BAC Information

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BAC

Clone NameB6Ng01-063M19
Chromosome13 (Build37)
Map Location 111,999,309 - 112,086,945
singlet/doubletdoublet
Overlap gene4732495G21Rik
Upstream geneRab3c, EG432803, 9830130M13Rik, Plk2, LOC100040614, LOC668159
Downstream geneLOC100040640, EG621953, Gpbp1, LOC100040666, Mier3, Map3k1, LOC668181, LOC100040716, LOC100041161, LOC100041175, Ankrd55
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063M19.bB6Ng01-063M19.g
ACCDH883782DH883783
length2521,091
definitionDH883782|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M19, 5' end.DH883783|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,999,309 - 111,999,560)(112,085,842 - 112,086,945)
sequence
attcaactttgaattagtgtcctgagtacaccacacaccaagatcataca
gaatggtttagctaacacacccaatgtctgcatgtgttggttaaatgata
ccaccctctatttaaagcattcctcaagaacacactaaaatgaaatccag
cgattgtgctttctgaaagtcagcgaatagctttggtaaagtaaaaaaaa
aaaaaaaagagaaagaaagagagagagagagggaaggagggagggaggga
gg
gaattcctccctgtgttctagacagtagacttccatacaactttagtgca
aaataatggtgcagaagtcttaaattaattaacatttcaaatttctgaga
ccactgacaatacaattttatttgcctcgggggtataactgaagaaacag
atatgtatcgcagagaccactaattcaaaaagcagctttaaccccaactg
tctgtaggataggtcatggaggttttgtttctttcttcagttaagaaaat
gagccccagaagctgaagggttccctaaagagaatggcagagctatgttc
ataatcaggtttcctgtgtctcaaatttatgttgatggtctattgtactc
aagtctatgaaacatggacttcaataggtccatggggacgtttgagtcat
ttcccataaagatcaaccctcacttttggaactgtgctggccaagctttg
ttctgtatgcatgtgcagcttatcacagtggcttgtgtttctgttgctct
tttctctgagaaaggccaggcgtgttttagatactcgtgtctaatcagct
ctgatagcaggttattgacacagaggaccgtgaggcttgtttggcacttg
cctgtgactgtgaggtcacctgctccttctggtgttcctggagcaagtgt
gggcctctgacctgccactgctggtatgtgctgttggttttctcttgtcc
ttaaaatcgtgctcacatgtccctggctgctgatgccttggtggtcaccc
cgttcatgcagattgatcagaataggagcacacacttgtcttactcttca
gtttctactggacagcatcactttgatccctagatctaacttattttgtt
ccaggacctctcagatttcatttctattgaaataatctacctattcattg
cagttcagtggattttttgtcccctcttcacccctaaatatagcaagaaa
gctcttcttttcacaccccctaccctgctatcttattcatcactttcctc
tttcagtgtcagctgcttcttgtttgattgatcactccccatgtatattt
gccctgacctcagtagcttatacatgttcattcatatgatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_111999309_111999560
seq2: B6Ng01-063M19.b_52_303

seq1  ATTCAACTTTGAATTAGTGTCCTGAGTACACCACACACCAAGATCATACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAACTTTGAATTAGTGTCCTGAGTACACCACACACCAAGATCATACA  50

seq1  GAATGGTTTAGCTAACACACCCAATGTCTGCATGTGTTGGTTAAATGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGTTTAGCTAACACACCCAATGTCTGCATGTGTTGGTTAAATGATA  100

seq1  CCACCCTCTATTTAAAGCATTCCTCAAGAACACACTAAAATGAAATCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTCTATTTAAAGCATTCCTCAAGAACACACTAAAATGAAATCCAG  150

seq1  CGATTGTGCTTTCTGAAAGTCAGCGAATAGCTTTGGTAAAGTAAAAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTGTGCTTTCTGAAAGTCAGCGAATAGCTTTGGTAAAGTAAAAAAAA  200

seq1  AAAAAAAAGAGAAAGAAAGAGAGAGAGAGAGGGAAGGAGGGAGGGAGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAGAAAGAAAGAGAGAGAGAGAGGGAAGGAGGGAGGGAGGGA  250

seq1  GG  252
      ||
seq2  GG  252

seq1: chr13_112085842_112086945
seq2: B6Ng01-063M19.g_68_1158 (reverse)

seq1  AATCATATGAAATGAACATGTAAATAAAGCTACTGAAGTCAGGGGCATAT  50
      ||||||||| ||||||||||||    |||||||||| |||| ||||| ||
seq2  AATCATATG-AATGAACATGTA---TAAGCTACTGAGGTCA-GGGCAAAT  45

seq1  ATACAATGGAGAAGTGATCAAATCAAACAAAGAAGCAGCCTGACCACTGA  100
      |||| |||| | ||||||| |||||||| ||||||||| |||| ||||||
seq2  ATAC-ATGG-GGAGTGATC-AATCAAAC-AAGAAGCAG-CTGA-CACTGA  89

