BAC Information

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BAC

Clone NameB6Ng01-064O03
Chromosome13 (Build37)Y (Build37)
Map Location 78,270,766 - 78,271,8001,870,346 - 1,870,465
singlet/doubletsingletsinglet
Overlap gene1110033M05Rik
Upstream gene2210408I21Rik, LOC631139, LOC675063, D13Mgi7, 1700013G10Rik
Downstream geneNr2f1, EG666856, LOC268676, LOC100042683, LOC622365, LOC100043052, EG666883
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064O03.bB6Ng01-064O03.g
ACCDH884537DH884538
length1,053406
definitionDH884537|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O03, 5' end.DH884538|Mus musculus domesticus DNA, BAC clone: B6Ng01-064O03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(78,270,766 - 78,271,800)(1,870,346 - 1,870,465)
sequence
gaattctctgtttagctctgtaccccatttttaattgggttattttgggt
tttttggaagttagcttcctgagttctttaaatattttggttattaggcc
cctgtcagatgtagggttagtgaaaatttttttcccagtcacctgcaggt
tgctgttgatggtgtctttggtcttatagaagcttttcagcttcatgaga
tcccatttattgattgtttgtcttagagcctgagttcttcacacattgta
atactattcagctgttaaaaacatggacatcatgaattttgtaggcaaat
gcatgaaactagaaaatatcatcctgagtgaggtaactcagacccaaaag
gacatgcatggtatgtactcgctgataagtggatattagcctaaaagtac
agaatacctaggacacaacccacagaccataagaaatgtaacaagtagaa
aggcccaagtgaggatgttttaaatccaattagaagggggacagaaataa
tcatgggaggcagagggttacctgtgctcttttgctacatttgtactgtt
agttcagtaggttactctgtgaggtcctcatgtggaaaacaatactcact
ctgccttaaaaagagagaattaagacaacaaagtttaaaagcttacccag
aattgcaagcatattggtagaggagccaaaaatagaacttaatcattaag
tctctcagttcagctgtgtacactatttctaagccctcagcataagtata
tgtagttaattgtacattttctaatgagtttggggaaattatcatagtta
aatataagtctcaaatattttggaaactttagctactgatttcagtcttc
tgtatcaaacatcttactaaaactcctagcaagtacaaaatttgcctggg
tttaattttactacagttaaccctccaaggaccaccatcaaagagcagta
aggctcgcactgacatagcaaatggtttctttctttactgcttgtcagtt
tctttatatacaggacccagtccaacaaatggaatttatatagttattca
ctg
tttgttcagttctgagccccattttttaagggggttatttgattttctga
ggtccaccttcttgagttctttatatatgttggatattagtcccctatct
gatttaggataggtaaagatcctttcccagtctgttggtggtctttttgt
cttatagacagtgtcttttgccttgcagaaactttggagtttcattaggt
cccatttgtcaattctcgatcttacagcacaagccattgctgttctgtca
gctaatggatggatcacagggctcccaatggaggagctacagaaagtatc
caaggagctaaaaggatcttcaaccctataggtggaacaacattatgaac
tttcctttacccctgagctcttgactctagctgtatatgtatcaaaatat
ggccta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_78270766_78271800
seq2: B6Ng01-064O03.b_68_1100

seq1  TACCCCATTTTTAATTGGGTTATTTTGGGTTTTTTGGAAGTTAGCTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCATTTTTAATTGGGTTATTTTGGGTTTTTTGGAAGTTAGCTTCCT  50

seq1  GAGTTCTTTAAATATTTTGGTTATTAGGCCCCTGTCAGATGTAGGGTTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCTTTAAATATTTTGGTTATTAGGCCCCTGTCAGATGTAGGGTTAG  100

seq1  TGAAAATTTTTTTCCCAGTCACCTGCAGGTTGCTGTTGATGGTGTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAATTTTTTTCCCAGTCACCTGCAGGTTGCTGTTGATGGTGTCTTTG  150

seq1  GTCTTATAGAAGCTTTTCAGCTTCATGAGATCCCATTTATTGATTGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTATAGAAGCTTTTCAGCTTCATGAGATCCCATTTATTGATTGTTTG  200

seq1  TCTTAGAGCCTGAGTTCTTCACACATTGTAATACTATTCAGCTGTTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGAGCCTGAGTTCTTCACACATTGTAATACTATTCAGCTGTTAAAA  250

