BAC Information

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BAC

Clone NameB6Ng01-063L13
Chromosome13 (Build37)
Map Location 117,998,469 - 117,999,527
singlet/doubletsinglet
Overlap genenone
Upstream geneIsl1, EG668276, Gm280, LOC100041169, Parp8, LOC668288, LOC623312
Downstream geneEmb, EG623365, LOC382807, Hcn1, LOC100041695, LOC674926
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063L13.bB6Ng01-063L13.g
ACCDH883726DH883727
length1,0531,135
definitionDH883726|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L13, 5' end.DH883727|Mus musculus domesticus DNA, BAC clone: B6Ng01-063L13, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctccatactttatagacgcatatcatgtgatattttctctaatat
aaaaatcctaacattattttcaataatagctaattcccatctccaccctc
tttttcatgtccccaacccccacccccaggactgcatcacacacattcta
ctcactaacagcatactgtgataaaggtaaatgcaaaggcagattttatg
acattgttttccaagcacaacaaaaaaaaaacattatataaaaaaaccca
tgtgctggacagtggtggtgcagacctttaaacctaggactcaggagaca
agaggcaggcagatctctgatttcagggctagcctagtctacagaatgag
ttcaaggacagccaagtctacacagaaaacctttttctgtctcggaaaca
aagcaaaactgaatccacgtgcagggcatggtggcacatgactttaatct
gggcatttgggaggcaaacggaggcagatctgtatgagtttaaggtcgat
ctggtcaacatagtgcatttcaagccagtcagagttacatggtactatag
ttagagtttgtttctctctctctctctctttttgtaatttatttatttat
tatatgtatgtaaatacactgtagctgttttcagacacaccagaagaggg
agtctgatctcattacagatggttgtgagccaccatgtggttgcagggat
ttgaactcaggacctttggaagagcagtcagtactcttaaccgctgagcc
atctctccagcctgagtttgtttctcttgatgcaaggaaatattatgatc
aaaaaacaagctggggagaaagggtttatttcgattacacttccatatca
ctgttcatcaccaggaggaactcaagcagggaaggaacttggaggcagga
gctgatgcagagaccacagggagggctgctactggcttgctctatatgcc
ttagtcagtttgctttcttatagaacccaggaccatcctctcagaagtgg
cacaccacaacgggctgggcctcctcaatgatcactaataaagaaaatgc
ctc
gaattctcatctgtggaatactgaggggctgagaagaacctgaaaaaatg
ttcagcatttttttttcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacttcacaccagtcagaatggctaagctcaaaaattcaggtgacag
cagatgctgacgaggatgtggagaaagataaacactcctccattgctggt
gggattgcaggcttgtacaaccactctggaaataagtctggtggttcctc
agaaaattggacatagtactaccagaagatccagtaattcctctcctggg
catatacccagaagaagttccaaccggtaagaaggacacatgctccattg
tgttcgtagcagccttatttataatagccagaagctgggaagaacccaga
tgtccctcaacagaggaatggatacaaaaaaatgtggtaatttatacaat
ggagtactactcagctattaaaaacaatgaatttatgaaattcttacgca
aatggatgtatctggaggatatcatcctgagtgaggtaacccaatcacaa
aagaactcacttgatatgcactcattgataagtggatattagtccagaaa
cctagaatacccaagaaacaatttccaaaacacaagaaaaacaagaagga
aaacaaactcgtgaatacttcattcctctctcgaatagggaataacatac
ccatggaaggagttgcagagacaaagtttggagcaaagatgaaagaatgg
accatccagagactgccccacccaggggtccatcccataatgagccacta
aacctagacactattgcatatgccagcaagatcttgctgaaaggaccctg
atatagccgtcctcctgtgagactatgccagtgcctggcaaatacagaag
tggatgctcacagtcatctataggatggatacagggccccagtgaggagc
tagagaagtacacagagatgaggggtctgcaccttatagtgaacagaata
tgactaccagtaccccagagctcgtgtctctagctgcatatgtagcaagg
atggctactcagcatcatggaagggagacccttgctagcaactttatgtc
cagtacaggactcaggcagaatggagatggtggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_117998469_117999527
seq2: B6Ng01-063L13.b_47_1099

seq1  GAATTCTCCATACTTTATAGACGCATATCATGTGATATTTTCTCTAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATACTTTATAGACGCATATCATGTGATATTTTCTCTAATAT  50

seq1  AAAAATCCTAACATTATTTTCAATAATAGCTAATTCCCATCTCCACCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCCTAACATTATTTTCAATAATAGCTAATTCCCATCTCCACCCTC  100

