BAC Information

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BAC

Clone NameB6Ng01-063N01
Chromosome13 (Build37)
Map Location 87,886,919 - 87,888,158
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC675707, LOC667230, EG435375
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063N01.bB6Ng01-063N01.g
ACCDH883792DH883793
length1,243566
definitionDH883792|Mus musculus domesticus DNA, BAC clone: B6Ng01-063N01, 5' end.DH883793|Mus musculus domesticus DNA, BAC clone: B6Ng01-063N01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccctatttagttctatacctcattttttgactgggttatttaatt
tttggaggttatcttcttgagctctttatatattttggatattagcccta
tatcaggtgtgtgattaataattatatttttcctaatctggaatttaaga
tgcttgcattgttgccgatttttcctactgactatgttctttgccttaca
gaagcttttcagtttcatagggtcctgtttatcatttctagatcttagac
cgtgagccatgagtattctgtttaggatatttttccctgagccaatgagt
ttgagactctcttccaccttctcatctatcagattcagtgcatctggttt
tatgttgaggttcttgatccaattggactttatctttgtggaaggtgaca
aatatggatcttctttttatttttctccatacagactgccagttatacca
gctccattgattgaagatgctttgctttttccattgtatttctggaatac
ccttaaatagtatttaggaaaaaaattgcagtatccacagaaattgtgaa
tgagagattaaataacagagaacatcatgaatatgtaaaaagagaaccta
tatttgtgtgagctctgctcattatcactattacctatagtgatatgaac
attgaaaaaggtactgttactttatctccagagttctcaaatgaggtaca
caacataccaaatagtttcctattgttttcatgataaacatgaaaagaaa
gtaaccaaacaataaaagatgattcacgtatgaaaagttcttagaaaaat
ataaaggagctgtgaagtttaatcaaacttccttaacaaattagagtgat
ataggcatcaaatagaccataccagttatatctataatacggtttttaaa
taatagttgatgaacaagttctgtatttagatataatttttaatgtgata
aggcatacttatttgttcacacattattttcatctgtttctgtatttcaa
taaagctagttttttttcaaaaatactttggaatagaaagtatcatcaac
tacctttaacctcctaagaaaattctggaagctctggtgagtgaaaaaaa
aaattacattttataccttctaataaggaaaaaaaagtcttttgattcct
tagccatttggttgaaagacaaatatccccaccctaaagaagagaagaaa
tgtttaatatatccatagatataggtgttatcttaaattggag

tttgttcagctctgagccccatttattaatggggttatttgattttctgg
agtgaactaaccagtaccccggagctcttgtctctagctgcatatgcatc
aaaagatggcctagtcggccatcactgcaaagagaggcccattggacttg
ccaactttagatgccccagtacaggggaacgccagggccaaaaaggggga
gtgggtgggcaggggattttgggggtgaatatgggggacctttgggatag
cattgaaaatgtaaacgaggaaaatacctaataaaaaaattaaaaaaaaa
aaaaaagaatttgcactttctccaggccatgtgcttctgctccacttttc
tttttcttcctcctcctctgtgtcctctccctcttcccttttctcttttc
ttctctcccccaccttctgttccaccttcccttttatctgcccaatcatc
agctctcctttattttacaatttaaggcaggaagcaggtttacaggaaat
cacatgagtgctgactcatctcttgttcacaaacactcataggagactgg
aaataacatcaaatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_87886919_87888158
seq2: B6Ng01-063N01.b_44_1286 (reverse)

seq1  CTCCA--TTTAGATAACAGCTATATCTATTGATATATTTAAACCCATCCT  48
      |||||  || |||||||| |||||||||| ||||||||  || |  | ||
seq2  CTCCAATTTAAGATAACACCTATATCTATGGATATATT--AAACATTTCT  48

seq1  TCTC-TCTATAGGGTGTTGGGATA-TTGTCTTTTCAACCAAATTGCTAA-  95
      |||| ||| |||||||  |||||| ||||| |||||||||||| ||||| 
seq2  TCTCTTCTTTAGGGTG--GGGATATTTGTC-TTTCAACCAAATGGCTAAG  95

seq1  GAATCAAAGAACTTTTTTT--CTTAATAGAAGTGATAAAATGTAAATAAT  143
      ||||||||  |||||||||  |||| ||||||  ||||||||||| |  |
seq2  GAATCAAAAGACTTTTTTTTCCTTATTAGAAGGTATAAAATGTAATTTTT  145

seq1  TTTTTC-TACATCA-AGACTGCAGAATTTTTCTTA-GAGGTTAAAGGTAG  190
      ||||||   || || ||  | ||||| |||||||| ||||||||||||||
seq2  TTTTTCACTCACCAGAGCTTCCAGAA-TTTTCTTAGGAGGTTAAAGGTAG  194

