaagacagctagagagagtggattaaaatctgttacctgtacact
gtgtgccaattactgctttcagatactatgcatccattcttttaatttaa
tactaaaaaacaataccatgggttggattatgaaattttgcctttttggg
tgaaacaaaacaacatattctccattctcagaatggtgaaattaccttgt
ttgagaccacatacccaggaagtactggagatgggatttcagttattaac
aaaggcagaaagtacacttaatttgtttaattgccaatcctaaataagta
ctttgagtatcttgctttttaaggataacttctctctcaaatatgttttc
tgtgacattggactcaaacaatctagttgtagatgctcatagacaagact
gtaccaattctctatgcatagcaagaaagacacagtcactctagtttgag
tgtgtactacaaagcagaaattttttcatttttattagattagctcat
gaattccatggacaagaaacgtgagcatcacatatagtggttaaattgct
caagctcagggaacgagaaaattgctctttaaaatcaatgcaggaaggaa
atgattcattttacataggggaaggtagaggtgacacagattacctagaa
ttctatacccagaaaaaataacttttaaagagaaagatgtttcaaacata
ctaaataaagattttgtcattcacaaaccagcaccctagaaaacaaagag
aagctgtgtgtagtagtgcacacctatgtttctagcactcaggatgctac
tactgaagcaaggattgggagtactgtcctgcttgaactagtaagactct
gtctcaaaacaacaaacaactcaaagtcataaataaaacagaaactaaaa
cttcaaacatgaacagaaaaatcttgaaattgtttaggaaagaaggatca
tacaggaatgaaaagaatgagaaatagctatttcataaataagacattac
taattattagtctattacctaacatcacttaatgaaattattaatttgaa
attttacttgtatatattatgtaaaggtctctcagaactcaacagtaagt
ttagaaagggtgggagatttccatcacaaatgattcataattgaagagct
ggaacttcgtaattccctgaatttatcattaaacattttatacattatca
tcttcctacttaatgacatacaaatattatgtctcgataagacaagaaaa
tcaagaagaaggaagaccaacgtgtggatacttcattcctccctagaata
tggaacaaaatacccatagaaggagttacagagacaaagtttggagatag
acgaaaggatggactatccagagactaccccacctggggatccatcccat
tatcagccaccaaacccagagactatacatatgccagcagatttgctgaa
gggactctgataagctgtctcatataaagctatgctagtgctagcaatac
agagtggatgctgacagtcatctatagatggaacacatgctccagtagaa
gagctagagtaaatacccagtacctgagggtctgcaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_84169435_84170570
seq2: B6Ng01-063J06.b_47_1144 (reverse)

seq1  ATGAGCTAAATACCTAATAAAAAATGGAAAAAAAAATTTTCCTGCTTTTG  50
      ||||||||   | ||||| |||||||    |||||||||  |||||||  
seq2  ATGAGCTA---ATCTAAT-AAAAATG----AAAAAATTT--CTGCTTT--  38

seq1  GTAGTACACACTCAAAACCTTAGAAGTGACTGTTGGTTCTTTTCCTTGCT  100
      ||||||||||||||||    ||| |||||||||    |||||  ||||||
seq2  GTAGTACACACTCAAA---CTAG-AGTGACTGT---GTCTTT--CTTGCT  79

seq1  ATTTGCATAAGAGGAATTGGTACAGTTCTTGTCCTTATTGGAGGCATCTA  150
      |  ||||| ||| |||||||||||| |||||||  |||  || |||||||
seq2  A--TGCAT-AGA-GAATTGGTACAG-TCTTGTC--TAT--GA-GCATCTA  119

seq1  CAACTAGAATTGTTTGAGGTCCAATGGTCACAAGAAAACATATTTGAGGA  200
      ||||||| ||||||||| ||||||| ||||| ||||||||||||||| ||
seq2  CAACTAG-ATTGTTTGA-GTCCAAT-GTCAC-AGAAAACATATTTGA-GA  164

seq1  GAGGAAGTTATCCTTAAAAAAGCAAGATACTCAAAGTACTTATTTAGGAT  250
      || |||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GA-GAAGTTATCCTT-AAAAAGCAAGATACTCAAAGTACTTATTTAGGAT  212

seq1  TGGCAATTAAACAAATTAAGTGTACTTTCTGCCTTTGTTAATAACTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAATTAAACAAATTAAGTGTACTTTCTGCCTTTGTTAATAACTGAAA  262