seq1  AAGAGGAAAGTTGATGAAATAAGATAGCAGGGTAGGGGGTGTGAAAAAGA  150
      |||||||||| ||||| |||||||||||||||||||||||||| ||||||
seq2  AAGAGGAAAG-TGATG-AATAAGATAGCAGGGTAGGGGGTGTG-AAAAGA  136

seq1  AGAGCTTTCTTGCTATATTTAGGGGTG-AGAGGGGACAAAAAAATCACTG  199
      ||||||||||||||||||||||||||| |||||||||||||||  |||||
seq2  AGAGCTTTCTTGCTATATTTAGGGGTGAAGAGGGGACAAAAAATCCACTG  186

seq1  AACTGCAATGAATAGGTAGATTATTTCAATAGAAATGAAATCTGAGAGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAATGAATAGGTAGATTATTTCAATAGAAATGAAATCTGAGAGGT  236

seq1  CCTGGAACAAAATAAGTTAGATCTAGGAATCAAAGTGATGCTGTCCAGTA  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTGGAACAAAATAAGTTAGATCTAGGGATCAAAGTGATGCTGTCCAGTA  286

seq1  GAAACTGAAGAGTAAGACAAGTGTGTGCTCCTATTCTGATCAATCTGCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTGAAGAGTAAGACAAGTGTGTGCTCCTATTCTGATCAATCTGCAT  336

seq1  GAACGGGGTGACCACCAAGGCATCAGCAGCCAGGGACATGTGAGCACGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGGGGTGACCACCAAGGCATCAGCAGCCAGGGACATGTGAGCACGAT  386

seq1  TTTAAGGACAAGAGAAAACCAACAGCACATACCAGCAGTGGCAGGTCAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGACAAGAGAAAACCAACAGCACATACCAGCAGTGGCAGGTCAGA  436

seq1  GGCCCACACTTGCTCCAGGAACACCAGAAGGAGCAGGTGACCTCACAGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACACTTGCTCCAGGAACACCAGAAGGAGCAGGTGACCTCACAGTC  486

seq1  ACAGGCAAGTGCCAAACAAGCCTCACGGTCCTCTGTGTCAATAACCTGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCAAGTGCCAAACAAGCCTCACGGTCCTCTGTGTCAATAACCTGCT  536

seq1  ATCAGAGCTGATTAGACACGAGTATCTAAAACACGCCTGGCCTTTCTCAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGCTGATTAGACACGAGTATCTAAAACACGCCTGGCCTTTCTCAG  586

seq1  AGAAAAGAGCAACAGAAACACAAGCCACTGTGATAAGCTGCACATGCATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAGCAACAGAAACACAAGCCACTGTGATAAGCTGCACATGCATA  636

seq1  CAGAACAAAGCTTGGCCAGCACAGTTCCAAAAGTGAGGGTTGATCTTTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAAAGCTTGGCCAGCACAGTTCCAAAAGTGAGGGTTGATCTTTAT  686

seq1  GGGAAATGACTCAAACGTCCCCATGGACCTATTGAAGTCCATGTTTCATA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAATGACTCAAACGTCCCCATGGACCTATTGAAGTCCATGTTTCATA  736

seq1  GACTTGAGTACAATAGACCATCAACATAAATTTGAGACACAGGAAACCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAGTACAATAGACCATCAACATAAATTTGAGACACAGGAAACCTG  786

seq1  ATTATGAACATAGCTCTGCCATTCTCTTTAGGGAACCCTTCAGCTTCTGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAACATAGCTCTGCCATTCTCTTTAGGGAACCCTTCAGCTTCTGG  836

seq1  GGCTCATTTTCTTAACTGAAGAAAGAAACAAAACCTCCATGACCTATCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCATTTTCTTAACTGAAGAAAGAAACAAAACCTCCATGACCTATCCT  886

seq1  ACAGACAGTTGGGGTTAAAGCTGCTTTTTGAATTAGTGGTCTCTGCGATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACAGTTGGGGTTAAAGCTGCTTTTTGAATTAGTGGTCTCTGCGATA  936

seq1  CATATCTGTTTCTTCAGTTATACCCCCGAGGCAAATAAAATTGTATTGTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATCTGTTTCTTCAGTTATACCCCCGAGGCAAATAAAATTGTATTGTC  986

seq1  AGTGGTCTCAGAAATTTGAAATGTTAATTAATTTAAGACTTCTGCACCAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCTCAGAAATTTGAAATGTTAATTAATTTAAGACTTCTGCACCAT  1036

seq1  TATTTTGCACTAAAGTTGTATGGAAGTCTACTGTCTAGAACACAGGGAGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGCACTAAAGTTGTATGGAAGTCTACTGTCTAGAACACAGGGAGG  1086

seq1  AATTC  1104
      |||||
seq2  AATTC  1091