seq1  -TGATGATAC-TTCTATTCCATAGTATTTTTGAAAAAAAAACTAGCTCTA  238
       ||||||||| |||||||||| |||||||||| |||||||||||||| ||
seq2  TTGATGATACTTTCTATTCCAAAGTATTTTTG-AAAAAAAACTAGCTTTA  243

seq1  TTGAAATACAGAAACAGATGAAAATAATGTGTGAACAAATAAGTATGCCC  288
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTGAAATACAGAAACAGATGAAAATAATGTGTGAACAAATAAGTATG-CC  292

seq1  TTATCACATTAAAAATTATATCTAAATACAGAACTTGTTCATCAACTATT  338
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACATTAAAAATTATATCTAAATACAGAACTTGTTCATCAACTATT  342

seq1  ATTTTAAAAACCCTATTATAGATATAACTGGTATGGTCTATTTGATGCCT  388
      | |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  A-TTTAAAAACCGTATTATAGATATAACTGGTATGGTCTATTTGATGCCT  391

seq1  ATATCACTCTAATTTGTTAAGGAAGTTTGATTAAACTTCACAGCTCCTTT  438
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACTCTAATTTGTTAAGGAAGTTTGATTAAACTTCACAGCTCCTTT  441

seq1  ATATTTTTCTAAGAACTTTTCATACGTGAATCATCTTTTATTGTTTGGTT  488
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTCTAAGAACTTTTCATACGTGAATCATCTTTTATTGTTTGGTT  491

seq1  ACTTTCTTTTCATGTTTATCATGAAAACAATAGGAAACTATTTGGTATGT  538
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTTTCATGTTTATCATGAAAACAATAGGAAACTATTTGGTATGT  541

seq1  TGTGTACCTCATTTGAGAACTCTGGAGATAAAGTAACAGTACCTTTTTCA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTACCTCATTTGAGAACTCTGGAGATAAAGTAACAGTACCTTTTTCA  591

seq1  ATGTTCATATCACTATAGGTAATAGTGATAATGAGCAGAGCTCACACAAA  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCATATCACTATAGGTAATAGTGATAATGAGCAGAGCTCACACAAA  641

seq1  TATAGGTTCTCTTTTTACATATTCATGATGTTCTCTGTTATTTAATCTCT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTTCTCTTTTTACATATTCATGATGTTCTCTGTTATTTAATCTCT  691

seq1  CATTCACAATTTCTGTGGATACTGCAATTTTTTTCCTAAATACTATTTAA  738
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACAATTTCTGTGGATACTGCAATTTTTTTCCTAAATACTATTTAA  741

seq1  GGGTATTCCAGAAATACAATGGAAAAAGCAAAGCATCTTCAATCAATGGA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTCCAGAAATACAATGGAAAAAGCAAAGCATCTTCAATCAATGGA  791

seq1  GCTGGTATAACTGGCAGTCTGTATGGAGAAAAATAAAAAGAAGATCCATA  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTATAACTGGCAGTCTGTATGGAGAAAAATAAAAAGAAGATCCATA  841

seq1  TTTGTCACCTTCCACAAAGATAAAGTCCAATTGGATCAAGAACCTCAACA  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACCTTCCACAAAGATAAAGTCCAATTGGATCAAGAACCTCAACA  891

seq1  TAAAACCAGATGCACTGAATCTGATAGATGAGAAGGTGGAAGAGAGTCTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCAGATGCACTGAATCTGATAGATGAGAAGGTGGAAGAGAGTCTC  941

seq1  AAACTCATTGGCTCAGGGAAAAATATCCTAAACAGAATACTCATGGCTCA  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATTGGCTCAGGGAAAAATATCCTAAACAGAATACTCATGGCTCA  991

seq1  CGGTCTAAGATCTAGAAATGATAAACAGGACCCTATGAAACTGAAAAGCT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTAAGATCTAGAAATGATAAACAGGACCCTATGAAACTGAAAAGCT  1041

seq1  TCTGTAAGGCAAAGAACATAGTCAGTAGGAAAAATCGGCAACAATGCAAG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAGGCAAAGAACATAGTCAGTAGGAAAAATCGGCAACAATGCAAG  1091

seq1  CATCTTAAATTCCAGATTAGGAAAAATATAATTATTAATCACACACCTGA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTAAATTCCAGATTAGGAAAAATATAATTATTAATCACACACCTGA  1141

seq1  TATAGGGCTAATATCCAAAATATATAAAGAGCTCAAGAAGATAACCTCCA  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGGCTAATATCCAAAATATATAAAGAGCTCAAGAAGATAACCTCCA  1191

seq1  AAAATTAAATAACCCAGTCAAAAAATGAGGTATAGAACTAAATAGGGAAT  1238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATTAAATAACCCAGTCAAAAAATGAGGTATAGAACTAAATAGGGAAT  1241

seq1  TC  1240
      ||
seq2  TC  1243


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