seq1  TTTTTCATGTCCCCAACCCCCACCCCCAGGACTGCATCACACACATTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATGTCCCCAACCCCCACCCCCAGGACTGCATCACACACATTCTA  150

seq1  CTCACTAACAGCATACTGTGATAAAGGTAAATGCAAAGGCAGATTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTAACAGCATACTGTGATAAAGGTAAATGCAAAGGCAGATTTTATG  200

seq1  ACATTGTTTTCCAAGCACAACAAAAAAAAAACATTATATAAAAAAACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGTTTTCCAAGCACAACAAAAAAAAAACATTATATAAAAAAACCCA  250

seq1  TGTGCTGGACAGTGGTGGTGCAGACCTTTAAACCTAGGACTCAGGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGGACAGTGGTGGTGCAGACCTTTAAACCTAGGACTCAGGAGACA  300

seq1  AGAGGCAGGCAGATCTCTGATTTCAGGGCTAGCCTAGTCTACAGAATGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGGCAGATCTCTGATTTCAGGGCTAGCCTAGTCTACAGAATGAG  350

seq1  TTCAAGGACAGCCAAGTCTACACAGAAAACCTTTTTCTGTCTCGGAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGGACAGCCAAGTCTACACAGAAAACCTTTTTCTGTCTCGGAAACA  400

seq1  AAGCAAAACTGAATCCACGTGCAGGGCATGGTGGCACATGACTTTAATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAACTGAATCCACGTGCAGGGCATGGTGGCACATGACTTTAATCT  450

seq1  GGGCATTTGGGAGGCAAACGGAGGCAGATCTGTATGAGTTTAAGGTCGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTTGGGAGGCAAACGGAGGCAGATCTGTATGAGTTTAAGGTCGAT  500

seq1  CTGGTCAACATAGTGCATTTCAAGCCAGTCAGAGTTACATGGTACTATAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCAACATAGTGCATTTCAAGCCAGTCAGAGTTACATGGTACTATAG  550

seq1  TTAGAGTTTGTTTCTCTCTCTCTCTCTCTTTTTGTAATTTATTTATTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGTTTGTTTCTCTCTCTCTCTCTCTTTTTGTAATTTATTTATTTAT  600

seq1  TATATGTATGTAAATACACTGTAGCTGTTTTCAGACACACCAGAAGAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTATGTAAATACACTGTAGCTGTTTTCAGACACACCAGAAGAGGG  650

seq1  AGTCTGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGATCTCATTACAGATGGTTGTGAGCCACCATGTGGTTGCAGGGAT  700

seq1  TTGAACTCAGGACCTTTGGAAGAGCAGTCAGTACTCTTAACCGCTGAGCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGGACCTTTGGAAGAGCAGTCAGTACTCTTAACCGCTGAGCC  750

seq1  ATCTCTCCAGCCTGAGTTTGTTTCTCTTGATGCAAGGAAATATTATGATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCCAGCCTGAGTTTGTTTCTCTTGATGCAAGGAAATATTATGATC  800

seq1  AAAAAACAAGCTGGGGAGAAAGGGTTTATTTCGATTACACTTCCATATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAAGCTGGGGAGAAAGGGTTTATTTCGATTACACTTCCATATCA  850

seq1  CTGTTCATCACCAGGAGGAACTCAAGCAGGGAAGGAACTTGGAGGCAGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCATCACCAGGAGGAACTCAAGCAGGGAAGGAACTTGGAGGCAGGA  900

seq1  GCTGATGCAGAGACCACAGGGAGGGGCTGCTTACTGGCTTGCTCTATATG  950
      |||||||||||||||||||||| ||||||| |||||||||||||||||||
seq2  GCTGATGCAGAGACCACAGGGA-GGGCTGC-TACTGGCTTGCTCTATATG  948

seq1  CCTTAGTCAGTTTGCTTTCTTATAGAACCCAGGACCACCCTCTCAGAGGT  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||| ||
seq2  CCTTAGTCAGTTTGCTTTCTTATAGAACCCAGGACCATCCTCTCAGAAGT  998

seq1  GGCACCACCCACAACGGGCTGGGCCCTCCTCCATTGATCACTAATAAAGA  1050
      |||||   ||||||||||||||| |||||| || ||||||||||||||||
seq2  GGCAC--ACCACAACGGGCTGGG-CCTCCT-CAATGATCACTAATAAAGA  1044

seq1  AAATGCCTC  1059
      |||||||||
seq2  AAATGCCTC  1053