BAC Information

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BAC

Clone NameB6Ng01-065D02
Chromosome13 (Build37)
Map Location 89,486,813 - 89,487,353
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667230, EG435375, Edil3
Downstream geneHapln1, EG667266, Vcan, LOC100042940, Xrcc4, Tmem167, LOC100043170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D02.bB6Ng01-065D02.g
ACCDH884742DH884743
length5351,069
definitionDH884742|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D02, 5' end.DH884743|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
cattacagattgttgtgagtcaccatgtggttgttgggaaccaggaccac
tgtaagagaagccagtgctattaactgctgagccatctatccaacccttt
tgctattgtttgaaggttgttttgttccttagtttctgtttcctctttgg
tcttctagtctttgtgatctatatttctggtggccaccattacctctgct
ccagcagaaagtctccaccagagttgaagttgtatttctcatagttagca
ttgcctttggtccagtaggggctctctgctcttctgaatggcctggtctg
ttcatgagcagtgggtatctccctgtgtaagcgtggggtcactgcagcaa
ggtcagttggtggtagtatcccgtggtgttgacagcagtttggctctttc
agctccaagccaagagagtgaggggatttagagggaggaaggggctctta
gctattctggctggtatgacttgtacctgggcagtggttttccaccctag
atgggtgtaggggcaggttggggaagaaggagggt
gaattcatggctacacagcaggagggattggtgttgatgtccatggttga
tattaccactgtagaaaacacggggatgtctctggtcagttcagccacca
gggaccacatgaatgtccaggagctgtgtagaactaactctgccccttac
cggatgctgtgatctagaaatgtgccacacctctcattagcatctgcatt
gaagaaagcaggttctacatctaaccaaggcaggagagtggagctggcca
tggtggcaagggtggatgagcaagccccaagctgacttccaactagccta
ccatgggatggcacaggcacagagatgatatgccttccctcttttcacta
ctgtcattcaggaaagcttccgacaggatcttgagttcaggggagctaga
agtacccatcaccaggtacaatgctcaggaaagtaggctctgcactttac
ccaaacagcacagtagagctgaccctggtggcaggaagaacagtcttgag
ggggagagtgtgggagagctggccctgacactcttcagcagtaaggtggc
ctggttgcatgggtggcagcagtcaggagagctggctcatgaaagcatat
gagctggccctattcatccccacctgcagaactttgttgagtgggccctg
catctcacctgagcaccacagtagtgctggccctggtcaaaggaaaacag
gtgagtcaccccaaggacagagagagggagagatgagcccaccacccatt
tactgtgaggtgctataggtctagcgatctggccctggggctatgaaggt
agatgagctggtccttcccatgggcagttgcagcacttggaagagtggcc
ctacacttctgagcagcacagtagagctgactctggtattaagcagttgg
ttacaggcaagccagcctgacagatctggggatagtgacccactactcct
ctactatgagatggtctggagggaagtccctctgccccctcttcctttcc
ccctgaacatgttgggagatgtacccggggtcagagataatgactggcct
actctgactagagcgactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_89486813_89487353
seq2: B6Ng01-065D02.b_45_585 (reverse)

seq1  ACCCTCCTTCTTCCCCAACCTGCCCCTACACCCATCTAGGGTGGAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCCTTCTTCCCCAACCTGCCCCTACACCCATCTAGGGTGGAAAACC  50

seq1  ACTGCCCAGGTACAAGTCATACCAGCCAGAATAGCTAAGAGCCCCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCCAGGTACAAGTCATACCAGCCAGAATAGCTAAGAGCCCCTTCCT  100

seq1  CCCTCTAAATCCCCTCACTCTCTTGGCTTGGAGCTGAAAGAGCCAAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCTAAATCCCCTCACTCTCTTGGCTTGGAGCTGAAAGAGCCAAACTG  150

seq1  CTGTCAACACCACGGGATACTACCACCAACTGACCTTGCTGCAGTGACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAACACCACGGGATACTACCACCAACTGACCTTGCTGCAGTGACCC  200

seq1  CACGCTTACACAGGGAGATACCCACTGCTCATGAACAGACCAGGCCATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTTACACAGGGAGATACCCACTGCTCATGAACAGACCAGGCCATTC  250

seq1  AGAAGAGCAGAGAGCCCCTACTGGACCAAAGGCAATGCTAACTATGAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGCAGAGAGCCCCTACTGGACCAAAGGCAATGCTAACTATGAGAA  300

seq1  ATACAACTTCAACTCTGGTGGAGACTTTCTGCTGGAGCAGAGGTAATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTTCAACTCTGGTGGAGACTTTCTGCTGGAGCAGAGGTAATGGT  350

seq1  GGCCACCAGAAATATAGATCACAAAGACTAGAAGACCAAAGAGGAAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCAGAAATATAGATCACAAAGACTAGAAGACCAAAGAGGAAACAG  400

seq1  AAACTAAGGAACAAAACAACCTTCAAACAATAGCAAAAGGGTTGGATAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGGAACAAAACAACCTTCAAACAATAGCAAAAGGGTTGGATAGA  450

seq1  TGGCTCAGCAGTTAATAGCACTGGCTTCTCTTACAGTGGTCCTGGTTCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAGCAGTTAATAGCACTGGCTTCTCTTACAGTGGTCCTGGTTCCC  500

seq1  AACAACCACATGGTGACTCACAACAATCTGTAATGGAATTC  541
      |||||||||||||||||||||||||||||||||||||||||
seq2  AACAACCACATGGTGACTCACAACAATCTGTAATGGAATTC  541