seq1  ACATGGACATCATGAATTTTGTAGGCAAATGCATGAAACTAGAAAATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGACATCATGAATTTTGTAGGCAAATGCATGAAACTAGAAAATATC  300

seq1  ATCCTGAGTGAGGTAACTCAGACCCAAAAGGACATGCATGGTATGTACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGTGAGGTAACTCAGACCCAAAAGGACATGCATGGTATGTACTC  350

seq1  GCTGATAAGTGGATATTAGCCTAAAAGTACAGAATACCTAGGACACAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATAAGTGGATATTAGCCTAAAAGTACAGAATACCTAGGACACAACC  400

seq1  CACAGACCATAAGAAATGTAACAAGTAGAAAGGCCCAAGTGAGGATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACCATAAGAAATGTAACAAGTAGAAAGGCCCAAGTGAGGATGTTT  450

seq1  TAAATCCAATTAGAAGGGGGACAGAAATAATCATGGGAGGCAGAGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCAATTAGAAGGGGGACAGAAATAATCATGGGAGGCAGAGGGTTA  500

seq1  CCTGTGCTCTTTTGCTACATTTGTACTGTTAGTTCAGTAGGTTACTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTCTTTTGCTACATTTGTACTGTTAGTTCAGTAGGTTACTCTGT  550

seq1  GAGGTCCTCATGTGGAAAACAATACTCACTCTGCCTTAAAAAGAGAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCTCATGTGGAAAACAATACTCACTCTGCCTTAAAAAGAGAGAAT  600

seq1  TAAGACAACAAAGTTTAAAAGCTTACCCAGAATTGCAAGCATATTGGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAACAAAGTTTAAAAGCTTACCCAGAATTGCAAGCATATTGGTAG  650

seq1  AGGAGCCAAAAATAGAACTTAATCATTAAGTCTCTCAGTTCAGCTGTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCCAAAAATAGAACTTAATCATTAAGTCTCTCAGTTCAGCTGTGTA  700

seq1  CACTATTTCTAAGCCCTCAGCATAAGTATATGTAGTTAATTGTACATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATTTCTAAGCCCTCAGCATAAGTATATGTAGTTAATTGTACATTTT  750

seq1  CTAATGAGTTTGGGGAAATTATCATAGTTAAATATAAGTCTCAAATATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGTTTGGGGAAATTATCATAGTTAAATATAAGTCTCAAATATTT  800

seq1  TGGAAACTTTAGCTACTGATTTCAGTCTTCTGTATCAAACATCTTACTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACTTTAGCTACTGATTTCAGTCTTCTGTATCAAACATCTTACTAA  850

seq1  AACTCCTAGCAAGTACAAAATTTGCCTGGTTTTAATTTTACTACAGTTAA  900
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AACTCCTAGCAAGTACAAAATTTGCCTGGGTTTAATTTTACTACAGTTAA  900

seq1  CCCTCCAAGGACCACCATCAAAAGAGCAGTAAGGCTCGCACTGACATAGC  950
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCTCCAAGGACCACCATC-AAAGAGCAGTAAGGCTCGCACTGACATAGC  949

seq1  AAATGGTTTCTTTCTTTACTGCTTGTCAGTTTCTTTATATACAAGACCCA  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAATGGTTTCTTTCTTTACTGCTTGTCAGTTTCTTTATATACAGGACCCA  999

seq1  GT-CAACAAATGAGAATTTAATATAGTTATTCACTG  1035
      || ||||||||| |||||| ||||||||||||||||
seq2  GTCCAACAAATG-GAATTT-ATATAGTTATTCACTG  1033

seq1: chrY_1870346_1870465
seq2: B6Ng01-064O03.g_359_478

seq1  CTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGA  50
      ||| |||||||| ||||||||||||| |||||| ||||||||||||||||
seq2  CTACAGAAAGTATCCAAGGAGCTAAAAGGATCTTCAACCCTATAGGTGGA  50

seq1  ACAACATTATGAACTAACCATTACCCCTGAGCTCTTGACTCTTGCTGCAT  100
      |||||||||||||||  || |||||||||||||||||||||| |||| ||
seq2  ACAACATTATGAACTTTCCTTTACCCCTGAGCTCTTGACTCTAGCTGTAT  100

seq1  AGGTATCAAAAGATGGCCTA  120
      | ||||||||| ||||||||
seq2  ATGTATCAAAATATGGCCTA  120