seq1  TCCCATCTCCAGTACTTCCTGGGTATGTGGTCTCAAACAAGGTAATTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTCCAGTACTTCCTGGGTATGTGGTCTCAAACAAGGTAATTTCA  312

seq1  CCATTCTGAGAATGGAGAATATGTTGTTTTGTTTCACCCAAAAAGGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGAGAATGGAGAATATGTTGTTTTGTTTCACCCAAAAAGGCAAA  362

seq1  ATTTCATAATCCAACCCATGGTATTGTTTTTTAGTATTAAATTAAAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATAATCCAACCCATGGTATTGTTTTTTAGTATTAAATTAAAAGAA  412

seq1  TGGATGCATAGTATCTGAAAGCAGTAATTGGCACACAGTGTACAGGTAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGCATAGTATCTGAAAGCAGTAATTGGCACACAGTGTACAGGTAAC  462

seq1  AGATTTTAATCCACTCTCTCTAGCTGTCTTCATTTTCCATTCCTCAAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTAATCCACTCTCTCTAGCTGTCTTCATTTTCCATTCCTCAAGAC  512

seq1  AGAATGACTTTAAAGGAATCTATCTAGAAGAGAAATGTTATGGGATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGACTTTAAAGGAATCTATCTAGAAGAGAAATGTTATGGGATTTAA  562

seq1  TCCATTTACAGGTGAGTGCATAGATGTAGATTTGTGCATTGTGGTTACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTTACAGGTGAGTGCATAGATGTAGATTTGTGCATTGTGGTTACCA  612

seq1  GGCAAGGCAGCGGAGAGGGAAGGATGATGCAGAGGGTAGATGGTGAACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGGCAGCGGAGAGGGAAGGATGATGCAGAGGGTAGATGGTGAACGG  662

seq1  GTGCAAACTCCAGCCAGATAAGACGATGCGTTTTACCCTTCTATTATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAACTCCAGCCAGATAAGACGATGCGTTTTACCCTTCTATTATACA  712

seq1  ATGGGTGATCCTCCTTAACAATGGTGTACCAAATTATTTAAAATAACCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGATCCTCCTTAACAATGGTGTACCAAATTATTTAAAATAACCAG  762

seq1  AAGAAAGTGTTTTTAATGCTCGTATCTCAAAGAAATGAAAACTATTTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGTGTTTTTAATGCTCGTATCTCAAAGAAATGAAAACTATTTGAA  812

seq1  ATAACAGATAACCAAAAGATGCTGCCTTGATTAACACACAGCGTATACGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAGATAACCAAAAGATGCTGCCTTGATTAACACACAGCGTATACGA  862

seq1  ATAGCAAAACATTACACTGCATTCTGTAAAGACATGCAGTGACTGGGACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAAAACATTACACTGCATTCTGTAAAGACATGCAGTGACTGGGACA  912

seq1  TGACGTAAGAAAGGGAAAATGCTCTAGGGATTATACAAAAGCCCTGTTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTAAGAAAGGGAAAATGCTCTAGGGATTATACAAAAGCCCTGTTGG  962

seq1  AATTGAGAGGTAATTATTCAGTTTTTGATTGGGCATAGTTGGCAGAGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGAGGTAATTATTCAGTTTTTGATTGGGCATAGTTGGCAGAGAAA  1012

seq1  GTAGCAGCTCTTCTTAGACTGTGAGCTTCCTGAAGCCAATGGCTATGACT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGCTCTTCTTAGACTGTGAGCTTCCTGAAGCCAATGGCTATGACT  1062

seq1  TATAGATGTTCACCTTTATCACAGAACCTAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||
seq2  TATAGATGTTCACCTTTATCACAGAACCTAGAATTC  1098

seq1: chr13_84035450_84036551
seq2: B6Ng01-063J06.g_68_1156

seq1  GAATTCCATGGACAAGAAACGTGAGCATCACATATAGTGGTTAAATTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGGACAAGAAACGTGAGCATCACATATAGTGGTTAAATTGCT  50

seq1  CAAGCTCAGGGAACGAGAAAATTGCTCTTTAAAATCAATGCAGGAAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCAGGGAACGAGAAAATTGCTCTTTAAAATCAATGCAGGAAGGAA  100

seq1  ATGATTCATTTTACATAGGGGAAGGTAGAGGTGACACAGATTACCTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTCATTTTACATAGGGGAAGGTAGAGGTGACACAGATTACCTAGAA  150

