BAC Information

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BAC

Clone NameB6Ng01-065D08
Chromosome13 (Build37)
Map Location 15,833,861 - 15,834,435
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665099, LOC670994, EG625121, Gli3
Downstream geneLOC665157, Inhba, LOC625181, LOC665191
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D08.bB6Ng01-065D08.g
ACCDH884751DH884752
length1,135571
definitionDH884751|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D08, 5' end.DH884752|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagctctgtaccccacttaatcaggttatttggttttc
tggagtctgaattcttaagttctttgtatattttggatattagccctcaa
ttagatgtatggttgggaaagatcttttcccaatctgtgagtttcagttt
tgctgtattgacaatgtcctttgccttacagaagcttttcatttttatga
gcaaacatttagcaattgttgatcttagagcataagccattggtgttcta
ttcagaaaatttttccctgtgccaatgtgttccaggttctttcccacttt
ctcttcaattagattcagcatatatggttttatgtggaggtcatttatgc
acttggaattgagctttgtagaaggagataagaatagatcaatttgcaat
tttctacatgctgactgccagttggaccaacaccttttgttgaaaattct
gccttttttctccccacttgaaggttttggcctctttgtcaaagatcaag
tgaccataggtgtgtagggtgatttctgggtcttcaattctattcaattg
atttacatgcctgtttctatactgatacccttccatttttatcactattg
ctttgagtacagcatgatatcagggatggtggttctccccaaaactctct
tattgttgagaatggttttcaatatcttgcttttatttttgttattccaa
atgaatatgataattgctctttctatctctgtgaagaattgagttggaaa
tttgatggagattgcattaaatctgtgaagacttcttatagtttaacaaa
aataaagacacaatataaccaaacttaggggacacaatgaaacagtgcta
agaagaaaactcatagatctgagtgtctccgtaaagaaattggagaaagc
atatattagtagcttaacagctcatctcaaagctctagaacaaagagcaa
atacacacagaggagtagatggtagggaattatcaaactcatggctgaaa
caaccagcagaaagaagagaacttaccataaatcaaccatccaggagctg
tttcctatgaaaaccacaaggtgaataacacttatctgactatccaaggg
gccaagcagattctcatttaccaaatccgtagata
cattgctgttagctggaaacaagcagccagctacctcccttctcttgctt
gctggctgaagcatggagctggagataagccagggatcttgggagagggg
aagaaaaggggggggggtctaagctgcttgtggccaagataagtctgtgg
ctggggtcctcagctgagttaagtcaagaaatatttttattttcatttga
acatgattcttatactcacaaatatttacccaaatcatacttggatatac
tgcccaaaagagattttttaaaaataagcagcaaatgggagacaagaaaa
ataatatctatgccatagctcaggaagagtctatattctgaataagagat
ttcctcccctgtaccttggatgctctggggtctctaggagtgatgctact
ggtctattgcctagccattctcaattccttaactcttaacagactatggt
gtccaggaagccaggtcccctgacacttcccatttgacccgcatccttct
aaacatgagatcatggaacatcgtgataaacttttcacttcaagtttaaa
acaaaagaatgaaaaccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr13_15833861_15834435
seq2: B6Ng01-065D08.g_68_644

seq1  GAATTCCATTGCTGTTAGCTGGAAACAAGCAGCCAGCTACCTCCCTTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTGCTGTTAGCTGGAAACAAGCAGCCAGCTACCTCCCTTCTC  50

seq1  TTGCTTGCTGGCTGAAGCATGGAGCTGGAGATAAGCCAGGGATCTTGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCTGGCTGAAGCATGGAGCTGGAGATAAGCCAGGGATCTTGGGA  100

seq1  GAGGGGAAGAAAAGGGGGGGGGGTCTAAGCTGCTTGTGGCCAAGATAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAAGAAAAGGGGGGGGGGTCTAAGCTGCTTGTGGCCAAGATAAGT  150

seq1  CTGTGGCTGGGGTCCTCAGCTGAGTTAAGTCAAGAAATATTTTTATTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGCTGGGGTCCTCAGCTGAGTTAAGTCAAGAAATATTTTTATTTTC  200

seq1  ATTTGAACATGATTCTTATACTCACAAATATTTACCCAAATCATACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAACATGATTCTTATACTCACAAATATTTACCCAAATCATACTTGG  250

seq1  ATATACTGCCCAAAAGAGATTTTTTAAAAATAAGCAGCAAATGGGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACTGCCCAAAAGAGATTTTTTAAAAATAAGCAGCAAATGGGAGACA  300

seq1  AGAAAAATAATATCTATGCCATAGCTCAGGAAGAGTCTATATTCTGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATAATATCTATGCCATAGCTCAGGAAGAGTCTATATTCTGAATA  350

seq1  AGAGATTTCCTCCCCTGTACCTTGGATGCTCTGGGGTCTCTAGGAGTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTCCTCCCCTGTACCTTGGATGCTCTGGGGTCTCTAGGAGTGAT  400

seq1  GCTACTGGTCTATTGCCTAGCCATTCTCAATTCCTTAACTCTTAACAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACTGGTCTATTGCCTAGCCATTCTCAATTCCTTAACTCTTAACAGAC  450

seq1  TATGGTGTCCAGGAAGCCAGGTCCCCTGACACTTCCCATTTGACCCGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTGTCCAGGAAGCCAGGTCCCCTGACACTTCCCATTTGACCCGCAT  500

seq1  CCTTCTAAACATGAGATCATGGAACATCGTGATAAACTTTTCACTTCAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAAACATGAGATCATGGAACATCGTGATAAACTTTTCACTTCAAG  550

seq1  TTTAAA--CAAAGAATGAAAACCAAAA  575
      ||||||   ||||||||||||||||||
seq2  TTTAAAACAAAAGAATGAAAACCAAAA  577