seq1  TTCTATACCCAGAAAAAATAACTTTTAAAGAGAAAGATGTTTCAAACATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATACCCAGAAAAAATAACTTTTAAAGAGAAAGATGTTTCAAACATA  200

seq1  CTAAATAAAGATTTTGTCATTCACAAACCAGCACCCTAGAAAACAAAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATAAAGATTTTGTCATTCACAAACCAGCACCCTAGAAAACAAAGAG  250

seq1  AAGCTGTGTGTAGTAGTGCACACCTATGTTTCTAGCACTCAGGATGCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGTGTGTAGTAGTGCACACCTATGTTTCTAGCACTCAGGATGCTAC  300

seq1  TACTGAAGCAAGGATTGGGAGTACTGTCCTGCTTGAACTAGTAAGACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGCAAGGATTGGGAGTACTGTCCTGCTTGAACTAGTAAGACTCT  350

seq1  GTCTCAAAACAACAAACAACTCAAAGTCATAAATAAAACAGAAACTAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCAAAACAACAAACAACTCAAAGTCATAAATAAAACAGAAACTAAAA  400

seq1  CTTCAAACATGAACAGAAAAATCTTGAAATTGTTTAGGAAAGAAGGATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAACATGAACAGAAAAATCTTGAAATTGTTTAGGAAAGAAGGATCA  450

seq1  TACAGGAATGAAAAGAATGAGAAATAGCTATTTCATAAATAAGACATTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAATGAAAAGAATGAGAAATAGCTATTTCATAAATAAGACATTAC  500

seq1  TAATTATTAGTCTATTACCTAACATCACTTAATGAAATTATTAATTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAGTCTATTACCTAACATCACTTAATGAAATTATTAATTTGAA  550

seq1  ATTTTACTTGTATATATTATGTAAAGGTCTCTCAGAACTCAACAGTAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTTGTATATATTATGTAAAGGTCTCTCAGAACTCAACAGTAAGT  600

seq1  TTAGAAAGGGTGGGAGATTTCCATCACAAATGATTCATAATTGAAGAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAGGGTGGGAGATTTCCATCACAAATGATTCATAATTGAAGAGCT  650

seq1  GGAACTTCGTAATTCCCTGAATTTATCATTAAACATTTTATACATTATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTCGTAATTCCCTGAATTTATCATTAAACATTTTATACATTATCA  700

seq1  TCTTCCTACTTAATGACATACAAATATTATGTCTCGATAAGACAAGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTACTTAATGACATACAAATATTATGTCTCGATAAGACAAGAAAA  750

seq1  TCAAGAAGAAGGAAGACCAACGTGTGGATACTTCATTCCTCCCTAGAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGAAGGAAGACCAACGTGTGGATACTTCATTCCTCCCTAGAATA  800

seq1  TGGAACAAAATACCCATAGAAGGAGTTACAGAGACAAAGTTTGGAGATAA  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TGGAACAAAATACCCATAGAAGGAGTTACAGAGACAAAGTTTGGAGAT-A  849

seq1  GACGAAAGGATGGACTATCCAGAGACTACCCCACCTGGGGATCCATCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGAAAGGATGGACTATCCAGAGACTACCCCACCTGGGGATCCATCCCA  899

seq1  TTATCAGCCACCAAACCCAGAGACTATTACATATGCCAGCAAGATTTGCT  950
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  TTATCAGCCACCAAACCCAGAGACTA-TACATATGCCAGC-AGATTTGCT  947

seq1  GAAGGGACTCTGATATAGCTGTCTCATATAAAGCTATGCTAGTGCCTAGC  1000
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  GAAGGGACTCTGATA-AGCTGTCTCATATAAAGCTATGCTAGTG-CTAGC  995

seq1  AAATACAGAAGTGGATGCTGACAGTCATCTATAGGATGGAACACAGGGCT  1050
       ||||||| |||||||||||||||||||||||| |||||||||||  |||
seq2  -AATACAG-AGTGGATGCTGACAGTCATCTATA-GATGGAACACA-TGCT  1041

seq1  CCCAGTAGAAGAGCTAGAGAAAATACCCAAGTAGCTGAAGGGGTCTGCAA  1100
       |||||||||||||||||| |||||||| |||| ||||  ||||||||| 
seq2  -CCAGTAGAAGAGCTAGAGTAAATACCC-AGTACCTGA--GGGTCTGCAC  1087

seq1  CC  1102
      ||
seq2  CC  1089